RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TSPOAP1O95153 1857 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 SLC4A10Q6U841 1118 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 GBP4Q96PP9 640 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 USP26Q9BXU7 913 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 DLG5Q8TDM6 1919 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 KNDC1Q76NI1 1749 aa22.41■■□□□ 1.18
PTP4A3-202ENST00000349124 MSH6P52701 1360 aa22.41■■□□□ 1.18
PTP4A3-202ENST00000349124 SPATA31D1Q6ZQQ2 1576 aa22.4■■□□□ 1.18
PTP4A3-202ENST00000349124 ATP10DQ9P241 1426 aa22.4■■□□□ 1.18
PTP4A3-202ENST00000349124 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
PTP4A3-202ENST00000349124 PKP1Q13835 747 aa22.39■■□□□ 1.17
PTP4A3-202ENST00000349124 SLC26A8Q96RN1 970 aa22.39■■□□□ 1.17
PTP4A3-202ENST00000349124 RTL1A6NKG5 1358 aa22.39■■□□□ 1.17
PTP4A3-202ENST00000349124 RPAP2Q8IXW5 612 aaPredicted RBP22.38■■□□□ 1.17
PTP4A3-202ENST00000349124 TSHZ3Q63HK5 1081 aa22.38■■□□□ 1.17
PTP4A3-202ENST00000349124 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
PTP4A3-202ENST00000349124 LTKP29376 864 aa22.37■■□□□ 1.17
PTP4A3-202ENST00000349124 MAP3K19Q56UN5 1328 aa22.36■■□□□ 1.17
PTP4A3-202ENST00000349124 NECTIN2Q92692 538 aa22.36■■□□□ 1.17
PTP4A3-202ENST00000349124 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
PTP4A3-202ENST00000349124 KIF24Q5T7B8 1368 aa22.35■■□□□ 1.17
PTP4A3-202ENST00000349124 PLPPR3Q6T4P5 718 aa22.35■■□□□ 1.17
PTP4A3-202ENST00000349124 BAG4O95429 457 aaKnown RBP22.34■■□□□ 1.17
PTP4A3-202ENST00000349124 TSPYL4Q9UJ04 414 aa22.34■■□□□ 1.17
PTP4A3-202ENST00000349124 AGLP35573 1532 aa22.34■■□□□ 1.17
PTP4A3-202ENST00000349124 RABEP1Q15276 862 aa22.34■■□□□ 1.17
PTP4A3-202ENST00000349124 CHAMP1Q96JM3 812 aa22.34■■□□□ 1.17
PTP4A3-202ENST00000349124 ZGPATQ8N5A5 531 aaKnown RBP22.33■■□□□ 1.17
PTP4A3-202ENST00000349124 HDGFP51858 240 aaKnown RBP22.33■■□□□ 1.16
PTP4A3-202ENST00000349124 EXOC6BQ9Y2D4 811 aa22.32■■□□□ 1.16
PTP4A3-202ENST00000349124 CRB1P82279 1406 aa22.32■■□□□ 1.16
PTP4A3-202ENST00000349124 PLEKHG3A1L390 1219 aa22.31■■□□□ 1.16
PTP4A3-202ENST00000349124 ERBB4Q15303 1308 aa22.31■■□□□ 1.16
PTP4A3-202ENST00000349124 PTPRCP08575 1304 aa22.31■■□□□ 1.16
PTP4A3-202ENST00000349124 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
PTP4A3-202ENST00000349124 KIAA0232Q92628 1395 aa22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 DDX49Q9Y6V7 483 aaKnown RBP22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 TECPR2O15040 1411 aa22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 TMEM2Q9UHN6 1383 aa22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 SKOR2Q2VWA4 1001 aaPredicted RBP22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 RTF1Q92541 710 aaKnown RBP22.3■■□□□ 1.16
PTP4A3-202ENST00000349124 NUTM2GQ5VZR2 741 aa22.29■■□□□ 1.16
PTP4A3-202ENST00000349124 EYA1Q99502 592 aa22.29■■□□□ 1.16
PTP4A3-202ENST00000349124 OVOS2A0A0J9YW53 1432 aa22.29■■□□□ 1.16
PTP4A3-202ENST00000349124 OVOS2Q6IE36 1432 aa22.29■■□□□ 1.16
PTP4A3-202ENST00000349124 C3P01024 1663 aa22.29■■□□□ 1.16
PTP4A3-202ENST00000349124 DIP2BQ9P265 1576 aa22.28■■□□□ 1.16
PTP4A3-202ENST00000349124 TNRQ92752 1358 aa22.28■■□□□ 1.16
PTP4A3-202ENST00000349124 MON2Q7Z3U7 1717 aa22.28■■□□□ 1.16
PTP4A3-202ENST00000349124 HAP1P54257 671 aaPredicted RBP22.28■■□□□ 1.16
PTP4A3-202ENST00000349124 NCLP19338 710 aaKnown RBP22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 USP6P35125 1406 aa22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 PDE1AP54750 535 aa22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 FOXD4L5Q5VV16 416 aaPredicted RBP22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 FOXD4L4Q8WXT5 416 aaPredicted RBP22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 AK9Q5TCS8 1911 aa22.27■■□□□ 1.16
PTP4A3-202ENST00000349124 PNMA6EA0A0J9YXQ4 647 aa22.25■■□□□ 1.15
PTP4A3-202ENST00000349124 CLCN1P35523 988 aa22.25■■□□□ 1.15
PTP4A3-202ENST00000349124 AMPHP49418 695 aa22.25■■□□□ 1.15
PTP4A3-202ENST00000349124 GOLGA6L22H0YM25 854 aa22.24■■□□□ 1.15
PTP4A3-202ENST00000349124 CASC1Q6TDU7 716 aa22.24■■□□□ 1.15
PTP4A3-202ENST00000349124 CLEC17AQ6ZS10 378 aa22.24■■□□□ 1.15
PTP4A3-202ENST00000349124 ZDHHC9Q9Y397 364 aa22.24■■□□□ 1.15
PTP4A3-202ENST00000349124 PEAK1Q9H792 1746 aa22.24■■□□□ 1.15
PTP4A3-202ENST00000349124 NGDNQ8NEJ9 315 aaKnown RBP22.24■■□□□ 1.15
PTP4A3-202ENST00000349124 ESPNB1AK53 854 aa22.23■■□□□ 1.15
PTP4A3-202ENST00000349124 CYP2E1P05181 493 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-202ENST00000349124 REREQ9P2R6 1566 aa22.23■■□□□ 1.15
PTP4A3-202ENST00000349124 ERC2O15083 957 aa22.23■■□□□ 1.15
PTP4A3-202ENST00000349124 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
PTP4A3-202ENST00000349124 HMMRO75330 724 aa22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 FKBP5Q13451 457 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 KLHL40Q2TBA0 621 aa22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 CAVIN1Q6NZI2 390 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 LTV1Q96GA3 475 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 USP31Q70CQ4 1352 aa22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 NAP1L5Q96NT1 182 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 LMBRD1Q9NUN5 540 aa22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 ISY1Q9ULR0 285 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 PTPRUQ92729 1446 aa22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 GNAI2P04899 355 aa22.22■■□□□ 1.15
PTP4A3-202ENST00000349124 REC8O95072 547 aa22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 CCT4P50991 539 aaKnown RBP22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 AKAP12Q02952 1782 aa22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 ST18O60284 1047 aa22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 PRPF40AO75400 957 aaKnown RBP22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 FLIIQ13045 1269 aa22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 NOL8Q76FK4 1167 aaKnown RBP22.21■■□□□ 1.15
PTP4A3-202ENST00000349124 NEK4P51957 841 aa22.2■■□□□ 1.14
PTP4A3-202ENST00000349124 NUCB2P80303 420 aa22.2■■□□□ 1.14
PTP4A3-202ENST00000349124 STK31Q9BXU1 1019 aa22.2■■□□□ 1.14
PTP4A3-202ENST00000349124 PALD1Q9ULE6 856 aa22.2■■□□□ 1.14
PTP4A3-202ENST00000349124 RILPL2Q969X0 211 aa22.19■■□□□ 1.14
PTP4A3-202ENST00000349124 TRIM44Q96DX7 344 aaPredicted RBP22.19■■□□□ 1.14
PTP4A3-202ENST00000349124 RBM27Q9P2N5 1060 aaKnown RBP22.19■■□□□ 1.14
PTP4A3-202ENST00000349124 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms