RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 BMP2KLQ5H9B9 411 aa27.31■■□□□ 1.96
LIMS2-202ENST00000355119 SIRT2Q8IXJ6 389 aa27.31■■□□□ 1.96
LIMS2-202ENST00000355119 PTPRCP08575 1304 aa27.31■■□□□ 1.96
LIMS2-202ENST00000355119 KCNA6P17658 529 aa27.3■■□□□ 1.96
LIMS2-202ENST00000355119 RTF1Q92541 710 aaKnown RBP27.3■■□□□ 1.96
LIMS2-202ENST00000355119 GAS2L2Q8NHY3 880 aa27.29■■□□□ 1.96
LIMS2-202ENST00000355119 TBC1D2Q9BYX2 928 aa27.29■■□□□ 1.96
LIMS2-202ENST00000355119 MTHFSDQ2M296 383 aaKnown RBP27.29■■□□□ 1.96
LIMS2-202ENST00000355119 RGS12O14924 1447 aa27.28■■□□□ 1.96
LIMS2-202ENST00000355119 NLRP6P59044 892 aa27.28■■□□□ 1.96
LIMS2-202ENST00000355119 KRT24Q2M2I5 525 aa27.28■■□□□ 1.96
LIMS2-202ENST00000355119 EYA1Q99502 592 aa27.28■■□□□ 1.96
LIMS2-202ENST00000355119 HTATSF1O43719 755 aaKnown RBP27.26■■□□□ 1.95
LIMS2-202ENST00000355119 MARF1Q9Y4F3 1742 aaKnown RBP27.25■■□□□ 1.95
LIMS2-202ENST00000355119 FRAT2O75474 233 aaPredicted RBP27.25■■□□□ 1.95
LIMS2-202ENST00000355119 FOXO3O43524 673 aa27.23■■□□□ 1.95
LIMS2-202ENST00000355119 ANTXR1Q9H6X2 564 aa27.23■■□□□ 1.95
LIMS2-202ENST00000355119 TSPYL4Q9UJ04 414 aa27.23■■□□□ 1.95
LIMS2-202ENST00000355119 HOXC9P31274 260 aa27.22■■□□□ 1.95
LIMS2-202ENST00000355119 GSE1Q14687 1217 aa27.22■■□□□ 1.95
LIMS2-202ENST00000355119 DCTPP1Q9H773 170 aa27.22■■□□□ 1.95
LIMS2-202ENST00000355119 RBM25P49756 843 aaKnown RBP27.21■■□□□ 1.95
LIMS2-202ENST00000355119 RPAP2Q8IXW5 612 aaPredicted RBP27.21■■□□□ 1.95
LIMS2-202ENST00000355119 ANKRD44Q8N8A2 993 aa27.21■■□□□ 1.95
LIMS2-202ENST00000355119 SLKQ9H2G2 1235 aaPredicted RBP27.21■■□□□ 1.95
LIMS2-202ENST00000355119 LRRC37A3O60309 1634 aa27.21■■□□□ 1.95
LIMS2-202ENST00000355119 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
LIMS2-202ENST00000355119 ATP10DQ9P241 1426 aa27.19■■□□□ 1.94
LIMS2-202ENST00000355119 ANKLE2Q86XL3 938 aa27.18■■□□□ 1.94
LIMS2-202ENST00000355119 ABTB2Q8N961 1025 aa27.18■■□□□ 1.94
LIMS2-202ENST00000355119 RTL1A6NKG5 1358 aa27.18■■□□□ 1.94
LIMS2-202ENST00000355119 NWD1Q149M9 1564 aa27.18■■□□□ 1.94
LIMS2-202ENST00000355119 SLC4A2P04920 1241 aa27.17■■□□□ 1.94
LIMS2-202ENST00000355119 MIS18AQ9NYP9 233 aa27.17■■□□□ 1.94
LIMS2-202ENST00000355119 MSH6P52701 1360 aa27.17■■□□□ 1.94
LIMS2-202ENST00000355119 ZNF142P52746 1687 aaPredicted RBP27.17■■□□□ 1.94
LIMS2-202ENST00000355119 PHF8Q9UPP1 1060 aa27.16■■□□□ 1.94
LIMS2-202ENST00000355119 EIF5BO60841 1220 aaKnown RBP27.16■■□□□ 1.94
LIMS2-202ENST00000355119 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
LIMS2-202ENST00000355119 GNAT3A8MTJ3 354 aa27.15■■□□□ 1.94
LIMS2-202ENST00000355119 NUTM2GQ5VZR2 741 aa27.15■■□□□ 1.94
LIMS2-202ENST00000355119 CEP85Q6P2H3 762 aa27.15■■□□□ 1.94
LIMS2-202ENST00000355119 HSCBQ8IWL3 235 aa27.14■■□□□ 1.94
LIMS2-202ENST00000355119 SOS1Q07889 1333 aaPredicted RBP27.14■■□□□ 1.93
LIMS2-202ENST00000355119 CCT4P50991 539 aaKnown RBP27.13■■□□□ 1.93
LIMS2-202ENST00000355119 BABAM1Q9NWV8 329 aa27.13■■□□□ 1.93
LIMS2-202ENST00000355119 MAP3K5Q99683 1374 aa27.12■■□□□ 1.93
LIMS2-202ENST00000355119 TBC1D9Q6ZT07 1266 aa27.12■■□□□ 1.93
LIMS2-202ENST00000355119 CDC45O75419 566 aa27.11■■□□□ 1.93
LIMS2-202ENST00000355119 PLEKHM2Q8IWE5 1019 aa27.11■■□□□ 1.93
LIMS2-202ENST00000355119 SNX21Q969T3 373 aa27.11■■□□□ 1.93
LIMS2-202ENST00000355119 MEIS3Q99687 375 aa27.11■■□□□ 1.93
LIMS2-202ENST00000355119 STK31Q9BXU1 1019 aa27.11■■□□□ 1.93
LIMS2-202ENST00000355119 CCDC30Q5VVM6 783 aa27.08■■□□□ 1.93
LIMS2-202ENST00000355119 G2E3Q7L622 706 aa27.08■■□□□ 1.93
LIMS2-202ENST00000355119 C14orf37Q86TY3 774 aa27.08■■□□□ 1.93
LIMS2-202ENST00000355119 ADGRL3Q9HAR2 1447 aa27.07■■□□□ 1.92
LIMS2-202ENST00000355119 HMMRO75330 724 aa27.07■■□□□ 1.92
LIMS2-202ENST00000355119 CHMP5Q9NZZ3 219 aa27.07■■□□□ 1.92
LIMS2-202ENST00000355119 FAM208AQ9UK61 1670 aaKnown RBP27.07■■□□□ 1.92
LIMS2-202ENST00000355119 LTN1O94822 1766 aa27.07■■□□□ 1.92
LIMS2-202ENST00000355119 TTC22Q5TAA0 569 aa27.07■■□□□ 1.92
LIMS2-202ENST00000355119 LTV1Q96GA3 475 aaPredicted RBP27.07■■□□□ 1.92
LIMS2-202ENST00000355119 IP6K1Q92551 441 aa27.06■■□□□ 1.92
LIMS2-202ENST00000355119 NFAT5O94916 1531 aa27.05■■□□□ 1.92
LIMS2-202ENST00000355119 GSPT1P15170 499 aaKnown RBP27.05■■□□□ 1.92
LIMS2-202ENST00000355119 TAF7Q15545 349 aaPredicted RBP27.05■■□□□ 1.92
LIMS2-202ENST00000355119 IL17REQ8NFR9 667 aa27.04■■□□□ 1.92
LIMS2-202ENST00000355119 SLC4A10Q6U841 1118 aa27.04■■□□□ 1.92
LIMS2-202ENST00000355119 SPRYD3Q8NCJ5 442 aa27.03■■□□□ 1.92
LIMS2-202ENST00000355119 NCOA3Q9Y6Q9 1424 aa27.03■■□□□ 1.92
LIMS2-202ENST00000355119 F6X3S4 739 aa27.02■■□□□ 1.92
LIMS2-202ENST00000355119 FLIIQ13045 1269 aa27.01■■□□□ 1.91
LIMS2-202ENST00000355119 KCNH5Q8NCM2 988 aa27.01■■□□□ 1.91
LIMS2-202ENST00000355119 PSME1Q06323 249 aa27■■□□□ 1.91
LIMS2-202ENST00000355119 ADAMTSL3P82987 1691 aa27■■□□□ 1.91
LIMS2-202ENST00000355119 GNAI2P04899 355 aa27■■□□□ 1.91
LIMS2-202ENST00000355119 C16orf71Q8IYS4 520 aaPredicted RBP27■■□□□ 1.91
LIMS2-202ENST00000355119 KIF2CQ99661 725 aa27■■□□□ 1.91
LIMS2-202ENST00000355119 CACNA1FO60840 1977 aa27■■□□□ 1.91
LIMS2-202ENST00000355119 PHRF1Q9P1Y6 1649 aaKnown RBP26.99■■□□□ 1.91
LIMS2-202ENST00000355119 ESCO1Q5FWF5 840 aa26.99■■□□□ 1.91
LIMS2-202ENST00000355119 GNAI3P08754 354 aa26.98■■□□□ 1.91
LIMS2-202ENST00000355119 PXDNLA1KZ92 1463 aa26.97■■□□□ 1.91
LIMS2-202ENST00000355119 FKBP5Q13451 457 aaPredicted RBP26.97■■□□□ 1.91
LIMS2-202ENST00000355119 N4BP2Q86UW6 1770 aaPredicted RBP26.97■■□□□ 1.91
LIMS2-202ENST00000355119 USHBP1Q8N6Y0 703 aa26.97■■□□□ 1.91
LIMS2-202ENST00000355119 NPHP4O75161 1426 aaPredicted RBP26.97■■□□□ 1.91
LIMS2-202ENST00000355119 HSP90AB1P08238 724 aaKnown RBP26.95■■□□□ 1.91
LIMS2-202ENST00000355119 CEMIPQ8WUJ3 1361 aa26.95■■□□□ 1.9
LIMS2-202ENST00000355119 SMARCA5O60264 1052 aaPredicted RBP26.95■■□□□ 1.9
LIMS2-202ENST00000355119 CASC1Q6TDU7 716 aa26.95■■□□□ 1.9
LIMS2-202ENST00000355119 OTUD7AQ8TE49 926 aaPredicted RBP26.95■■□□□ 1.9
LIMS2-202ENST00000355119 RBM33Q96EV2 1170 aaKnown RBP26.94■■□□□ 1.9
LIMS2-202ENST00000355119 MED1Q15648 1581 aaPredicted RBP26.94■■□□□ 1.9
LIMS2-202ENST00000355119 MCM4P33991 863 aa26.94■■□□□ 1.9
LIMS2-202ENST00000355119 DDIT3P35638 169 aa26.94■■□□□ 1.9
LIMS2-202ENST00000355119 CIZ1Q9ULV3 898 aaPredicted RBP26.94■■□□□ 1.9
LIMS2-202ENST00000355119 SETD1BQ9UPS6 1966 aaKnown RBP26.93■■□□□ 1.9
LIMS2-202ENST00000355119 NBPF6Q5VWK0 638 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms