RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 ERICH2A1L162 156 aa16.58■□□□□ 0.25
SMC6-201ENST00000351948 YTHDC2Q9H6S0 1430 aaKnown RBP16.58■□□□□ 0.25
SMC6-201ENST00000351948 NEK4P51957 841 aa16.58■□□□□ 0.24
SMC6-201ENST00000351948 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.24
SMC6-201ENST00000351948 TRIM27P14373 513 aa16.58■□□□□ 0.24
SMC6-201ENST00000351948 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
SMC6-201ENST00000351948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.58■□□□□ 0.249e-7■■■□□ 17.5
SMC6-201ENST00000351948 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 MSNP26038 577 aaKnown RBP16.57■□□□□ 0.24
SMC6-201ENST00000351948 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 TRIM29Q14134 588 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 UHRF1BP1Q6BDS2 1440 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 GOLGA6L3A6NEY3 463 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 TOM1O60784 492 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
SMC6-201ENST00000351948 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
SMC6-201ENST00000351948 LTKP29376 864 aa16.56■□□□□ 0.24
SMC6-201ENST00000351948 FLIIQ13045 1269 aa16.56■□□□□ 0.24
SMC6-201ENST00000351948 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
SMC6-201ENST00000351948 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
SMC6-201ENST00000351948 PTMSP20962 102 aa16.56■□□□□ 0.24
SMC6-201ENST00000351948 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
SMC6-201ENST00000351948 GCP02774 474 aa16.55■□□□□ 0.24
SMC6-201ENST00000351948 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
SMC6-201ENST00000351948 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
SMC6-201ENST00000351948 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
SMC6-201ENST00000351948 NKTRP30414 1462 aaKnown RBP16.55■□□□□ 0.24
SMC6-201ENST00000351948 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
SMC6-201ENST00000351948 CCDC34Q96HJ3 373 aa16.54■□□□□ 0.24
SMC6-201ENST00000351948 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
SMC6-201ENST00000351948 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
SMC6-201ENST00000351948 KRT24Q2M2I5 525 aa16.54■□□□□ 0.24
SMC6-201ENST00000351948 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
SMC6-201ENST00000351948 CTDP1Q9Y5B0 961 aaPredicted RBP16.54■□□□□ 0.24
SMC6-201ENST00000351948 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 ZPR1O75312 459 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
SMC6-201ENST00000351948 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 PHF14O94880 888 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 ASXL1Q8IXJ9 1541 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 A0A087WZG4 1122 aa16.53■□□□□ 0.24
SMC6-201ENST00000351948 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
SMC6-201ENST00000351948 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
SMC6-201ENST00000351948 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.24
SMC6-201ENST00000351948 ABCC1P33527 1531 aa16.52■□□□□ 0.24
SMC6-201ENST00000351948 ADGRL2O95490 1459 aa16.52■□□□□ 0.24
SMC6-201ENST00000351948 PES1O00541 588 aaKnown RBP16.52■□□□□ 0.24
SMC6-201ENST00000351948 ALDH1L2Q3SY69 923 aa16.52■□□□□ 0.24
SMC6-201ENST00000351948 NPATQ14207 1427 aa16.52■□□□□ 0.23
SMC6-201ENST00000351948 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.23
SMC6-201ENST00000351948 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
SMC6-201ENST00000351948 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
SMC6-201ENST00000351948 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
SMC6-201ENST00000351948 EYA1Q99502 592 aa16.51■□□□□ 0.23
SMC6-201ENST00000351948 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
SMC6-201ENST00000351948 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
SMC6-201ENST00000351948 IDH1O75874 414 aaKnown RBP16.51■□□□□ 0.23
SMC6-201ENST00000351948 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
SMC6-201ENST00000351948 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
SMC6-201ENST00000351948 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
SMC6-201ENST00000351948 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
SMC6-201ENST00000351948 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
SMC6-201ENST00000351948 STK3Q13188 491 aa16.5■□□□□ 0.23
SMC6-201ENST00000351948 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
SMC6-201ENST00000351948 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
SMC6-201ENST00000351948 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
SMC6-201ENST00000351948 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
SMC6-201ENST00000351948 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
SMC6-201ENST00000351948 CHD1O14646 1710 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 PER1O15534 1290 aaPredicted RBP16.49■□□□□ 0.23
SMC6-201ENST00000351948 RBM5P52756 815 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMC6-201ENST00000351948 ABCA8O94911 1581 aa16.49■□□□□ 0.23
SMC6-201ENST00000351948 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
SMC6-201ENST00000351948 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
SMC6-201ENST00000351948 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
SMC6-201ENST00000351948 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
SMC6-201ENST00000351948 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
SMC6-201ENST00000351948 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
SMC6-201ENST00000351948 NEO1Q92859 1461 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 PSMA5P28066 241 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 TPM4P67936 248 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.236e-6■■■□□ 19.2
SMC6-201ENST00000351948 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
SMC6-201ENST00000351948 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
SMC6-201ENST00000351948 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
SMC6-201ENST00000351948 PLEKHH1Q9ULM0 1364 aa16.46■□□□□ 0.23
SMC6-201ENST00000351948 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
SMC6-201ENST00000351948 FLT4P35916 1363 aa16.46■□□□□ 0.23
SMC6-201ENST00000351948 HOXC9P31274 260 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms