RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RPGRIP1LQ68CZ1 1315 aa18.47■□□□□ 0.55
PTBP1-201ENST00000349038 CHAF1AQ13111 956 aaPredicted RBP18.47■□□□□ 0.55
PTBP1-201ENST00000349038 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
PTBP1-201ENST00000349038 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
PTBP1-201ENST00000349038 KCNJ4P48050 445 aa18.46■□□□□ 0.55
PTBP1-201ENST00000349038 NAA30Q147X3 362 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-201ENST00000349038 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-201ENST00000349038 CDC45O75419 566 aa18.46■□□□□ 0.55
PTBP1-201ENST00000349038 TERF1P54274 439 aa18.46■□□□□ 0.55
PTBP1-201ENST00000349038 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
PTBP1-201ENST00000349038 ST18O60284 1047 aa18.46■□□□□ 0.55
PTBP1-201ENST00000349038 ADCY5O95622 1261 aa18.46■□□□□ 0.55
PTBP1-201ENST00000349038 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTBP1-201ENST00000349038 V9GYY5 206 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-201ENST00000349038 FBLN1P23142 703 aa18.45■□□□□ 0.54
PTBP1-201ENST00000349038 PDLIM2Q96JY6 352 aa18.45■□□□□ 0.54
PTBP1-201ENST00000349038 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
PTBP1-201ENST00000349038 AEBP1Q8IUX7 1158 aa18.45■□□□□ 0.54
PTBP1-201ENST00000349038 ZBTB9Q96C00 473 aa18.45■□□□□ 0.54
PTBP1-201ENST00000349038 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
PTBP1-201ENST00000349038 DRC7Q8IY82 874 aa18.44■□□□□ 0.54
PTBP1-201ENST00000349038 IPO8O15397 1037 aaKnown RBP18.43■□□□□ 0.54
PTBP1-201ENST00000349038 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
PTBP1-201ENST00000349038 RIOK3O14730 519 aaKnown RBP18.43■□□□□ 0.54
PTBP1-201ENST00000349038 HS1BP3Q53T59 392 aa18.42■□□□□ 0.54
PTBP1-201ENST00000349038 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
PTBP1-201ENST00000349038 RABEP1Q15276 862 aa18.42■□□□□ 0.54
PTBP1-201ENST00000349038 MED14O60244 1454 aa18.41■□□□□ 0.54
PTBP1-201ENST00000349038 C16orf45Q96MC5 204 aaPredicted RBP18.41■□□□□ 0.54
PTBP1-201ENST00000349038 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
PTBP1-201ENST00000349038 ZDHHC9Q9Y397 364 aa18.41■□□□□ 0.54
PTBP1-201ENST00000349038 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
PTBP1-201ENST00000349038 FIBPO43427 364 aa18.4■□□□□ 0.54
PTBP1-201ENST00000349038 GSPT1P15170 499 aaKnown RBP18.4■□□□□ 0.54
PTBP1-201ENST00000349038 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
PTBP1-201ENST00000349038 CAMSAP1Q5T5Y3 1602 aa18.39■□□□□ 0.53
PTBP1-201ENST00000349038 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.53
PTBP1-201ENST00000349038 HECW2Q9P2P5 1572 aa18.39■□□□□ 0.53
PTBP1-201ENST00000349038 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
PTBP1-201ENST00000349038 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
PTBP1-201ENST00000349038 HMOX1P09601 288 aa18.38■□□□□ 0.53
PTBP1-201ENST00000349038 UTP14CQ5TAP6 766 aaKnown RBP18.38■□□□□ 0.53
PTBP1-201ENST00000349038 GIMAP6Q6P9H5 292 aa18.38■□□□□ 0.53
PTBP1-201ENST00000349038 PAXIP1Q6ZW49 1069 aaPredicted RBP18.38■□□□□ 0.53
PTBP1-201ENST00000349038 IFT57Q9NWB7 429 aa18.38■□□□□ 0.53
PTBP1-201ENST00000349038 RICTORQ6R327 1708 aa18.38■□□□□ 0.53
PTBP1-201ENST00000349038 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
PTBP1-201ENST00000349038 PIK3C2BO00750 1634 aa18.37■□□□□ 0.53
PTBP1-201ENST00000349038 GTPBP4Q9BZE4 634 aaKnown RBP18.37■□□□□ 0.53
PTBP1-201ENST00000349038 TMEM51Q9NW97 253 aa18.37■□□□□ 0.53
PTBP1-201ENST00000349038 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
PTBP1-201ENST00000349038 LETM1O95202 739 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-201ENST00000349038 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
PTBP1-201ENST00000349038 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
PTBP1-201ENST00000349038 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
PTBP1-201ENST00000349038 RILPL2Q969X0 211 aa18.36■□□□□ 0.53
PTBP1-201ENST00000349038 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-201ENST00000349038 ABCC3O15438 1527 aa18.36■□□□□ 0.53
PTBP1-201ENST00000349038 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 MCM5P33992 734 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 ANO2Q9NQ90 1003 aa18.35■□□□□ 0.53
PTBP1-201ENST00000349038 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 KIF20AO95235 890 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-201ENST00000349038 STK26Q9P289 416 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 TRIM6-TRIM34B2RNG4 842 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 FYB1O15117 783 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-201ENST00000349038 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 CLEC17AQ6ZS10 378 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 TMX3Q96JJ7 454 aa18.34■□□□□ 0.53
PTBP1-201ENST00000349038 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.53
PTBP1-201ENST00000349038 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.53
PTBP1-201ENST00000349038 PRIMPOLQ96LW4 560 aa18.33■□□□□ 0.52
PTBP1-201ENST00000349038 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
PTBP1-201ENST00000349038 REREQ9P2R6 1566 aa18.33■□□□□ 0.52
PTBP1-201ENST00000349038 PTCH1Q13635 1447 aa18.32■□□□□ 0.52
PTBP1-201ENST00000349038 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
PTBP1-201ENST00000349038 MBD3O95983 291 aa18.32■□□□□ 0.52
PTBP1-201ENST00000349038 INTS3Q68E01 1043 aaKnown RBP18.32■□□□□ 0.52
PTBP1-201ENST00000349038 SIGLEC1Q9BZZ2 1709 aa18.32■□□□□ 0.52
PTBP1-201ENST00000349038 SDSP20132 328 aa18.32■□□□□ 0.52
PTBP1-201ENST00000349038 CAMK4Q16566 473 aa18.32■□□□□ 0.52
PTBP1-201ENST00000349038 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
PTBP1-201ENST00000349038 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
PTBP1-201ENST00000349038 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
PTBP1-201ENST00000349038 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
PTBP1-201ENST00000349038 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
PTBP1-201ENST00000349038 ARHGAP31Q2M1Z3 1444 aa18.31■□□□□ 0.52
PTBP1-201ENST00000349038 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
PTBP1-201ENST00000349038 PLEKHM2Q8IWE5 1019 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 ARHGAP45Q92619 1136 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 MLH3Q9UHC1 1453 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms