RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 CEP126Q9P2H0 1117 aa21.08■□□□□ 0.97
CRKL-201ENST00000354336 ABCC11Q96J66 1382 aa21.08■□□□□ 0.97
CRKL-201ENST00000354336 RDXP35241 583 aaKnown RBP21.08■□□□□ 0.97
CRKL-201ENST00000354336 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.96
CRKL-201ENST00000354336 NOL7Q9UMY1 257 aaKnown RBP21.08■□□□□ 0.96
CRKL-201ENST00000354336 NKTRP30414 1462 aaKnown RBP21.08■□□□□ 0.96
CRKL-201ENST00000354336 GNAT3A8MTJ3 354 aa21.07■□□□□ 0.96
CRKL-201ENST00000354336 EXOC6BQ9Y2D4 811 aa21.07■□□□□ 0.96
CRKL-201ENST00000354336 H0YHG0 523 aa21.07■□□□□ 0.96
CRKL-201ENST00000354336 NUP133Q8WUM0 1156 aa21.07■□□□□ 0.96
CRKL-201ENST00000354336 MPHOSPH8Q99549 860 aa21.07■□□□□ 0.96
CRKL-201ENST00000354336 CCDC61Q9Y6R9 512 aa21.06■□□□□ 0.96
CRKL-201ENST00000354336 DDX54Q8TDD1 881 aaKnown RBP21.06■□□□□ 0.96
CRKL-201ENST00000354336 SSH1Q8WYL5 1049 aa21.06■□□□□ 0.96
CRKL-201ENST00000354336 NUDT16Q96DE0 195 aaKnown RBP21.06■□□□□ 0.96
CRKL-201ENST00000354336 MX1P20591 662 aa21.06■□□□□ 0.96
CRKL-201ENST00000354336 NUTM1Q86Y26 1132 aa21.06■□□□□ 0.96
CRKL-201ENST00000354336 LUC7LQ9NQ29 371 aaKnown RBP21.06■□□□□ 0.96
CRKL-201ENST00000354336 CASTP20810 708 aaKnown RBP21.05■□□□□ 0.96
CRKL-201ENST00000354336 KIF1BPQ96EK5 621 aa21.05■□□□□ 0.96
CRKL-201ENST00000354336 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
CRKL-201ENST00000354336 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
CRKL-201ENST00000354336 C11orf95C9JLR9 678 aaPredicted RBP21.04■□□□□ 0.96
CRKL-201ENST00000354336 RAB11FIP3O75154 756 aa21.04■□□□□ 0.96
CRKL-201ENST00000354336 C20orf194Q5TEA3 1177 aa21.04■□□□□ 0.96
CRKL-201ENST00000354336 LEKR1Q6ZMV7 388 aa21.04■□□□□ 0.96
CRKL-201ENST00000354336 AXDND1Q5T1B0 1012 aaPredicted RBP21.04■□□□□ 0.96
CRKL-201ENST00000354336 SLC26A8Q96RN1 970 aa21.04■□□□□ 0.96
CRKL-201ENST00000354336 SYCP1Q15431 976 aa21.04■□□□□ 0.96
CRKL-201ENST00000354336 STK11IPQ8N1F8 1099 aa21.04■□□□□ 0.96
CRKL-201ENST00000354336 UPF3BQ9BZI7 483 aaKnown RBP21.04■□□□□ 0.96
CRKL-201ENST00000354336 UQCRHLA0A096LP55 91 aa21.03■□□□□ 0.96
CRKL-201ENST00000354336 UQCRHP07919 91 aa21.03■□□□□ 0.96
CRKL-201ENST00000354336 THUMPD2Q9BTF0 503 aaKnown RBP21.03■□□□□ 0.96
CRKL-201ENST00000354336 GLRX3O76003 335 aaKnown RBP21.03■□□□□ 0.96
CRKL-201ENST00000354336 RAPGEF3O95398 923 aa21.03■□□□□ 0.96
CRKL-201ENST00000354336 TXLNBQ8N3L3 684 aa21.03■□□□□ 0.96
CRKL-201ENST00000354336 MAP3K11Q16584 847 aa21.03■□□□□ 0.96
CRKL-201ENST00000354336 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
CRKL-201ENST00000354336 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
CRKL-201ENST00000354336 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
CRKL-201ENST00000354336 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
CRKL-201ENST00000354336 DEF6Q9H4E7 631 aa21.02■□□□□ 0.96
CRKL-201ENST00000354336 SYCE3A1L190 88 aa21.02■□□□□ 0.96
CRKL-201ENST00000354336 UBAC1Q9BSL1 405 aa21.02■□□□□ 0.96
CRKL-201ENST00000354336 SMTNL1A8MU46 457 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 WASF1Q92558 559 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 TDO2P48775 406 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 MCM10Q7L590 875 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 ERLIN1O75477 346 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 ZSCAN30Q86W11 494 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.01■□□□□ 0.953e-7■■■□□ 16.4
CRKL-201ENST00000354336 CAMSAP2Q08AD1 1489 aa21.01■□□□□ 0.95
CRKL-201ENST00000354336 IMMTQ16891 758 aaKnown RBP21■□□□□ 0.95
CRKL-201ENST00000354336 MIS18AQ9NYP9 233 aa21■□□□□ 0.95
CRKL-201ENST00000354336 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
CRKL-201ENST00000354336 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
CRKL-201ENST00000354336 FILIP1Q7Z7B0 1213 aa20.99■□□□□ 0.95
CRKL-201ENST00000354336 ATP2B2Q01814 1243 aa20.99■□□□□ 0.95
CRKL-201ENST00000354336 CCDC191Q8NCU4 936 aa20.99■□□□□ 0.95
CRKL-201ENST00000354336 SMARCA5O60264 1052 aaPredicted RBP20.99■□□□□ 0.95
CRKL-201ENST00000354336 ERLIN2O94905 339 aa20.99■□□□□ 0.95
CRKL-201ENST00000354336 CCDC181Q5TID7 509 aa20.99■□□□□ 0.95
CRKL-201ENST00000354336 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
CRKL-201ENST00000354336 SKIDA1Q1XH10 827 aa20.98■□□□□ 0.95
CRKL-201ENST00000354336 ANKLE2Q86XL3 938 aa20.98■□□□□ 0.95
CRKL-201ENST00000354336 ABCC5O15440 1437 aa20.98■□□□□ 0.95
CRKL-201ENST00000354336 TANGO6Q9C0B7 1094 aa20.98■□□□□ 0.95
CRKL-201ENST00000354336 CCDC83Q8IWF9 413 aa20.98■□□□□ 0.95
CRKL-201ENST00000354336 FAM177A1Q8N128 213 aaPredicted RBP20.98■□□□□ 0.95
CRKL-201ENST00000354336 DDX11Q96FC9 970 aa20.98■□□□□ 0.95
CRKL-201ENST00000354336 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
CRKL-201ENST00000354336 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
CRKL-201ENST00000354336 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
CRKL-201ENST00000354336 PRPF40BQ6NWY9 871 aaKnown RBP20.97■□□□□ 0.95
CRKL-201ENST00000354336 PRDM11Q9NQV5 511 aa20.97■□□□□ 0.95
CRKL-201ENST00000354336 NCOA1Q15788 1441 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 PLEKHH1Q9ULM0 1364 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 EIF3JO75822 258 aaKnown RBP20.96■□□□□ 0.95
CRKL-201ENST00000354336 KLHL34Q8N239 644 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 ZHX3Q9H4I2 956 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 GOLGA6L10A6NI86 522 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 TSPYL1Q9H0U9 437 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 U3KPZ7 1027 aaPredicted RBP20.96■□□□□ 0.95
CRKL-201ENST00000354336 SH2B1Q9NRF2 756 aaPredicted RBP20.96■□□□□ 0.95
CRKL-201ENST00000354336 RAI14Q9P0K7 980 aa20.96■□□□□ 0.95
CRKL-201ENST00000354336 FERMT3Q86UX7 667 aa20.95■□□□□ 0.94
CRKL-201ENST00000354336 IQGAP2Q13576 1575 aa20.95■□□□□ 0.94
CRKL-201ENST00000354336 IDH1O75874 414 aaKnown RBP20.95■□□□□ 0.94
CRKL-201ENST00000354336 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
CRKL-201ENST00000354336 TMEM132AQ24JP5 1023 aa20.95■□□□□ 0.94
CRKL-201ENST00000354336 AIDAQ96BJ3 306 aa20.95■□□□□ 0.94
CRKL-201ENST00000354336 LARP1Q6PKG0 1096 aaKnown RBP20.95■□□□□ 0.94
CRKL-201ENST00000354336 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.94
CRKL-201ENST00000354336 CCDC183Q5T5S1 534 aa20.94■□□□□ 0.94
CRKL-201ENST00000354336 SKAP1Q86WV1 359 aa20.94■□□□□ 0.94
CRKL-201ENST00000354336 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
CRKL-201ENST00000354336 BMP2KQ9NSY1 1161 aaPredicted RBP20.94■□□□□ 0.94
CRKL-201ENST00000354336 LRP2BPQ9P2M1 347 aa20.94■□□□□ 0.94
CRKL-201ENST00000354336 CEP131Q9UPN4 1083 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms