RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 PLEKHO1Q53GL0 409 aaPredicted RBP23.33■■□□□ 1.33
CDK11A-202ENST00000356937 TOM1L2Q6ZVM7 507 aa23.33■■□□□ 1.33
CDK11A-202ENST00000356937 WDR17Q8IZU2 1322 aa23.33■■□□□ 1.33
CDK11A-202ENST00000356937 RAPGEF4Q8WZA2 1011 aa23.33■■□□□ 1.32
CDK11A-202ENST00000356937 NUTM2BA6NNL0 878 aaPredicted RBP23.32■■□□□ 1.32
CDK11A-202ENST00000356937 NUTM2EB1AL46 878 aaPredicted RBP23.32■■□□□ 1.32
CDK11A-202ENST00000356937 NUTM2AQ8IVF1 878 aaPredicted RBP23.32■■□□□ 1.32
CDK11A-202ENST00000356937 RNF123Q5XPI4 1314 aa23.32■■□□□ 1.32
CDK11A-202ENST00000356937 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
CDK11A-202ENST00000356937 GNAI1P63096 354 aa23.31■■□□□ 1.32
CDK11A-202ENST00000356937 IFT57Q9NWB7 429 aa23.31■■□□□ 1.32
CDK11A-202ENST00000356937 BTG4Q9NY30 223 aa23.31■■□□□ 1.32
CDK11A-202ENST00000356937 MAP3K5Q99683 1374 aa23.31■■□□□ 1.32
CDK11A-202ENST00000356937 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
CDK11A-202ENST00000356937 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
CDK11A-202ENST00000356937 EXOSC9Q06265 439 aaKnown RBP23.3■■□□□ 1.32
CDK11A-202ENST00000356937 CFAP44Q96MT7 982 aa23.3■■□□□ 1.32
CDK11A-202ENST00000356937 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
CDK11A-202ENST00000356937 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
CDK11A-202ENST00000356937 LARP1Q6PKG0 1096 aaKnown RBP23.29■■□□□ 1.32
CDK11A-202ENST00000356937 HTATSF1O43719 755 aaKnown RBP23.29■■□□□ 1.32
CDK11A-202ENST00000356937 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
CDK11A-202ENST00000356937 MBIPQ9NS73 344 aa23.28■■□□□ 1.32
CDK11A-202ENST00000356937 COL14A1Q05707 1796 aaKnown RBP23.28■■□□□ 1.32
CDK11A-202ENST00000356937 MEGF6O75095 1541 aa23.26■■□□□ 1.31
CDK11A-202ENST00000356937 PLIN1O60240 522 aa23.26■■□□□ 1.31
CDK11A-202ENST00000356937 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
CDK11A-202ENST00000356937 IL17REQ8NFR9 667 aa23.26■■□□□ 1.31
CDK11A-202ENST00000356937 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
CDK11A-202ENST00000356937 CRB1P82279 1406 aa23.25■■□□□ 1.31
CDK11A-202ENST00000356937 BCAR3O75815 825 aa23.25■■□□□ 1.31
CDK11A-202ENST00000356937 CARD10Q9BWT7 1032 aa23.25■■□□□ 1.31
CDK11A-202ENST00000356937 USP35Q9P2H5 1018 aa23.24■■□□□ 1.31
CDK11A-202ENST00000356937 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
CDK11A-202ENST00000356937 JCADQ9P266 1359 aa23.23■■□□□ 1.31
CDK11A-202ENST00000356937 CHL1O00533 1208 aa23.22■■□□□ 1.31
CDK11A-202ENST00000356937 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
CDK11A-202ENST00000356937 SPG7Q9UQ90 795 aa23.22■■□□□ 1.31
CDK11A-202ENST00000356937 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
CDK11A-202ENST00000356937 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
CDK11A-202ENST00000356937 CT47B1P0C2W7 299 aaPredicted RBP23.2■■□□□ 1.3
CDK11A-202ENST00000356937 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
CDK11A-202ENST00000356937 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
CDK11A-202ENST00000356937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.2■■□□□ 1.3
CDK11A-202ENST00000356937 TSPYL4Q9UJ04 414 aa23.2■■□□□ 1.3
CDK11A-202ENST00000356937 HSPA1LP34931 641 aa23.19■■□□□ 1.3
CDK11A-202ENST00000356937 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
CDK11A-202ENST00000356937 PLCH1Q4KWH8 1693 aa23.19■■□□□ 1.3
CDK11A-202ENST00000356937 TSPYL6Q8N831 410 aa23.19■■□□□ 1.3
CDK11A-202ENST00000356937 IL2RBP14784 551 aa23.18■■□□□ 1.3
CDK11A-202ENST00000356937 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
CDK11A-202ENST00000356937 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.17■■□□□ 1.3
CDK11A-202ENST00000356937 RNMTO43148 476 aaKnown RBP23.17■■□□□ 1.3
CDK11A-202ENST00000356937 TAF7Q15545 349 aaPredicted RBP23.17■■□□□ 1.3
CDK11A-202ENST00000356937 C8orf58Q8NAV2 365 aa23.17■■□□□ 1.3
CDK11A-202ENST00000356937 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
CDK11A-202ENST00000356937 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
CDK11A-202ENST00000356937 PARP4Q9UKK3 1724 aaKnown RBP23.16■■□□□ 1.3
CDK11A-202ENST00000356937 PHKG2P15735 406 aa23.16■■□□□ 1.3
CDK11A-202ENST00000356937 TEFQ10587 303 aa23.15■■□□□ 1.3
CDK11A-202ENST00000356937 TWISTNBQ3B726 338 aaPredicted RBP23.15■■□□□ 1.3
CDK11A-202ENST00000356937 IFNL2Q8IZJ0 200 aa23.15■■□□□ 1.3
CDK11A-202ENST00000356937 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
CDK11A-202ENST00000356937 VAMP4O75379 141 aa23.15■■□□□ 1.3
CDK11A-202ENST00000356937 KRT24Q2M2I5 525 aa23.15■■□□□ 1.3
CDK11A-202ENST00000356937 ZCRB1Q8TBF4 217 aaKnown RBP23.15■■□□□ 1.3
CDK11A-202ENST00000356937 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
CDK11A-202ENST00000356937 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.3
CDK11A-202ENST00000356937 CYP27B1O15528 508 aa23.14■■□□□ 1.29
CDK11A-202ENST00000356937 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
CDK11A-202ENST00000356937 SSH1Q8WYL5 1049 aa23.13■■□□□ 1.29
CDK11A-202ENST00000356937 SMC4Q9NTJ3 1288 aa23.13■■□□□ 1.29
CDK11A-202ENST00000356937 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
CDK11A-202ENST00000356937 C8orf37Q96NL8 207 aa23.13■■□□□ 1.29
CDK11A-202ENST00000356937 SPATA31A6Q5VVP1 1343 aa23.11■■□□□ 1.29
CDK11A-202ENST00000356937 ERICH6BQ5W0A0 696 aa23.11■■□□□ 1.29
CDK11A-202ENST00000356937 NGLY1Q96IV0 654 aa23.11■■□□□ 1.29
CDK11A-202ENST00000356937 NRAPQ86VF7 1730 aa23.1■■□□□ 1.29
CDK11A-202ENST00000356937 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
CDK11A-202ENST00000356937 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
CDK11A-202ENST00000356937 BABAM1Q9NWV8 329 aa23.1■■□□□ 1.29
CDK11A-202ENST00000356937 SLIT2O94813 1529 aa23.09■■□□□ 1.29
CDK11A-202ENST00000356937 TCERG1O14776 1098 aaKnown RBP23.09■■□□□ 1.29
CDK11A-202ENST00000356937 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
CDK11A-202ENST00000356937 ZNF428Q96B54 188 aa23.09■■□□□ 1.29
CDK11A-202ENST00000356937 KDM6AO15550 1401 aaPredicted RBP23.09■■□□□ 1.29
CDK11A-202ENST00000356937 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
CDK11A-202ENST00000356937 EXOC6Q8TAG9 804 aa23.08■■□□□ 1.29
CDK11A-202ENST00000356937 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
CDK11A-202ENST00000356937 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.29
CDK11A-202ENST00000356937 ALDH1L2Q3SY69 923 aa23.08■■□□□ 1.29
CDK11A-202ENST00000356937 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
CDK11A-202ENST00000356937 SCN11AQ9UI33 1791 aa23.08■■□□□ 1.28
CDK11A-202ENST00000356937 HSP90AB1P08238 724 aaKnown RBP23.07■■□□□ 1.28
CDK11A-202ENST00000356937 LRP6O75581 1613 aa23.07■■□□□ 1.28
CDK11A-202ENST00000356937 CRBNQ96SW2 442 aa23.07■■□□□ 1.28
CDK11A-202ENST00000356937 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
CDK11A-202ENST00000356937 SPATA31A1Q5TZJ5 1347 aa23.06■■□□□ 1.28
CDK11A-202ENST00000356937 UNC5CLQ8IV45 518 aa23.05■■□□□ 1.28
CDK11A-202ENST00000356937 KCNQ3O43525 872 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms