RNA–Protein interactions for RNA: ENST00000355216.5

FOXN4-202, Transcript of forkhead box N4, humanhuman

TSL 2 BASIC

Gene FOXN4, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-202ENST00000355216 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
FOXN4-202ENST00000355216 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
FOXN4-202ENST00000355216 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
FOXN4-202ENST00000355216 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
FOXN4-202ENST00000355216 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
FOXN4-202ENST00000355216 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.33
FOXN4-202ENST00000355216 GCC1Q96CN9 775 aa17.13■□□□□ 0.33
FOXN4-202ENST00000355216 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
FOXN4-202ENST00000355216 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
FOXN4-202ENST00000355216 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
FOXN4-202ENST00000355216 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
FOXN4-202ENST00000355216 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
FOXN4-202ENST00000355216 TSPYL4Q9UJ04 414 aa17.12■□□□□ 0.33
FOXN4-202ENST00000355216 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
FOXN4-202ENST00000355216 RGS12O14924 1447 aa17.12■□□□□ 0.33
FOXN4-202ENST00000355216 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
FOXN4-202ENST00000355216 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
FOXN4-202ENST00000355216 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
FOXN4-202ENST00000355216 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
FOXN4-202ENST00000355216 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
FOXN4-202ENST00000355216 ESCO1Q5FWF5 840 aa17.09■□□□□ 0.33
FOXN4-202ENST00000355216 PTPRCP08575 1304 aa17.09■□□□□ 0.33
FOXN4-202ENST00000355216 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
FOXN4-202ENST00000355216 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
FOXN4-202ENST00000355216 BECN1Q14457 450 aa17.08■□□□□ 0.33
FOXN4-202ENST00000355216 NFKBIBQ15653 356 aa17.08■□□□□ 0.33
FOXN4-202ENST00000355216 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
FOXN4-202ENST00000355216 PSME1Q06323 249 aa17.08■□□□□ 0.32
FOXN4-202ENST00000355216 ADAMTSL3P82987 1691 aa17.08■□□□□ 0.32
FOXN4-202ENST00000355216 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
FOXN4-202ENST00000355216 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
FOXN4-202ENST00000355216 G2E3Q7L622 706 aa17.06■□□□□ 0.32
FOXN4-202ENST00000355216 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
FOXN4-202ENST00000355216 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
FOXN4-202ENST00000355216 IP6K1Q92551 441 aa17.05■□□□□ 0.32
FOXN4-202ENST00000355216 BMP2KLQ5H9B9 411 aa17.05■□□□□ 0.32
FOXN4-202ENST00000355216 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
FOXN4-202ENST00000355216 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
FOXN4-202ENST00000355216 MSH6P52701 1360 aa17.04■□□□□ 0.32
FOXN4-202ENST00000355216 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
FOXN4-202ENST00000355216 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
FOXN4-202ENST00000355216 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
FOXN4-202ENST00000355216 MAP3K5Q99683 1374 aa17.03■□□□□ 0.32
FOXN4-202ENST00000355216 MEIS3Q99687 375 aa17.03■□□□□ 0.32
FOXN4-202ENST00000355216 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
FOXN4-202ENST00000355216 F6X3S4 739 aa17.02■□□□□ 0.32
FOXN4-202ENST00000355216 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
FOXN4-202ENST00000355216 ATP10DQ9P241 1426 aa17.02■□□□□ 0.32
FOXN4-202ENST00000355216 NFAT5O94916 1531 aa17.02■□□□□ 0.32
FOXN4-202ENST00000355216 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.31
FOXN4-202ENST00000355216 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.31
FOXN4-202ENST00000355216 NBPF4Q96M43 638 aa17.02■□□□□ 0.31
FOXN4-202ENST00000355216 LRRC37A3O60309 1634 aa17.02■□□□□ 0.31
FOXN4-202ENST00000355216 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.31
FOXN4-202ENST00000355216 LTN1O94822 1766 aa17.01■□□□□ 0.31
FOXN4-202ENST00000355216 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
FOXN4-202ENST00000355216 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
FOXN4-202ENST00000355216 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
FOXN4-202ENST00000355216 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
FOXN4-202ENST00000355216 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
FOXN4-202ENST00000355216 NECTIN2Q92692 538 aa17■□□□□ 0.31
FOXN4-202ENST00000355216 STK31Q9BXU1 1019 aa17■□□□□ 0.31
FOXN4-202ENST00000355216 FRAT2O75474 233 aaPredicted RBP16.99■□□□□ 0.31
FOXN4-202ENST00000355216 SLKQ9H2G2 1235 aaPredicted RBP16.99■□□□□ 0.31
FOXN4-202ENST00000355216 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
FOXN4-202ENST00000355216 PLEKHM2Q8IWE5 1019 aa16.99■□□□□ 0.31
FOXN4-202ENST00000355216 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
FOXN4-202ENST00000355216 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
FOXN4-202ENST00000355216 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
FOXN4-202ENST00000355216 BCL11AQ9H165 835 aa16.98■□□□□ 0.31
FOXN4-202ENST00000355216 ANTXR1Q9H6X2 564 aa16.98■□□□□ 0.31
FOXN4-202ENST00000355216 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
FOXN4-202ENST00000355216 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
FOXN4-202ENST00000355216 FLIIQ13045 1269 aa16.97■□□□□ 0.31
FOXN4-202ENST00000355216 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
FOXN4-202ENST00000355216 LRRC59Q96AG4 307 aaKnown RBP16.97■□□□□ 0.31
FOXN4-202ENST00000355216 GCP02774 474 aa16.96■□□□□ 0.31
FOXN4-202ENST00000355216 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
FOXN4-202ENST00000355216 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
FOXN4-202ENST00000355216 FKBP5Q13451 457 aaPredicted RBP16.95■□□□□ 0.3
FOXN4-202ENST00000355216 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
FOXN4-202ENST00000355216 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
FOXN4-202ENST00000355216 APBB1O00213 710 aa16.94■□□□□ 0.3
FOXN4-202ENST00000355216 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
FOXN4-202ENST00000355216 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
FOXN4-202ENST00000355216 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
FOXN4-202ENST00000355216 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
FOXN4-202ENST00000355216 SOS1Q07889 1333 aaPredicted RBP16.94■□□□□ 0.3
FOXN4-202ENST00000355216 CEMIPQ8WUJ3 1361 aa16.94■□□□□ 0.3
FOXN4-202ENST00000355216 TTC22Q5TAA0 569 aa16.93■□□□□ 0.3
FOXN4-202ENST00000355216 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
FOXN4-202ENST00000355216 CDC45O75419 566 aa16.92■□□□□ 0.3
FOXN4-202ENST00000355216 GNAI2P04899 355 aa16.92■□□□□ 0.3
FOXN4-202ENST00000355216 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
FOXN4-202ENST00000355216 RGPD2P0DJD1 1756 aa16.92■□□□□ 0.3
FOXN4-202ENST00000355216 HMMRO75330 724 aa16.91■□□□□ 0.3
FOXN4-202ENST00000355216 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
FOXN4-202ENST00000355216 PHRF1Q9P1Y6 1649 aaKnown RBP16.91■□□□□ 0.3
FOXN4-202ENST00000355216 KIF2CQ99661 725 aa16.91■□□□□ 0.3
FOXN4-202ENST00000355216 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms