RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 ROBO2Q9HCK4 1378 aa10.38□□□□□ -0.75
COMMD9-202ENST00000355500 IL16Q14005 1332 aa10.38□□□□□ -0.75
COMMD9-202ENST00000355500 SOX12O15370 315 aa10.38□□□□□ -0.75
COMMD9-202ENST00000355500 RBM6P78332 1123 aaKnown RBP10.38□□□□□ -0.75
COMMD9-202ENST00000355500 LAS1LQ9Y4W2 734 aaKnown RBP10.38□□□□□ -0.75
COMMD9-202ENST00000355500 NRAPQ86VF7 1730 aa10.38□□□□□ -0.75
COMMD9-202ENST00000355500 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
COMMD9-202ENST00000355500 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
COMMD9-202ENST00000355500 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
COMMD9-202ENST00000355500 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
COMMD9-202ENST00000355500 SLIT2O94813 1529 aa10.37□□□□□ -0.75
COMMD9-202ENST00000355500 MS4A1P11836 297 aa10.37□□□□□ -0.75
COMMD9-202ENST00000355500 PLCH1Q4KWH8 1693 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 RXRBP28702 533 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 RGS12O14924 1447 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 CDCA7LQ96GN5 454 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 COL14A1Q05707 1796 aaKnown RBP10.36□□□□□ -0.75
COMMD9-202ENST00000355500 PPIP5K1Q6PFW1 1433 aa10.36□□□□□ -0.75
COMMD9-202ENST00000355500 LOC102724159A0A0B4J2E5 919 aa10.35□□□□□ -0.75
COMMD9-202ENST00000355500 SRPK2P78362 688 aaKnown RBP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 PWP2Q15269 919 aaKnown RBP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 FOXD4L6Q3SYB3 417 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 FOXD4L3Q6VB84 417 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
COMMD9-202ENST00000355500 WASLO00401 505 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.75
COMMD9-202ENST00000355500 SLC4A2P04920 1241 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-202ENST00000355500 PDE3AQ14432 1141 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 RGPD3A6NKT7 1758 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-202ENST00000355500 RGPD4Q7Z3J3 1758 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 RGPD1P0DJD0 1748 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 MAP2P11137 1827 aaKnown RBP10.34□□□□□ -0.75
COMMD9-202ENST00000355500 APAF1O14727 1248 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 FYB1O15117 783 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 MTHFSP49914 203 aa10.34□□□□□ -0.75
COMMD9-202ENST00000355500 VIRMAQ69YN4 1812 aaKnown RBP10.33□□□□□ -0.76
COMMD9-202ENST00000355500 EXOC8Q8IYI6 725 aa10.33□□□□□ -0.76
COMMD9-202ENST00000355500 CLGNO14967 610 aa10.33□□□□□ -0.76
COMMD9-202ENST00000355500 BRD1O95696 1058 aa10.33□□□□□ -0.76
COMMD9-202ENST00000355500 HSP90AB4PQ58FF6 505 aa10.33□□□□□ -0.76
COMMD9-202ENST00000355500 TMCO4Q5TGY1 634 aa10.33□□□□□ -0.76
COMMD9-202ENST00000355500 ARHGEF10O15013 1369 aa10.33□□□□□ -0.76
COMMD9-202ENST00000355500 MSH5O43196 834 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 TRPC5Q9UL62 973 aaPredicted RBP10.32□□□□□ -0.76
COMMD9-202ENST00000355500 AFF2P51816 1311 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
COMMD9-202ENST00000355500 KDM2BQ8NHM5 1336 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 PHF14O94880 888 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 MEX3CQ5U5Q3 659 aaKnown RBP10.32□□□□□ -0.76
COMMD9-202ENST00000355500 SSH2Q76I76 1423 aa10.32□□□□□ -0.76
COMMD9-202ENST00000355500 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 MYH16Q9H6N6 1097 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 OVOS2A0A0J9YW53 1432 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 TNS3Q68CZ2 1445 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 OVOS2Q6IE36 1432 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-202ENST00000355500 ZNF830Q96NB3 372 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-202ENST00000355500 STK26Q9P289 416 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 THSD7AQ9UPZ6 1657 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 GLI3P10071 1580 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
COMMD9-202ENST00000355500 ABCC6O95255 1503 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 USP31Q70CQ4 1352 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 DISP2A7MBM2 1401 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 TCP11L2Q8N4U5 519 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 CCDC61Q9Y6R9 512 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
COMMD9-202ENST00000355500 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
COMMD9-202ENST00000355500 FCHSD2O94868 740 aa10.29□□□□□ -0.76
COMMD9-202ENST00000355500 ZNF622Q969S3 477 aaKnown RBP eCLIP10.29□□□□□ -0.76
COMMD9-202ENST00000355500 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
COMMD9-202ENST00000355500 PRDM4Q9UKN5 801 aa10.29□□□□□ -0.76
COMMD9-202ENST00000355500 RGPD8O14715 1765 aaPredicted RBP10.28□□□□□ -0.76
COMMD9-202ENST00000355500 CABP1Q9NZU7 370 aa10.28□□□□□ -0.76
COMMD9-202ENST00000355500 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
COMMD9-202ENST00000355500 USP6P35125 1406 aa10.28□□□□□ -0.76
COMMD9-202ENST00000355500 DIAPH1O60610 1272 aaKnown RBP10.28□□□□□ -0.76
COMMD9-202ENST00000355500 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
COMMD9-202ENST00000355500 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
COMMD9-202ENST00000355500 SAFB2Q14151 953 aaKnown RBP eCLIP10.27□□□□□ -0.76
COMMD9-202ENST00000355500 CRBNQ96SW2 442 aa10.27□□□□□ -0.76
COMMD9-202ENST00000355500 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.76
COMMD9-202ENST00000355500 RIPOR2Q9Y4F9 1068 aa10.27□□□□□ -0.76
COMMD9-202ENST00000355500 CALD1Q05682 793 aaKnown RBP10.27□□□□□ -0.77
COMMD9-202ENST00000355500 PSME1Q06323 249 aa10.27□□□□□ -0.77
COMMD9-202ENST00000355500 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.77
COMMD9-202ENST00000355500 NUDT16Q96DE0 195 aaKnown RBP10.27□□□□□ -0.77
COMMD9-202ENST00000355500 HDAC5Q9UQL6 1122 aa10.26□□□□□ -0.77
COMMD9-202ENST00000355500 MAPK8IP3Q9UPT6 1336 aa10.25□□□□□ -0.77
COMMD9-202ENST00000355500 QTRT2Q9H974 415 aaKnown RBP10.25□□□□□ -0.77
COMMD9-202ENST00000355500 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
COMMD9-202ENST00000355500 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms