RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 PIP4K2AP48426 406 aaPredicted RBP18.12■□□□□ 0.49
SBF1-201ENST00000348911 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
SBF1-201ENST00000348911 FILIP1Q7Z7B0 1213 aa18.12■□□□□ 0.49
SBF1-201ENST00000348911 XPCQ01831 940 aaPredicted RBP18.12■□□□□ 0.49
SBF1-201ENST00000348911 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.12■□□□□ 0.498e-7■■■■□ 22.8
SBF1-201ENST00000348911 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
SBF1-201ENST00000348911 PPFIBP1Q86W92 1011 aa18.12■□□□□ 0.49
SBF1-201ENST00000348911 CCDC83Q8IWF9 413 aa18.12■□□□□ 0.49
SBF1-201ENST00000348911 KRT32Q14532 448 aa18.11■□□□□ 0.49
SBF1-201ENST00000348911 ZNF530Q6P9A1 599 aaPredicted RBP18.11■□□□□ 0.49
SBF1-201ENST00000348911 ESCO1Q5FWF5 840 aa18.11■□□□□ 0.49
SBF1-201ENST00000348911 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
SBF1-201ENST00000348911 TXLNAP40222 546 aa18.11■□□□□ 0.49
SBF1-201ENST00000348911 FAM177A1Q8N128 213 aaPredicted RBP18.11■□□□□ 0.49
SBF1-201ENST00000348911 H0YHG0 523 aa18.11■□□□□ 0.49
SBF1-201ENST00000348911 MIS18AQ9NYP9 233 aa18.11■□□□□ 0.49
SBF1-201ENST00000348911 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
SBF1-201ENST00000348911 MCM10Q7L590 875 aa18.1■□□□□ 0.49
SBF1-201ENST00000348911 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
SBF1-201ENST00000348911 ATF3P18847 181 aa18.1■□□□□ 0.49
SBF1-201ENST00000348911 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
SBF1-201ENST00000348911 TBC1D9Q6ZT07 1266 aa18.09■□□□□ 0.49
SBF1-201ENST00000348911 MYL6BP14649 208 aa18.09■□□□□ 0.49
SBF1-201ENST00000348911 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
SBF1-201ENST00000348911 RAB11FIP3O75154 756 aa18.08■□□□□ 0.49
SBF1-201ENST00000348911 PRKCSHP14314 528 aaPredicted RBP18.08■□□□□ 0.49
SBF1-201ENST00000348911 AXDND1Q5T1B0 1012 aaPredicted RBP18.08■□□□□ 0.49
SBF1-201ENST00000348911 KIF1BPQ96EK5 621 aa18.08■□□□□ 0.49
SBF1-201ENST00000348911 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.49
SBF1-201ENST00000348911 BMP2KLQ5H9B9 411 aa18.08■□□□□ 0.49
SBF1-201ENST00000348911 PRPF40BQ6NWY9 871 aaKnown RBP18.08■□□□□ 0.49
SBF1-201ENST00000348911 TRIM22Q8IYM9 498 aa18.08■□□□□ 0.49
SBF1-201ENST00000348911 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
SBF1-201ENST00000348911 BTBD11A6QL63 1104 aa18.08■□□□□ 0.48
SBF1-201ENST00000348911 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
SBF1-201ENST00000348911 CCDC69A6NI79 296 aa18.07■□□□□ 0.48
SBF1-201ENST00000348911 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
SBF1-201ENST00000348911 TATP17735 454 aaPredicted RBP18.07■□□□□ 0.48
SBF1-201ENST00000348911 KIF14Q15058 1648 aa18.07■□□□□ 0.48
SBF1-201ENST00000348911 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
SBF1-201ENST00000348911 SMTNL1A8MU46 457 aa18.07■□□□□ 0.48
SBF1-201ENST00000348911 ZNHIT6Q9NWK9 470 aaKnown RBP18.07■□□□□ 0.48
SBF1-201ENST00000348911 ERLIN1O75477 346 aa18.06■□□□□ 0.48
SBF1-201ENST00000348911 BAG4O95429 457 aaKnown RBP18.06■□□□□ 0.48
SBF1-201ENST00000348911 GLRX3O76003 335 aaKnown RBP18.06■□□□□ 0.48
SBF1-201ENST00000348911 CT47A1Q5JQC4 288 aaPredicted RBP18.06■□□□□ 0.48
SBF1-201ENST00000348911 CCDC43Q96MW1 224 aaKnown RBP18.06■□□□□ 0.48
SBF1-201ENST00000348911 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
SBF1-201ENST00000348911 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
SBF1-201ENST00000348911 FKBP4Q02790 459 aaKnown RBP eCLIP18.05■□□□□ 0.484e-6■■■■■ 31.1
SBF1-201ENST00000348911 STK11IPQ8N1F8 1099 aa18.05■□□□□ 0.48
SBF1-201ENST00000348911 CTDP1Q9Y5B0 961 aaPredicted RBP18.05■□□□□ 0.48
SBF1-201ENST00000348911 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
SBF1-201ENST00000348911 CDKL5O76039 1030 aa18.05■□□□□ 0.48
SBF1-201ENST00000348911 FAM177BA6PVY3 158 aa18.05■□□□□ 0.48
SBF1-201ENST00000348911 CDK5RAP3Q96JB5 506 aa18.05■□□□□ 0.48
SBF1-201ENST00000348911 USP25Q9UHP3 1055 aa18.05■□□□□ 0.48
SBF1-201ENST00000348911 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
SBF1-201ENST00000348911 SLC3A2P08195 630 aaKnown RBP18.04■□□□□ 0.48
SBF1-201ENST00000348911 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
SBF1-201ENST00000348911 CTNNA3Q9UI47 895 aa18.04■□□□□ 0.48
SBF1-201ENST00000348911 C8orf34Q49A92 452 aa18.04■□□□□ 0.48
SBF1-201ENST00000348911 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
SBF1-201ENST00000348911 EIF3JO75822 258 aaKnown RBP18.04■□□□□ 0.48
SBF1-201ENST00000348911 SKIDA1Q1XH10 827 aa18.04■□□□□ 0.48
SBF1-201ENST00000348911 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
SBF1-201ENST00000348911 CBX1P83916 185 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 PDCL3Q9H2J4 239 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 ADGRF5Q8IZF2 1346 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 CABP4P57796 275 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 KLHL40Q2TBA0 621 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 ZSCAN25Q6NSZ9 544 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 NACAP1Q9BZK3 213 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 PTPN14Q15678 1187 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 MYO6Q9UM54 1294 aa18.03■□□□□ 0.48
SBF1-201ENST00000348911 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.48
SBF1-201ENST00000348911 PRDM10Q9NQV6 1147 aa18.02■□□□□ 0.48
SBF1-201ENST00000348911 F6X3S4 739 aa18.02■□□□□ 0.48
SBF1-201ENST00000348911 NUP133Q8WUM0 1156 aa18.02■□□□□ 0.48
SBF1-201ENST00000348911 LIMCH1Q9UPQ0 1083 aa18.02■□□□□ 0.48
SBF1-201ENST00000348911 CCDC57Q2TAC2 916 aa18.02■□□□□ 0.47
SBF1-201ENST00000348911 RBM27Q9P2N5 1060 aaKnown RBP18.02■□□□□ 0.47
SBF1-201ENST00000348911 RDXP35241 583 aaKnown RBP18.02■□□□□ 0.47
SBF1-201ENST00000348911 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.47
SBF1-201ENST00000348911 UBXN4Q92575 508 aa18.02■□□□□ 0.47
SBF1-201ENST00000348911 ERICH4A6NGS2 130 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 KIF2AO00139 706 aaPredicted RBP18.01■□□□□ 0.47
SBF1-201ENST00000348911 MCM5P33992 734 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
SBF1-201ENST00000348911 STIM1Q13586 685 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 ZSCAN23Q3MJ62 389 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 NUCB1Q02818 461 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
SBF1-201ENST00000348911 PTPRKQ15262 1439 aa18■□□□□ 0.47
SBF1-201ENST00000348911 CFAP100Q494V2 611 aa18■□□□□ 0.47
SBF1-201ENST00000348911 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
SBF1-201ENST00000348911 TTC22Q5TAA0 569 aa18■□□□□ 0.47
SBF1-201ENST00000348911 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms