RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 EYA1Q99502 592 aa33.18■■■□□ 2.9
C1orf228-201ENST00000357508 KIF1AQ12756 1690 aa33.18■■■□□ 2.9
C1orf228-201ENST00000357508 ELL2O00472 640 aaPredicted RBP33.17■■■□□ 2.9
C1orf228-201ENST00000357508 HOXC9P31274 260 aa33.17■■■□□ 2.9
C1orf228-201ENST00000357508 ARHGAP45Q92619 1136 aa33.16■■■□□ 2.9
C1orf228-201ENST00000357508 MCM10Q7L590 875 aa33.15■■■□□ 2.9
C1orf228-201ENST00000357508 KRT28Q7Z3Y7 464 aa33.14■■■□□ 2.9
C1orf228-201ENST00000357508 CHL1O00533 1208 aa33.13■■■□□ 2.89
C1orf228-201ENST00000357508 ZBTB40Q9NUA8 1239 aa33.13■■■□□ 2.89
C1orf228-201ENST00000357508 CRB1P82279 1406 aa33.13■■■□□ 2.89
C1orf228-201ENST00000357508 MTHFSDQ2M296 383 aaKnown RBP33.12■■■□□ 2.89
C1orf228-201ENST00000357508 DDX17Q92841 729 aaKnown RBP33.12■■■□□ 2.89
C1orf228-201ENST00000357508 NFAT5O94916 1531 aa33.12■■■□□ 2.89
C1orf228-201ENST00000357508 PDZRN3Q9UPQ7 1066 aa33.11■■■□□ 2.89
C1orf228-201ENST00000357508 RTL1A6NKG5 1358 aa33.11■■■□□ 2.89
C1orf228-201ENST00000357508 HDAC1Q13547 482 aaPredicted RBP33.1■■■□□ 2.89
C1orf228-201ENST00000357508 SLAIN2Q9P270 581 aa33.09■■■□□ 2.89
C1orf228-201ENST00000357508 LRRC37A3O60309 1634 aa33.07■■■□□ 2.88
C1orf228-201ENST00000357508 KIAA0232Q92628 1395 aa33.07■■■□□ 2.88
C1orf228-201ENST00000357508 BRINP3Q76B58 766 aa33.07■■■□□ 2.88
C1orf228-201ENST00000357508 ZBTB47Q9UFB7 747 aaPredicted RBP33.07■■■□□ 2.88
C1orf228-201ENST00000357508 TRPM3Q9HCF6 1732 aaPredicted RBP33.07■■■□□ 2.88
C1orf228-201ENST00000357508 ABCC4O15439 1325 aa33.06■■■□□ 2.88
C1orf228-201ENST00000357508 PHRF1Q9P1Y6 1649 aaKnown RBP33.06■■■□□ 2.88
C1orf228-201ENST00000357508 GAS2L2Q8NHY3 880 aa33.05■■■□□ 2.88
C1orf228-201ENST00000357508 NPHP3Q7Z494 1330 aa33.03■■■□□ 2.88
C1orf228-201ENST00000357508 LMOD2Q6P5Q4 547 aa33.02■■■□□ 2.88
C1orf228-201ENST00000357508 RTF1Q92541 710 aaKnown RBP33.02■■■□□ 2.88
C1orf228-201ENST00000357508 KRT24Q2M2I5 525 aa33.02■■■□□ 2.88
C1orf228-201ENST00000357508 LTBP4Q8N2S1 1624 aa33.02■■■□□ 2.88
C1orf228-201ENST00000357508 HAP1P54257 671 aaPredicted RBP33.01■■■□□ 2.88
C1orf228-201ENST00000357508 ZBTB7BO15156 539 aaPredicted RBP33■■■□□ 2.87
C1orf228-201ENST00000357508 API5Q9BZZ5 524 aaKnown RBP33■■■□□ 2.87
C1orf228-201ENST00000357508 IP6K1Q92551 441 aa32.99■■■□□ 2.87
C1orf228-201ENST00000357508 LTV1Q96GA3 475 aaPredicted RBP32.99■■■□□ 2.87
C1orf228-201ENST00000357508 SMC5Q8IY18 1101 aa32.98■■■□□ 2.87
C1orf228-201ENST00000357508 CHMP4BQ9H444 224 aaKnown RBP32.98■■■□□ 2.87
C1orf228-201ENST00000357508 HTATSF1O43719 755 aaKnown RBP32.98■■■□□ 2.87
C1orf228-201ENST00000357508 RGPD2P0DJD1 1756 aa32.97■■■□□ 2.87
C1orf228-201ENST00000357508 PXDNQ92626 1479 aa32.97■■■□□ 2.87
C1orf228-201ENST00000357508 KCNH5Q8NCM2 988 aa32.96■■■□□ 2.87
C1orf228-201ENST00000357508 SLIT3O75094 1523 aa32.96■■■□□ 2.87
C1orf228-201ENST00000357508 PLEKHG5O94827 1062 aa32.95■■■□□ 2.87
C1orf228-201ENST00000357508 MYT1Q01538 1121 aa32.95■■■□□ 2.87
C1orf228-201ENST00000357508 ALS2Q96Q42 1657 aa32.94■■■□□ 2.86
C1orf228-201ENST00000357508 MIS18AQ9NYP9 233 aa32.93■■■□□ 2.86
C1orf228-201ENST00000357508 DDRGK1Q96HY6 314 aa32.93■■■□□ 2.86
C1orf228-201ENST00000357508 TSPYL4Q9UJ04 414 aa32.93■■■□□ 2.86
C1orf228-201ENST00000357508 GNAT3A8MTJ3 354 aa32.92■■■□□ 2.86
C1orf228-201ENST00000357508 USP19O94966 1318 aa32.92■■■□□ 2.86
C1orf228-201ENST00000357508 RGS12O14924 1447 aa32.92■■■□□ 2.86
C1orf228-201ENST00000357508 GCP02774 474 aa32.92■■■□□ 2.86
C1orf228-201ENST00000357508 MAP3K5Q99683 1374 aa32.91■■■□□ 2.86
C1orf228-201ENST00000357508 USHBP1Q8N6Y0 703 aa32.89■■■□□ 2.86
C1orf228-201ENST00000357508 TNS3Q68CZ2 1445 aa32.89■■■□□ 2.86
C1orf228-201ENST00000357508 AEBP2Q6ZN18 517 aaPredicted RBP32.89■■■□□ 2.86
C1orf228-201ENST00000357508 SPATA31A3Q5VYP0 1347 aa32.88■■■□□ 2.85
C1orf228-201ENST00000357508 SOS2Q07890 1332 aaPredicted RBP32.86■■■□□ 2.85
C1orf228-201ENST00000357508 INTS3Q68E01 1043 aaKnown RBP32.86■■■□□ 2.85
C1orf228-201ENST00000357508 C1orf115Q9H7X2 142 aa32.86■■■□□ 2.85
C1orf228-201ENST00000357508 PTPRCP08575 1304 aa32.85■■■□□ 2.85
C1orf228-201ENST00000357508 NBPF6Q5VWK0 638 aa32.85■■■□□ 2.85
C1orf228-201ENST00000357508 NBPF4Q96M43 638 aa32.85■■■□□ 2.85
C1orf228-201ENST00000357508 FAM208AQ9UK61 1670 aaKnown RBP32.85■■■□□ 2.85
C1orf228-201ENST00000357508 MED1Q15648 1581 aaPredicted RBP32.84■■■□□ 2.85
C1orf228-201ENST00000357508 IL17REQ8NFR9 667 aa32.84■■■□□ 2.85
C1orf228-201ENST00000357508 ZBTB7CA1YPR0 619 aa32.83■■■□□ 2.85
C1orf228-201ENST00000357508 SEC24BO95487 1268 aa32.83■■■□□ 2.85
C1orf228-201ENST00000357508 NUCB1Q02818 461 aa32.83■■■□□ 2.85
C1orf228-201ENST00000357508 ARHGEF25Q86VW2 580 aa32.82■■■□□ 2.84
C1orf228-201ENST00000357508 CACNA1FO60840 1977 aa32.81■■■□□ 2.84
C1orf228-201ENST00000357508 LMO7Q8WWI1 1683 aa32.8■■■□□ 2.84
C1orf228-201ENST00000357508 SLC4A2P04920 1241 aa32.8■■■□□ 2.84
C1orf228-201ENST00000357508 SIRT2Q8IXJ6 389 aa32.8■■■□□ 2.84
C1orf228-201ENST00000357508 CABLES1Q8TDN4 633 aa32.8■■■□□ 2.84
C1orf228-201ENST00000357508 CAMTA1Q9Y6Y1 1673 aa32.79■■■□□ 2.84
C1orf228-201ENST00000357508 NCAPD2Q15021 1401 aa32.78■■■□□ 2.84
C1orf228-201ENST00000357508 GCC1Q96CN9 775 aa32.78■■■□□ 2.84
C1orf228-201ENST00000357508 BABAM1Q9NWV8 329 aa32.78■■■□□ 2.84
C1orf228-201ENST00000357508 RGPD5Q99666 1765 aa32.78■■■□□ 2.84
C1orf228-201ENST00000357508 TAF7Q15545 349 aaPredicted RBP32.76■■■□□ 2.83
C1orf228-201ENST00000357508 CHD1LQ86WJ1 897 aa32.76■■■□□ 2.83
C1orf228-201ENST00000357508 NHSL1Q5SYE7 1610 aa32.76■■■□□ 2.83
C1orf228-201ENST00000357508 ZC3H6P61129 1189 aaKnown RBP32.75■■■□□ 2.83
C1orf228-201ENST00000357508 LRRC59Q96AG4 307 aaKnown RBP32.75■■■□□ 2.83
C1orf228-201ENST00000357508 CEMIPQ8WUJ3 1361 aa32.75■■■□□ 2.83
C1orf228-201ENST00000357508 LNPKQ9C0E8 428 aa32.74■■■□□ 2.83
C1orf228-201ENST00000357508 KDM3BQ7LBC6 1761 aa32.73■■■□□ 2.83
C1orf228-201ENST00000357508 G2E3Q7L622 706 aa32.72■■■□□ 2.83
C1orf228-201ENST00000357508 SOS1Q07889 1333 aaPredicted RBP32.72■■■□□ 2.83
C1orf228-201ENST00000357508 ROBO1Q9Y6N7 1651 aa32.71■■■□□ 2.83
C1orf228-201ENST00000357508 ATP10DQ9P241 1426 aa32.71■■■□□ 2.83
C1orf228-201ENST00000357508 CRYBG1Q9Y4K1 1723 aa32.69■■■□□ 2.82
C1orf228-201ENST00000357508 ANKRD24Q8TF21 1146 aa32.69■■■□□ 2.82
C1orf228-201ENST00000357508 STK31Q9BXU1 1019 aa32.69■■■□□ 2.82
C1orf228-201ENST00000357508 AXIN2Q9Y2T1 843 aa32.69■■■□□ 2.82
C1orf228-201ENST00000357508 ANKRD45Q5TZF3 282 aa32.68■■■□□ 2.82
C1orf228-201ENST00000357508 N4BP2Q86UW6 1770 aaPredicted RBP32.68■■■□□ 2.82
C1orf228-201ENST00000357508 CCDC30Q5VVM6 783 aa32.68■■■□□ 2.82
C1orf228-201ENST00000357508 PLEKHO1Q53GL0 409 aaPredicted RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms