RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-202ENST00000346436 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
CLCN6-202ENST00000346436 TMEM87AQ8NBN3 555 aa13.03□□□□□ -0.32
CLCN6-202ENST00000346436 MAP4K4O95819 1239 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-202ENST00000346436 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
CLCN6-202ENST00000346436 ZSCAN25Q6NSZ9 544 aa13.03□□□□□ -0.32
CLCN6-202ENST00000346436 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-202ENST00000346436 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
CLCN6-202ENST00000346436 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.32
CLCN6-202ENST00000346436 PDE4CQ08493 712 aa13.02□□□□□ -0.32
CLCN6-202ENST00000346436 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.32
CLCN6-202ENST00000346436 TTC39AQ5SRH9 613 aa13.02□□□□□ -0.32
CLCN6-202ENST00000346436 GRPEL1Q9HAV7 217 aa13.02□□□□□ -0.32
CLCN6-202ENST00000346436 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.32
CLCN6-202ENST00000346436 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
CLCN6-202ENST00000346436 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
CLCN6-202ENST00000346436 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
CLCN6-202ENST00000346436 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-202ENST00000346436 NF2P35240 595 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 MCM10Q7L590 875 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
CLCN6-202ENST00000346436 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
CLCN6-202ENST00000346436 ASXL1Q8IXJ9 1541 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 GCC2Q8IWJ2 1684 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 VPS37CA5D8V6 355 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-202ENST00000346436 FOXO3O43524 673 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 PHF14O94880 888 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 HDGFL1Q5TGJ6 251 aa13.01□□□□□ -0.33
CLCN6-202ENST00000346436 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
CLCN6-202ENST00000346436 ST5P78524 1137 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 NME9Q86XW9 330 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 RFC4P35249 363 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 FCHSD2O94868 740 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 FOSBP53539 338 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 NFE2L2Q16236 605 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
CLCN6-202ENST00000346436 STK32BQ9NY57 414 aa13□□□□□ -0.33
CLCN6-202ENST00000346436 A2MP01023 1474 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 A0A0U1RQG5 324 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-202ENST00000346436 MYO1BO43795 1136 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 TRAPPC8Q9Y2L5 1435 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 IDI1Q13907 227 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 TBC1D32Q96NH3 1257 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
CLCN6-202ENST00000346436 RABEP1Q15276 862 aa12.99□□□□□ -0.33
CLCN6-202ENST00000346436 HIP1O00291 1037 aa12.98□□□□□ -0.33
CLCN6-202ENST00000346436 TRIM21P19474 475 aaKnown RBP12.98□□□□□ -0.33
CLCN6-202ENST00000346436 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
CLCN6-202ENST00000346436 DNAI2Q9GZS0 605 aa12.98□□□□□ -0.33
CLCN6-202ENST00000346436 COL17A1Q9UMD9 1497 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-202ENST00000346436 BAG6P46379 1132 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 MTMR7Q9Y216 660 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 FANCAO15360 1455 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
CLCN6-202ENST00000346436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.97□□□□□ -0.332e-7■■■■■ 236
CLCN6-202ENST00000346436 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
CLCN6-202ENST00000346436 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
CLCN6-202ENST00000346436 SSFA2P28290 1259 aa12.96□□□□□ -0.33
CLCN6-202ENST00000346436 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-202ENST00000346436 ZNF622Q969S3 477 aaKnown RBP eCLIP12.96□□□□□ -0.334e-6■■□□□ 13.5
CLCN6-202ENST00000346436 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
CLCN6-202ENST00000346436 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
CLCN6-202ENST00000346436 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.34
CLCN6-202ENST00000346436 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.34
CLCN6-202ENST00000346436 TNPO1Q92973 898 aaKnown RBP12.96□□□□□ -0.34
CLCN6-202ENST00000346436 MPHOSPH6Q99547 160 aaKnown RBP12.96□□□□□ -0.34
CLCN6-202ENST00000346436 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
CLCN6-202ENST00000346436 F6X3S4 739 aa12.95□□□□□ -0.34
CLCN6-202ENST00000346436 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
CLCN6-202ENST00000346436 GNAI2P04899 355 aa12.95□□□□□ -0.34
CLCN6-202ENST00000346436 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
CLCN6-202ENST00000346436 LMOD1P29536 600 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-202ENST00000346436 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-202ENST00000346436 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
CLCN6-202ENST00000346436 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
CLCN6-202ENST00000346436 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
CLCN6-202ENST00000346436 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
CLCN6-202ENST00000346436 PCMTD1Q96MG8 357 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-202ENST00000346436 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
CLCN6-202ENST00000346436 MYL6BP14649 208 aa12.94□□□□□ -0.34
CLCN6-202ENST00000346436 DUOX2Q9NRD8 1548 aa12.94□□□□□ -0.34
CLCN6-202ENST00000346436 WDR78Q5VTH9 848 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 PANK2Q9BZ23 570 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 TSHZ3Q63HK5 1081 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 RAI14Q9P0K7 980 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 DDB1Q16531 1140 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
CLCN6-202ENST00000346436 KDM5BQ9UGL1 1544 aa12.93□□□□□ -0.34
CLCN6-202ENST00000346436 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms