RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 AMPHP49418 695 aa23.74■■□□□ 1.39
LYSMD4-202ENST00000344791 XRCC6P12956 609 aaKnown RBP eCLIP23.73■■□□□ 1.39
LYSMD4-202ENST00000344791 CEP85Q6P2H3 762 aa23.73■■□□□ 1.39
LYSMD4-202ENST00000344791 AMOTL2Q9Y2J4 779 aa23.73■■□□□ 1.39
LYSMD4-202ENST00000344791 L1TD1Q5T7N2 865 aaKnown RBP23.72■■□□□ 1.39
LYSMD4-202ENST00000344791 TSHZ3Q63HK5 1081 aa23.72■■□□□ 1.39
LYSMD4-202ENST00000344791 INTS3Q68E01 1043 aaKnown RBP23.72■■□□□ 1.39
LYSMD4-202ENST00000344791 SNX21Q969T3 373 aa23.72■■□□□ 1.39
LYSMD4-202ENST00000344791 C14orf37Q86TY3 774 aa23.71■■□□□ 1.39
LYSMD4-202ENST00000344791 GAS2L2Q8NHY3 880 aa23.71■■□□□ 1.39
LYSMD4-202ENST00000344791 K7ELQ4 463 aaPredicted RBP23.71■■□□□ 1.39
LYSMD4-202ENST00000344791 ANKRD44Q8N8A2 993 aa23.71■■□□□ 1.39
LYSMD4-202ENST00000344791 TTC22Q5TAA0 569 aa23.7■■□□□ 1.39
LYSMD4-202ENST00000344791 ADAMTS13Q76LX8 1427 aa23.7■■□□□ 1.38
LYSMD4-202ENST00000344791 MON2Q7Z3U7 1717 aa23.7■■□□□ 1.38
LYSMD4-202ENST00000344791 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
LYSMD4-202ENST00000344791 C3P01024 1663 aa23.69■■□□□ 1.38
LYSMD4-202ENST00000344791 ITSN1Q15811 1721 aa23.69■■□□□ 1.38
LYSMD4-202ENST00000344791 USP6P35125 1406 aa23.69■■□□□ 1.38
LYSMD4-202ENST00000344791 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
LYSMD4-202ENST00000344791 TECPR2O15040 1411 aa23.68■■□□□ 1.38
LYSMD4-202ENST00000344791 SDSP20132 328 aa23.68■■□□□ 1.38
LYSMD4-202ENST00000344791 SIRT1Q96EB6 747 aa23.68■■□□□ 1.38
LYSMD4-202ENST00000344791 RGS12O14924 1447 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 SSFA2P28290 1259 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 EXOC6BQ9Y2D4 811 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 RTL1A6NKG5 1358 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 PLEKHG3A1L390 1219 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 DDX11L8A8MPP1 907 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 NLRP6P59044 892 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 RBM33Q96EV2 1170 aaKnown RBP23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 EYA1Q99502 592 aa23.67■■□□□ 1.38
LYSMD4-202ENST00000344791 DDIT3P35638 169 aa23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 OVOS2A0A0J9YW53 1432 aa23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 OVOS2Q6IE36 1432 aa23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 ZBTB7CA1YPR0 619 aa23.66■■□□□ 1.38
LYSMD4-202ENST00000344791 RPAP2Q8IXW5 612 aaPredicted RBP23.65■■□□□ 1.38
LYSMD4-202ENST00000344791 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
LYSMD4-202ENST00000344791 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.38
LYSMD4-202ENST00000344791 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.38
LYSMD4-202ENST00000344791 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
LYSMD4-202ENST00000344791 RIMS1Q86UR5 1692 aaKnown RBP23.63■■□□□ 1.37
LYSMD4-202ENST00000344791 NCOA3Q9Y6Q9 1424 aa23.63■■□□□ 1.37
LYSMD4-202ENST00000344791 FKBP5Q13451 457 aaPredicted RBP23.63■■□□□ 1.37
LYSMD4-202ENST00000344791 RAB3GAP1Q15042 981 aa23.63■■□□□ 1.37
LYSMD4-202ENST00000344791 GBP4Q96PP9 640 aa23.63■■□□□ 1.37
LYSMD4-202ENST00000344791 AKAP12Q02952 1782 aa23.63■■□□□ 1.37
LYSMD4-202ENST00000344791 RRAGDQ9NQL2 400 aaPredicted RBP23.62■■□□□ 1.37
LYSMD4-202ENST00000344791 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
LYSMD4-202ENST00000344791 PTPRCP08575 1304 aa23.62■■□□□ 1.37
LYSMD4-202ENST00000344791 CRB1P82279 1406 aa23.61■■□□□ 1.37
LYSMD4-202ENST00000344791 STK31Q9BXU1 1019 aa23.61■■□□□ 1.37
LYSMD4-202ENST00000344791 FSD2A1L4K1 749 aa23.6■■□□□ 1.37
LYSMD4-202ENST00000344791 FAM43AQ8N2R8 423 aa23.6■■□□□ 1.37
LYSMD4-202ENST00000344791 USP26Q9BXU7 913 aa23.6■■□□□ 1.37
LYSMD4-202ENST00000344791 KIAA0232Q92628 1395 aa23.59■■□□□ 1.37
LYSMD4-202ENST00000344791 PKP1Q13835 747 aa23.58■■□□□ 1.37
LYSMD4-202ENST00000344791 CASC1Q6TDU7 716 aa23.58■■□□□ 1.36
LYSMD4-202ENST00000344791 FLT4P35916 1363 aa23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 FOXD4L5Q5VV16 416 aaPredicted RBP23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 NOL8Q76FK4 1167 aaKnown RBP23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 FOXD4L4Q8WXT5 416 aaPredicted RBP23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 AK9Q5TCS8 1911 aa23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 UBR1Q8IWV7 1749 aa23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 PLEKHG1Q9ULL1 1385 aa23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 GAS2L3Q86XJ1 694 aa23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 GRPEL1Q9HAV7 217 aa23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 CIZ1Q9ULV3 898 aaPredicted RBP23.57■■□□□ 1.36
LYSMD4-202ENST00000344791 HMMRO75330 724 aa23.56■■□□□ 1.36
LYSMD4-202ENST00000344791 ABTB2Q8N961 1025 aa23.56■■□□□ 1.36
LYSMD4-202ENST00000344791 NCLP19338 710 aaKnown RBP23.56■■□□□ 1.36
LYSMD4-202ENST00000344791 FLIIQ13045 1269 aa23.56■■□□□ 1.36
LYSMD4-202ENST00000344791 KIF24Q5T7B8 1368 aa23.56■■□□□ 1.36
LYSMD4-202ENST00000344791 PNMA6EA0A0J9YXQ4 647 aa23.55■■□□□ 1.36
LYSMD4-202ENST00000344791 RABEP1Q15276 862 aa23.55■■□□□ 1.36
LYSMD4-202ENST00000344791 CHAMP1Q96JM3 812 aa23.55■■□□□ 1.36
LYSMD4-202ENST00000344791 NRKQ7Z2Y5 1582 aa23.55■■□□□ 1.36
LYSMD4-202ENST00000344791 CEP170BQ9Y4F5 1589 aaPredicted RBP23.55■■□□□ 1.36
LYSMD4-202ENST00000344791 ZGPATQ8N5A5 531 aaKnown RBP23.54■■□□□ 1.36
LYSMD4-202ENST00000344791 RILPL2Q969X0 211 aa23.54■■□□□ 1.36
LYSMD4-202ENST00000344791 USP31Q70CQ4 1352 aa23.54■■□□□ 1.36
LYSMD4-202ENST00000344791 TRIM6-TRIM34B2RNG4 842 aa23.54■■□□□ 1.36
LYSMD4-202ENST00000344791 GNAI2P04899 355 aa23.54■■□□□ 1.36
LYSMD4-202ENST00000344791 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 PDE1AP54750 535 aa23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 MCTP1Q6DN14 999 aa23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 KCNA6P17658 529 aa23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 EIF2S2P20042 333 aaKnown RBP23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 CCT4P50991 539 aaKnown RBP23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 ARHGEF10O15013 1369 aa23.53■■□□□ 1.36
LYSMD4-202ENST00000344791 GNAT3A8MTJ3 354 aa23.52■■□□□ 1.36
LYSMD4-202ENST00000344791 MRE11P49959 708 aa23.52■■□□□ 1.36
LYSMD4-202ENST00000344791 DDX49Q9Y6V7 483 aaKnown RBP23.52■■□□□ 1.36
LYSMD4-202ENST00000344791 TTC21AQ8NDW8 1320 aa23.51■■□□□ 1.35
LYSMD4-202ENST00000344791 LRRFIP2Q9Y608 721 aaKnown RBP23.51■■□□□ 1.35
LYSMD4-202ENST00000344791 IL1RAPL2Q9NP60 686 aa23.51■■□□□ 1.35
LYSMD4-202ENST00000344791 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms