RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 AMPHP49418 695 aa27.9■■■□□ 2.06
NKX2-1-201ENST00000354822 SOX12O15370 315 aa27.9■■■□□ 2.06
NKX2-1-201ENST00000354822 MFAP1P55081 439 aaKnown RBP27.9■■■□□ 2.06
NKX2-1-201ENST00000354822 PTPRCP08575 1304 aa27.89■■■□□ 2.06
NKX2-1-201ENST00000354822 CRB1P82279 1406 aa27.89■■■□□ 2.06
NKX2-1-201ENST00000354822 RTF1Q92541 710 aaKnown RBP27.89■■■□□ 2.06
NKX2-1-201ENST00000354822 C1orf115Q9H7X2 142 aa27.89■■■□□ 2.06
NKX2-1-201ENST00000354822 SIRT2Q8IXJ6 389 aa27.89■■■□□ 2.05
NKX2-1-201ENST00000354822 TBC1D2Q9BYX2 928 aa27.88■■■□□ 2.05
NKX2-1-201ENST00000354822 GAS2L2Q8NHY3 880 aa27.87■■■□□ 2.05
NKX2-1-201ENST00000354822 IGSF1Q8N6C5 1336 aa27.87■■■□□ 2.05
NKX2-1-201ENST00000354822 HTATSF1O43719 755 aaKnown RBP27.86■■■□□ 2.05
NKX2-1-201ENST00000354822 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
NKX2-1-201ENST00000354822 USP54Q70EL1 1684 aa27.85■■■□□ 2.05
NKX2-1-201ENST00000354822 NPHP4O75161 1426 aaPredicted RBP27.85■■■□□ 2.05
NKX2-1-201ENST00000354822 NLRP6P59044 892 aa27.85■■■□□ 2.05
NKX2-1-201ENST00000354822 GSE1Q14687 1217 aa27.85■■■□□ 2.05
NKX2-1-201ENST00000354822 MTHFSDQ2M296 383 aaKnown RBP27.85■■■□□ 2.05
NKX2-1-201ENST00000354822 FRAT2O75474 233 aaPredicted RBP27.84■■■□□ 2.05
NKX2-1-201ENST00000354822 EYA1Q99502 592 aa27.84■■■□□ 2.05
NKX2-1-201ENST00000354822 ANTXR1Q9H6X2 564 aa27.83■■■□□ 2.05
NKX2-1-201ENST00000354822 RPAP2Q8IXW5 612 aaPredicted RBP27.82■■■□□ 2.04
NKX2-1-201ENST00000354822 RBM25P49756 843 aaKnown RBP27.82■■■□□ 2.04
NKX2-1-201ENST00000354822 DCTPP1Q9H773 170 aa27.82■■■□□ 2.04
NKX2-1-201ENST00000354822 EIF5BO60841 1220 aaKnown RBP27.81■■■□□ 2.04
NKX2-1-201ENST00000354822 KRT24Q2M2I5 525 aa27.81■■■□□ 2.04
NKX2-1-201ENST00000354822 MARF1Q9Y4F3 1742 aaKnown RBP27.81■■■□□ 2.04
NKX2-1-201ENST00000354822 ADGRL3Q9HAR2 1447 aa27.8■■■□□ 2.04
NKX2-1-201ENST00000354822 RGS12O14924 1447 aa27.8■■■□□ 2.04
NKX2-1-201ENST00000354822 TSPYL4Q9UJ04 414 aa27.8■■■□□ 2.04
NKX2-1-201ENST00000354822 ANKRD44Q8N8A2 993 aa27.79■■■□□ 2.04
NKX2-1-201ENST00000354822 PHF8Q9UPP1 1060 aa27.79■■■□□ 2.04
NKX2-1-201ENST00000354822 SLKQ9H2G2 1235 aaPredicted RBP27.79■■■□□ 2.04
NKX2-1-201ENST00000354822 FOXO3O43524 673 aa27.77■■■□□ 2.04
NKX2-1-201ENST00000354822 SLC4A2P04920 1241 aa27.77■■■□□ 2.04
NKX2-1-201ENST00000354822 HOXC9P31274 260 aa27.77■■■□□ 2.04
NKX2-1-201ENST00000354822 ABTB2Q8N961 1025 aa27.76■■■□□ 2.03
NKX2-1-201ENST00000354822 GNAT3A8MTJ3 354 aa27.73■■■□□ 2.03
NKX2-1-201ENST00000354822 BABAM1Q9NWV8 329 aa27.73■■■□□ 2.03
NKX2-1-201ENST00000354822 SOS1Q07889 1333 aaPredicted RBP27.73■■■□□ 2.03
NKX2-1-201ENST00000354822 NWD1Q149M9 1564 aa27.73■■■□□ 2.03
NKX2-1-201ENST00000354822 HSCBQ8IWL3 235 aa27.73■■■□□ 2.03
NKX2-1-201ENST00000354822 MIS18AQ9NYP9 233 aa27.73■■■□□ 2.03
NKX2-1-201ENST00000354822 RBM33Q96EV2 1170 aaKnown RBP27.72■■■□□ 2.03
NKX2-1-201ENST00000354822 CCT4P50991 539 aaKnown RBP27.72■■■□□ 2.03
NKX2-1-201ENST00000354822 CEP85Q6P2H3 762 aa27.72■■■□□ 2.03
NKX2-1-201ENST00000354822 SNX21Q969T3 373 aa27.72■■■□□ 2.03
NKX2-1-201ENST00000354822 ATP10DQ9P241 1426 aa27.71■■■□□ 2.03
NKX2-1-201ENST00000354822 RTL1A6NKG5 1358 aa27.71■■■□□ 2.03
NKX2-1-201ENST00000354822 NUTM2GQ5VZR2 741 aa27.7■■■□□ 2.02
NKX2-1-201ENST00000354822 PLEKHM2Q8IWE5 1019 aa27.69■■■□□ 2.02
NKX2-1-201ENST00000354822 STK31Q9BXU1 1019 aa27.69■■■□□ 2.02
NKX2-1-201ENST00000354822 MSH6P52701 1360 aa27.69■■■□□ 2.02
NKX2-1-201ENST00000354822 CDC45O75419 566 aa27.69■■■□□ 2.02
NKX2-1-201ENST00000354822 TBC1D9Q6ZT07 1266 aa27.69■■■□□ 2.02
NKX2-1-201ENST00000354822 HMMRO75330 724 aa27.67■■■□□ 2.02
NKX2-1-201ENST00000354822 CHMP5Q9NZZ3 219 aa27.67■■■□□ 2.02
NKX2-1-201ENST00000354822 ESCO1Q5FWF5 840 aa27.66■■■□□ 2.02
NKX2-1-201ENST00000354822 CCDC30Q5VVM6 783 aa27.66■■■□□ 2.02
NKX2-1-201ENST00000354822 MEIS3Q99687 375 aa27.66■■■□□ 2.02
NKX2-1-201ENST00000354822 C14orf37Q86TY3 774 aa27.66■■■□□ 2.02
NKX2-1-201ENST00000354822 LRRC37A3O60309 1634 aa27.65■■■□□ 2.02
NKX2-1-201ENST00000354822 MAP3K5Q99683 1374 aa27.65■■■□□ 2.02
NKX2-1-201ENST00000354822 PSME1Q06323 249 aa27.63■■■□□ 2.01
NKX2-1-201ENST00000354822 TAF7Q15545 349 aaPredicted RBP27.63■■■□□ 2.01
NKX2-1-201ENST00000354822 TTC22Q5TAA0 569 aa27.63■■■□□ 2.01
NKX2-1-201ENST00000354822 G2E3Q7L622 706 aa27.62■■■□□ 2.01
NKX2-1-201ENST00000354822 IP6K1Q92551 441 aa27.62■■■□□ 2.01
NKX2-1-201ENST00000354822 LTN1O94822 1766 aa27.61■■■□□ 2.01
NKX2-1-201ENST00000354822 GSPT1P15170 499 aaKnown RBP27.61■■■□□ 2.01
NKX2-1-201ENST00000354822 SLC4A10Q6U841 1118 aa27.6■■■□□ 2.01
NKX2-1-201ENST00000354822 IL17REQ8NFR9 667 aa27.6■■■□□ 2.01
NKX2-1-201ENST00000354822 KCNH5Q8NCM2 988 aa27.6■■■□□ 2.01
NKX2-1-201ENST00000354822 SPRYD3Q8NCJ5 442 aa27.59■■■□□ 2.01
NKX2-1-201ENST00000354822 LTV1Q96GA3 475 aaPredicted RBP27.59■■■□□ 2.01
NKX2-1-201ENST00000354822 NFAT5O94916 1531 aa27.59■■■□□ 2.01
NKX2-1-201ENST00000354822 GNAI2P04899 355 aa27.58■■■□□ 2.01
NKX2-1-201ENST00000354822 FLIIQ13045 1269 aa27.58■■■□□ 2.01
NKX2-1-201ENST00000354822 PROSER2Q86WR7 435 aaPredicted RBP27.58■■■□□ 2.01
NKX2-1-201ENST00000354822 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2.01
NKX2-1-201ENST00000354822 CACNA1FO60840 1977 aa27.58■■■□□ 2.01
NKX2-1-201ENST00000354822 KIF2CQ99661 725 aa27.58■■■□□ 2
NKX2-1-201ENST00000354822 F6X3S4 739 aa27.57■■■□□ 2
NKX2-1-201ENST00000354822 GNAI3P08754 354 aa27.57■■■□□ 2
NKX2-1-201ENST00000354822 C16orf71Q8IYS4 520 aaPredicted RBP27.56■■■□□ 2
NKX2-1-201ENST00000354822 CHMP4AQ9BY43 222 aa27.56■■■□□ 2
NKX2-1-201ENST00000354822 CASC1Q6TDU7 716 aa27.55■■■□□ 2
NKX2-1-201ENST00000354822 FKBP5Q13451 457 aaPredicted RBP27.55■■■□□ 2
NKX2-1-201ENST00000354822 ORAI2Q96SN7 254 aa27.54■■■□□ 2
NKX2-1-201ENST00000354822 CIZ1Q9ULV3 898 aaPredicted RBP27.54■■■□□ 2
NKX2-1-201ENST00000354822 HSP90AB1P08238 724 aaKnown RBP27.53■■■□□ 2
NKX2-1-201ENST00000354822 MCM4P33991 863 aa27.53■■■□□ 2
NKX2-1-201ENST00000354822 PHRF1Q9P1Y6 1649 aaKnown RBP27.53■■■□□ 2
NKX2-1-201ENST00000354822 KIF1AQ12756 1690 aa27.52■■■□□ 2
NKX2-1-201ENST00000354822 DDIT3P35638 169 aa27.52■■■□□ 2
NKX2-1-201ENST00000354822 OSBPL3Q9H4L5 887 aa27.52■■■□□ 2
NKX2-1-201ENST00000354822 CEMIPQ8WUJ3 1361 aa27.51■■□□□ 1.99
NKX2-1-201ENST00000354822 FAM208AQ9UK61 1670 aaKnown RBP27.5■■□□□ 1.99
NKX2-1-201ENST00000354822 C19orf44Q9H6X5 657 aa27.49■■□□□ 1.99
NKX2-1-201ENST00000354822 PXDNLA1KZ92 1463 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms