RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 LARP1Q6PKG0 1096 aaKnown RBP16.53■□□□□ 0.24
CT55-202ENST00000344129 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.24
CT55-202ENST00000344129 PLEKHO1Q53GL0 409 aaPredicted RBP16.52■□□□□ 0.24
CT55-202ENST00000344129 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
CT55-202ENST00000344129 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
CT55-202ENST00000344129 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
CT55-202ENST00000344129 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
CT55-202ENST00000344129 MEGF6O75095 1541 aa16.51■□□□□ 0.23
CT55-202ENST00000344129 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
CT55-202ENST00000344129 GNAT3A8MTJ3 354 aa16.5■□□□□ 0.23
CT55-202ENST00000344129 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
CT55-202ENST00000344129 HSPA1LP34931 641 aa16.5■□□□□ 0.23
CT55-202ENST00000344129 JCADQ9P266 1359 aa16.5■□□□□ 0.23
CT55-202ENST00000344129 NEFLP07196 543 aa16.5■□□□□ 0.23
CT55-202ENST00000344129 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
CT55-202ENST00000344129 FKBP8Q14318 412 aa16.49■□□□□ 0.23
CT55-202ENST00000344129 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
CT55-202ENST00000344129 GNAI1P63096 354 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
CT55-202ENST00000344129 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
CT55-202ENST00000344129 CRB1P82279 1406 aa16.47■□□□□ 0.23
CT55-202ENST00000344129 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
CT55-202ENST00000344129 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
CT55-202ENST00000344129 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
CT55-202ENST00000344129 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
CT55-202ENST00000344129 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
CT55-202ENST00000344129 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
CT55-202ENST00000344129 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
CT55-202ENST00000344129 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
CT55-202ENST00000344129 LGR6Q9HBX8 967 aa16.45■□□□□ 0.22
CT55-202ENST00000344129 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
CT55-202ENST00000344129 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
CT55-202ENST00000344129 PLIN1O60240 522 aa16.44■□□□□ 0.22
CT55-202ENST00000344129 C8orf37Q96NL8 207 aa16.44■□□□□ 0.22
CT55-202ENST00000344129 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
CT55-202ENST00000344129 CHL1O00533 1208 aa16.43■□□□□ 0.22
CT55-202ENST00000344129 BCAR3O75815 825 aa16.43■□□□□ 0.22
CT55-202ENST00000344129 IL2RBP14784 551 aa16.43■□□□□ 0.22
CT55-202ENST00000344129 NRAPQ86VF7 1730 aa16.43■□□□□ 0.22
CT55-202ENST00000344129 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
CT55-202ENST00000344129 LRP6O75581 1613 aa16.42■□□□□ 0.22
CT55-202ENST00000344129 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
CT55-202ENST00000344129 PHKG2P15735 406 aa16.42■□□□□ 0.22
CT55-202ENST00000344129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
CT55-202ENST00000344129 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
CT55-202ENST00000344129 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
CT55-202ENST00000344129 CYP27B1O15528 508 aa16.41■□□□□ 0.22
CT55-202ENST00000344129 RNMTO43148 476 aaKnown RBP16.41■□□□□ 0.22
CT55-202ENST00000344129 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
CT55-202ENST00000344129 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
CT55-202ENST00000344129 NGLY1Q96IV0 654 aa16.41■□□□□ 0.22
CT55-202ENST00000344129 BCL2L13Q9BXK5 485 aa16.41■□□□□ 0.22
CT55-202ENST00000344129 SPATA31A6Q5VVP1 1343 aa16.41■□□□□ 0.22
CT55-202ENST00000344129 CEMIPQ8WUJ3 1361 aa16.41■□□□□ 0.22
CT55-202ENST00000344129 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
CT55-202ENST00000344129 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
CT55-202ENST00000344129 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
CT55-202ENST00000344129 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
CT55-202ENST00000344129 SLIT2O94813 1529 aa16.4■□□□□ 0.22
CT55-202ENST00000344129 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
CT55-202ENST00000344129 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
CT55-202ENST00000344129 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
CT55-202ENST00000344129 TEFQ10587 303 aa16.39■□□□□ 0.21
CT55-202ENST00000344129 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
CT55-202ENST00000344129 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
CT55-202ENST00000344129 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
CT55-202ENST00000344129 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
CT55-202ENST00000344129 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
CT55-202ENST00000344129 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
CT55-202ENST00000344129 DDX54Q8TDD1 881 aaKnown RBP16.37■□□□□ 0.21
CT55-202ENST00000344129 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
CT55-202ENST00000344129 PCDH11XQ9BZA7 1347 aa16.37■□□□□ 0.21
CT55-202ENST00000344129 PCDH11YQ9BZA8 1340 aa16.37■□□□□ 0.21
CT55-202ENST00000344129 VAMP4O75379 141 aa16.36■□□□□ 0.21
CT55-202ENST00000344129 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
CT55-202ENST00000344129 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
CT55-202ENST00000344129 UNC5CLQ8IV45 518 aa16.36■□□□□ 0.21
CT55-202ENST00000344129 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
CT55-202ENST00000344129 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
CT55-202ENST00000344129 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
CT55-202ENST00000344129 DISP2A7MBM2 1401 aa16.35■□□□□ 0.21
CT55-202ENST00000344129 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
CT55-202ENST00000344129 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
CT55-202ENST00000344129 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
CT55-202ENST00000344129 SCN11AQ9UI33 1791 aa16.35■□□□□ 0.21
CT55-202ENST00000344129 SPATA31A5Q5VU36 1347 aa16.34■□□□□ 0.21
CT55-202ENST00000344129 SPATA31A7Q8IWB4 1347 aa16.34■□□□□ 0.21
CT55-202ENST00000344129 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
CT55-202ENST00000344129 KCNQ3O43525 872 aa16.34■□□□□ 0.21
CT55-202ENST00000344129 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
CT55-202ENST00000344129 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.34■□□□□ 0.21
CT55-202ENST00000344129 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
CT55-202ENST00000344129 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
CT55-202ENST00000344129 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.21
CT55-202ENST00000344129 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms