RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FOXD4L1Q9NU39 408 aa30.41■■■□□ 2.46
CPNE1-202ENST00000352393 CLEC17AQ6ZS10 378 aa30.4■■■□□ 2.46
CPNE1-202ENST00000352393 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
CPNE1-202ENST00000352393 OVOS2A0A0J9YW53 1432 aa30.4■■■□□ 2.46
CPNE1-202ENST00000352393 OVOS2Q6IE36 1432 aa30.4■■■□□ 2.46
CPNE1-202ENST00000352393 CHL1O00533 1208 aa30.4■■■□□ 2.46
CPNE1-202ENST00000352393 RABEP1Q15276 862 aa30.39■■■□□ 2.46
CPNE1-202ENST00000352393 MSH6P52701 1360 aa30.39■■■□□ 2.46
CPNE1-202ENST00000352393 RPAP2Q8IXW5 612 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-202ENST00000352393 CEP85Q6P2H3 762 aa30.38■■■□□ 2.45
CPNE1-202ENST00000352393 RTL1A6NKG5 1358 aa30.38■■■□□ 2.45
CPNE1-202ENST00000352393 SSFA2P28290 1259 aa30.37■■■□□ 2.45
CPNE1-202ENST00000352393 KRT24Q2M2I5 525 aa30.37■■■□□ 2.45
CPNE1-202ENST00000352393 SULT6B1Q6IMI4 303 aa30.37■■■□□ 2.45
CPNE1-202ENST00000352393 CLCN1P35523 988 aa30.36■■■□□ 2.45
CPNE1-202ENST00000352393 PTPRCP08575 1304 aa30.36■■■□□ 2.45
CPNE1-202ENST00000352393 GAS2L3Q86XJ1 694 aa30.35■■■□□ 2.45
CPNE1-202ENST00000352393 C16orf71Q8IYS4 520 aaPredicted RBP30.35■■■□□ 2.45
CPNE1-202ENST00000352393 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.34■■■□□ 2.45
CPNE1-202ENST00000352393 USP26Q9BXU7 913 aa30.34■■■□□ 2.45
CPNE1-202ENST00000352393 TTC21BQ7Z4L5 1316 aa30.33■■■□□ 2.45
CPNE1-202ENST00000352393 CRB1P82279 1406 aa30.33■■■□□ 2.45
CPNE1-202ENST00000352393 OTUD7AQ8TE49 926 aaPredicted RBP30.32■■■□□ 2.44
CPNE1-202ENST00000352393 ROBO2Q9HCK4 1378 aa30.32■■■□□ 2.44
CPNE1-202ENST00000352393 FMN2Q9NZ56 1722 aa30.32■■■□□ 2.44
CPNE1-202ENST00000352393 MLECQ14165 292 aa30.32■■■□□ 2.44
CPNE1-202ENST00000352393 AK9Q5TCS8 1911 aa30.32■■■□□ 2.44
CPNE1-202ENST00000352393 MCM10Q7L590 875 aa30.31■■■□□ 2.44
CPNE1-202ENST00000352393 UBR1Q8IWV7 1749 aa30.31■■■□□ 2.44
CPNE1-202ENST00000352393 KIF13AQ9H1H9 1805 aa30.29■■■□□ 2.44
CPNE1-202ENST00000352393 USP6P35125 1406 aa30.28■■■□□ 2.44
CPNE1-202ENST00000352393 IBTKQ9P2D0 1353 aaPredicted RBP30.28■■■□□ 2.44
CPNE1-202ENST00000352393 GOLGA6L22H0YM25 854 aa30.28■■■□□ 2.44
CPNE1-202ENST00000352393 SDSP20132 328 aa30.28■■■□□ 2.44
CPNE1-202ENST00000352393 MEIS3Q99687 375 aa30.28■■■□□ 2.44
CPNE1-202ENST00000352393 USP31Q70CQ4 1352 aa30.28■■■□□ 2.44
CPNE1-202ENST00000352393 BAG4O95429 457 aaKnown RBP30.28■■■□□ 2.44
CPNE1-202ENST00000352393 ADAMTS13Q76LX8 1427 aa30.26■■■□□ 2.43
CPNE1-202ENST00000352393 HDGFP51858 240 aaKnown RBP30.26■■■□□ 2.43
CPNE1-202ENST00000352393 KLHL40Q2TBA0 621 aa30.25■■■□□ 2.43
CPNE1-202ENST00000352393 ARHGEF10O15013 1369 aa30.25■■■□□ 2.43
CPNE1-202ENST00000352393 ACEP12821 1306 aa30.25■■■□□ 2.43
CPNE1-202ENST00000352393 SMARCA5O60264 1052 aaPredicted RBP30.25■■■□□ 2.43
CPNE1-202ENST00000352393 CYP2E1P05181 493 aaPredicted RBP30.25■■■□□ 2.43
CPNE1-202ENST00000352393 RIMS1Q86UR5 1692 aaKnown RBP30.24■■■□□ 2.43
CPNE1-202ENST00000352393 TUBGCP6Q96RT7 1819 aa30.24■■■□□ 2.43
CPNE1-202ENST00000352393 TMEM2Q9UHN6 1383 aa30.24■■■□□ 2.43
CPNE1-202ENST00000352393 PLEKHG3A1L390 1219 aa30.23■■■□□ 2.43
CPNE1-202ENST00000352393 CASC1Q6TDU7 716 aa30.23■■■□□ 2.43
CPNE1-202ENST00000352393 HSP90AB2PQ58FF8 381 aa30.23■■■□□ 2.43
CPNE1-202ENST00000352393 NUCB2P80303 420 aa30.22■■■□□ 2.43
CPNE1-202ENST00000352393 TNRQ92752 1358 aa30.22■■■□□ 2.43
CPNE1-202ENST00000352393 SSH2Q76I76 1423 aa30.21■■■□□ 2.43
CPNE1-202ENST00000352393 ERBB4Q15303 1308 aa30.21■■■□□ 2.43
CPNE1-202ENST00000352393 ESPNB1AK53 854 aa30.2■■■□□ 2.43
CPNE1-202ENST00000352393 PRKCSHP14314 528 aaPredicted RBP30.2■■■□□ 2.43
CPNE1-202ENST00000352393 SLC4A2P04920 1241 aa30.19■■■□□ 2.42
CPNE1-202ENST00000352393 LRRC37A3O60309 1634 aa30.19■■■□□ 2.42
CPNE1-202ENST00000352393 APBB1O00213 710 aa30.18■■■□□ 2.42
CPNE1-202ENST00000352393 HMMRO75330 724 aa30.18■■■□□ 2.42
CPNE1-202ENST00000352393 REC8O95072 547 aa30.18■■■□□ 2.42
CPNE1-202ENST00000352393 OSBPL3Q9H4L5 887 aa30.18■■■□□ 2.42
CPNE1-202ENST00000352393 DDX49Q9Y6V7 483 aaKnown RBP30.18■■■□□ 2.42
CPNE1-202ENST00000352393 FAM208AQ9UK61 1670 aaKnown RBP30.18■■■□□ 2.42
CPNE1-202ENST00000352393 MAP3K19Q56UN5 1328 aa30.17■■■□□ 2.42
CPNE1-202ENST00000352393 CWC22Q9HCG8 908 aaKnown RBP30.17■■■□□ 2.42
CPNE1-202ENST00000352393 ST18O60284 1047 aa30.16■■■□□ 2.42
CPNE1-202ENST00000352393 KDRP35968 1356 aa30.15■■■□□ 2.42
CPNE1-202ENST00000352393 CCT4P50991 539 aaKnown RBP30.15■■■□□ 2.42
CPNE1-202ENST00000352393 N4BP2Q86UW6 1770 aaPredicted RBP30.15■■■□□ 2.42
CPNE1-202ENST00000352393 ERC2O15083 957 aa30.14■■■□□ 2.42
CPNE1-202ENST00000352393 G2E3Q7L622 706 aa30.14■■■□□ 2.42
CPNE1-202ENST00000352393 XRN1Q8IZH2 1706 aaKnown RBP30.14■■■□□ 2.42
CPNE1-202ENST00000352393 TRIM44Q96DX7 344 aaPredicted RBP30.14■■■□□ 2.42
CPNE1-202ENST00000352393 ESF1Q9H501 851 aaKnown RBP30.14■■■□□ 2.42
CPNE1-202ENST00000352393 MCTP1Q6DN14 999 aa30.13■■■□□ 2.41
CPNE1-202ENST00000352393 PLEKHG1Q9ULL1 1385 aa30.12■■■□□ 2.41
CPNE1-202ENST00000352393 PDE1AP54750 535 aa30.12■■■□□ 2.41
CPNE1-202ENST00000352393 PKP1Q13835 747 aa30.12■■■□□ 2.41
CPNE1-202ENST00000352393 MTHFSDQ2M296 383 aaKnown RBP30.12■■■□□ 2.41
CPNE1-202ENST00000352393 PPP1R9BQ96SB3 815 aa30.12■■■□□ 2.41
CPNE1-202ENST00000352393 MIS18AQ9NYP9 233 aa30.12■■■□□ 2.41
CPNE1-202ENST00000352393 TSPYL4Q9UJ04 414 aa30.12■■■□□ 2.41
CPNE1-202ENST00000352393 FOXO3O43524 673 aa30.11■■■□□ 2.41
CPNE1-202ENST00000352393 ZNF445P59923 1031 aa30.11■■■□□ 2.41
CPNE1-202ENST00000352393 CCDC173Q0VFZ6 552 aa30.11■■■□□ 2.41
CPNE1-202ENST00000352393 LMBRD1Q9NUN5 540 aa30.11■■■□□ 2.41
CPNE1-202ENST00000352393 SBNO1A3KN83 1393 aa30.11■■■□□ 2.41
CPNE1-202ENST00000352393 FLT4P35916 1363 aa30.11■■■□□ 2.41
CPNE1-202ENST00000352393 CEP170BQ9Y4F5 1589 aaPredicted RBP30.11■■■□□ 2.41
CPNE1-202ENST00000352393 SALL3Q9BXA9 1300 aa30.1■■■□□ 2.41
CPNE1-202ENST00000352393 F6X3S4 739 aa30.1■■■□□ 2.41
CPNE1-202ENST00000352393 NASPP49321 788 aaPredicted RBP30.1■■■□□ 2.41
CPNE1-202ENST00000352393 NAP1L5Q96NT1 182 aaPredicted RBP30.1■■■□□ 2.41
CPNE1-202ENST00000352393 TTC21AQ8NDW8 1320 aa30.09■■■□□ 2.41
CPNE1-202ENST00000352393 ZGPATQ8N5A5 531 aaKnown RBP30.09■■■□□ 2.41
CPNE1-202ENST00000352393 SLC4A10Q6U841 1118 aa30.08■■■□□ 2.41
CPNE1-202ENST00000352393 RTF1Q92541 710 aaKnown RBP30.08■■■□□ 2.41
CPNE1-202ENST00000352393 NUTM2FA1L443 756 aa30.08■■■□□ 2.41
CPNE1-202ENST00000352393 PTPRUQ92729 1446 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms