RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
CCDC38-201ENST00000344280 NUTM2GQ5VZR2 741 aa26.79■■□□□ 1.88
CCDC38-201ENST00000344280 FMN2Q9NZ56 1722 aa26.79■■□□□ 1.88
CCDC38-201ENST00000344280 CEP170BQ9Y4F5 1589 aaPredicted RBP26.79■■□□□ 1.88
CCDC38-201ENST00000344280 AMPHP49418 695 aa26.79■■□□□ 1.88
CCDC38-201ENST00000344280 PIK3C2AO00443 1686 aa26.79■■□□□ 1.88
CCDC38-201ENST00000344280 KIF24Q5T7B8 1368 aa26.78■■□□□ 1.88
CCDC38-201ENST00000344280 KCNA6P17658 529 aa26.78■■□□□ 1.88
CCDC38-201ENST00000344280 FER1L4A9Z1Z3 1794 aa26.78■■□□□ 1.88
CCDC38-201ENST00000344280 RBM25P49756 843 aaKnown RBP26.78■■□□□ 1.88
CCDC38-201ENST00000344280 KDRP35968 1356 aa26.77■■□□□ 1.88
CCDC38-201ENST00000344280 MSH6P52701 1360 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 ATP10DQ9P241 1426 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 NLRP6P59044 892 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 IL27Q8NEV9 243 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 SLC4A2P04920 1241 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 TBC1D9Q6ZT07 1266 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 DCTPP1Q9H773 170 aa26.76■■□□□ 1.87
CCDC38-201ENST00000344280 IGSF1Q8N6C5 1336 aa26.75■■□□□ 1.87
CCDC38-201ENST00000344280 TSPYL4Q9UJ04 414 aa26.74■■□□□ 1.87
CCDC38-201ENST00000344280 HAP1P54257 671 aaPredicted RBP26.74■■□□□ 1.87
CCDC38-201ENST00000344280 RTF1Q92541 710 aaKnown RBP26.74■■□□□ 1.87
CCDC38-201ENST00000344280 MEIS3Q99687 375 aa26.74■■□□□ 1.87
CCDC38-201ENST00000344280 XRN1Q8IZH2 1706 aaKnown RBP26.73■■□□□ 1.87
CCDC38-201ENST00000344280 C16orf71Q8IYS4 520 aaPredicted RBP26.73■■□□□ 1.87
CCDC38-201ENST00000344280 GSPT1P15170 499 aaKnown RBP26.73■■□□□ 1.87
CCDC38-201ENST00000344280 G2E3Q7L622 706 aa26.73■■□□□ 1.87
CCDC38-201ENST00000344280 ANKRD44Q8N8A2 993 aa26.73■■□□□ 1.87
CCDC38-201ENST00000344280 CEP85Q6P2H3 762 aa26.72■■□□□ 1.87
CCDC38-201ENST00000344280 PLEKHM2Q8IWE5 1019 aa26.72■■□□□ 1.87
CCDC38-201ENST00000344280 PTPRCP08575 1304 aa26.72■■□□□ 1.87
CCDC38-201ENST00000344280 KIF2CQ99661 725 aa26.72■■□□□ 1.87
CCDC38-201ENST00000344280 RTL1A6NKG5 1358 aa26.71■■□□□ 1.87
CCDC38-201ENST00000344280 HSCBQ8IWL3 235 aa26.7■■□□□ 1.87
CCDC38-201ENST00000344280 F6X3S4 739 aa26.69■■□□□ 1.86
CCDC38-201ENST00000344280 OTUD7AQ8TE49 926 aaPredicted RBP26.69■■□□□ 1.86
CCDC38-201ENST00000344280 HOXC9P31274 260 aa26.69■■□□□ 1.86
CCDC38-201ENST00000344280 BRPF3Q9ULD4 1205 aa26.69■■□□□ 1.86
CCDC38-201ENST00000344280 GAS2L2Q8NHY3 880 aa26.67■■□□□ 1.86
CCDC38-201ENST00000344280 MARF1Q9Y4F3 1742 aaKnown RBP26.67■■□□□ 1.86
CCDC38-201ENST00000344280 RPAP2Q8IXW5 612 aaPredicted RBP26.67■■□□□ 1.86
CCDC38-201ENST00000344280 RBM33Q96EV2 1170 aaKnown RBP26.67■■□□□ 1.86
CCDC38-201ENST00000344280 ANKARQ7Z5J8 1434 aa26.66■■□□□ 1.86
CCDC38-201ENST00000344280 APBB1O00213 710 aa26.66■■□□□ 1.86
CCDC38-201ENST00000344280 ABTB2Q8N961 1025 aa26.66■■□□□ 1.86
CCDC38-201ENST00000344280 LTV1Q96GA3 475 aaPredicted RBP26.66■■□□□ 1.86
CCDC38-201ENST00000344280 SMARCA5O60264 1052 aaPredicted RBP26.65■■□□□ 1.86
CCDC38-201ENST00000344280 SLC4A10Q6U841 1118 aa26.65■■□□□ 1.86
CCDC38-201ENST00000344280 CD2BP2O95400 341 aaKnown RBP26.65■■□□□ 1.86
CCDC38-201ENST00000344280 CHMP5Q9NZZ3 219 aa26.65■■□□□ 1.86
CCDC38-201ENST00000344280 SNX21Q969T3 373 aa26.64■■□□□ 1.86
CCDC38-201ENST00000344280 NWD1Q149M9 1564 aa26.64■■□□□ 1.85
CCDC38-201ENST00000344280 CDC45O75419 566 aa26.63■■□□□ 1.85
CCDC38-201ENST00000344280 RBM42Q9BTD8 480 aaKnown RBP26.63■■□□□ 1.85
CCDC38-201ENST00000344280 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
CCDC38-201ENST00000344280 NCOA3Q9Y6Q9 1424 aa26.62■■□□□ 1.85
CCDC38-201ENST00000344280 NECTIN2Q92692 538 aa26.62■■□□□ 1.85
CCDC38-201ENST00000344280 GNAT3A8MTJ3 354 aa26.61■■□□□ 1.85
CCDC38-201ENST00000344280 C14orf37Q86TY3 774 aa26.61■■□□□ 1.85
CCDC38-201ENST00000344280 USHBP1Q8N6Y0 703 aa26.61■■□□□ 1.85
CCDC38-201ENST00000344280 MCM4P33991 863 aa26.6■■□□□ 1.85
CCDC38-201ENST00000344280 DDIT3P35638 169 aa26.6■■□□□ 1.85
CCDC38-201ENST00000344280 IL17REQ8NFR9 667 aa26.6■■□□□ 1.85
CCDC38-201ENST00000344280 RTN4Q9NQC3 1192 aaKnown RBP26.58■■□□□ 1.85
CCDC38-201ENST00000344280 LRRC37A3O60309 1634 aa26.57■■□□□ 1.84
CCDC38-201ENST00000344280 HTATSF1O43719 755 aaKnown RBP26.57■■□□□ 1.84
CCDC38-201ENST00000344280 CCT4P50991 539 aaKnown RBP26.55■■□□□ 1.84
CCDC38-201ENST00000344280 STK31Q9BXU1 1019 aa26.55■■□□□ 1.84
CCDC38-201ENST00000344280 PHF8Q9UPP1 1060 aa26.55■■□□□ 1.84
CCDC38-201ENST00000344280 HSP90AB1P08238 724 aaKnown RBP26.55■■□□□ 1.84
CCDC38-201ENST00000344280 FLIIQ13045 1269 aa26.55■■□□□ 1.84
CCDC38-201ENST00000344280 MAP3K5Q99683 1374 aa26.55■■□□□ 1.84
CCDC38-201ENST00000344280 SDSP20132 328 aa26.54■■□□□ 1.84
CCDC38-201ENST00000344280 FOXD4L1Q9NU39 408 aa26.53■■□□□ 1.84
CCDC38-201ENST00000344280 FKBP5Q13451 457 aaPredicted RBP26.53■■□□□ 1.84
CCDC38-201ENST00000344280 USP54Q70EL1 1684 aa26.52■■□□□ 1.84
CCDC38-201ENST00000344280 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.84
CCDC38-201ENST00000344280 CCDC30Q5VVM6 783 aa26.51■■□□□ 1.84
CCDC38-201ENST00000344280 TAF7Q15545 349 aaPredicted RBP26.5■■□□□ 1.83
CCDC38-201ENST00000344280 FAM208AQ9UK61 1670 aaKnown RBP26.5■■□□□ 1.83
CCDC38-201ENST00000344280 EXOC6BQ9Y2D4 811 aa26.5■■□□□ 1.83
CCDC38-201ENST00000344280 K7ELQ4 463 aaPredicted RBP26.49■■□□□ 1.83
CCDC38-201ENST00000344280 HMMRO75330 724 aa26.49■■□□□ 1.83
CCDC38-201ENST00000344280 GNAI2P04899 355 aa26.49■■□□□ 1.83
CCDC38-201ENST00000344280 USP26Q9BXU7 913 aa26.49■■□□□ 1.83
CCDC38-201ENST00000344280 SETD1BQ9UPS6 1966 aaKnown RBP26.48■■□□□ 1.83
CCDC38-201ENST00000344280 NBPF6Q5VWK0 638 aa26.48■■□□□ 1.83
CCDC38-201ENST00000344280 ANKLE2Q86XL3 938 aa26.48■■□□□ 1.83
CCDC38-201ENST00000344280 NBPF4Q96M43 638 aa26.48■■□□□ 1.83
CCDC38-201ENST00000344280 GZF1Q9H116 711 aaPredicted RBP26.48■■□□□ 1.83
CCDC38-201ENST00000344280 CHD2O14647 1828 aaKnown RBP26.48■■□□□ 1.83
CCDC38-201ENST00000344280 LTN1O94822 1766 aa26.48■■□□□ 1.83
CCDC38-201ENST00000344280 PNMA6EA0A0J9YXQ4 647 aa26.47■■□□□ 1.83
CCDC38-201ENST00000344280 ZBTB7CA1YPR0 619 aa26.46■■□□□ 1.83
CCDC38-201ENST00000344280 IP6K1Q92551 441 aa26.46■■□□□ 1.83
CCDC38-201ENST00000344280 TNPO1Q92973 898 aaKnown RBP26.46■■□□□ 1.83
CCDC38-201ENST00000344280 ESCO1Q5FWF5 840 aa26.46■■□□□ 1.83
CCDC38-201ENST00000344280 TSHZ3Q63HK5 1081 aa26.46■■□□□ 1.83
CCDC38-201ENST00000344280 TRAK2O60296 914 aa26.45■■□□□ 1.82
CCDC38-201ENST00000344280 HSP90AA1P07900 732 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms