RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 RGS12O14924 1447 aa29.76■■■□□ 2.36
NELFB-201ENST00000343053 ROBO2Q9HCK4 1378 aa29.76■■■□□ 2.35
NELFB-201ENST00000343053 F6X3S4 739 aa29.76■■■□□ 2.35
NELFB-201ENST00000343053 ACEP12821 1306 aa29.76■■■□□ 2.35
NELFB-201ENST00000343053 INTS3Q68E01 1043 aaKnown RBP29.75■■■□□ 2.35
NELFB-201ENST00000343053 CIZ1Q9ULV3 898 aaPredicted RBP29.75■■■□□ 2.35
NELFB-201ENST00000343053 ANKRD44Q8N8A2 993 aa29.75■■■□□ 2.35
NELFB-201ENST00000343053 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
NELFB-201ENST00000343053 SLC4A2P04920 1241 aa29.74■■■□□ 2.35
NELFB-201ENST00000343053 PLPPR3Q6T4P5 718 aa29.73■■■□□ 2.35
NELFB-201ENST00000343053 SDSP20132 328 aa29.72■■■□□ 2.35
NELFB-201ENST00000343053 G2E3Q7L622 706 aa29.72■■■□□ 2.35
NELFB-201ENST00000343053 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
NELFB-201ENST00000343053 DIP2BQ9P265 1576 aa29.72■■■□□ 2.35
NELFB-201ENST00000343053 AKAP12Q02952 1782 aa29.72■■■□□ 2.35
NELFB-201ENST00000343053 CHL1O00533 1208 aa29.72■■■□□ 2.35
NELFB-201ENST00000343053 TSHZ3Q63HK5 1081 aa29.72■■■□□ 2.35
NELFB-201ENST00000343053 RTL1A6NKG5 1358 aa29.71■■■□□ 2.35
NELFB-201ENST00000343053 RIMS1Q86UR5 1692 aaKnown RBP29.7■■■□□ 2.35
NELFB-201ENST00000343053 PKP1Q13835 747 aa29.7■■■□□ 2.34
NELFB-201ENST00000343053 NECTIN2Q92692 538 aa29.7■■■□□ 2.34
NELFB-201ENST00000343053 AGLP35573 1532 aa29.68■■■□□ 2.34
NELFB-201ENST00000343053 USP26Q9BXU7 913 aa29.68■■■□□ 2.34
NELFB-201ENST00000343053 SLC26A8Q96RN1 970 aa29.67■■■□□ 2.34
NELFB-201ENST00000343053 PEAK1Q9H792 1746 aa29.66■■■□□ 2.34
NELFB-201ENST00000343053 MAP3K19Q56UN5 1328 aa29.66■■■□□ 2.34
NELFB-201ENST00000343053 PPP6R1Q9UPN7 881 aa29.66■■■□□ 2.34
NELFB-201ENST00000343053 TSPYL4Q9UJ04 414 aa29.65■■■□□ 2.34
NELFB-201ENST00000343053 NRKQ7Z2Y5 1582 aa29.65■■■□□ 2.34
NELFB-201ENST00000343053 RPAP2Q8IXW5 612 aaPredicted RBP29.65■■■□□ 2.34
NELFB-201ENST00000343053 RABEP1Q15276 862 aa29.64■■■□□ 2.34
NELFB-201ENST00000343053 BAG4O95429 457 aaKnown RBP29.64■■■□□ 2.33
NELFB-201ENST00000343053 MTHFSDQ2M296 383 aaKnown RBP29.64■■■□□ 2.33
NELFB-201ENST00000343053 CHAMP1Q96JM3 812 aa29.64■■■□□ 2.33
NELFB-201ENST00000343053 MCTP1Q6DN14 999 aa29.63■■■□□ 2.33
NELFB-201ENST00000343053 EXOC6BQ9Y2D4 811 aa29.63■■■□□ 2.33
NELFB-201ENST00000343053 DDX49Q9Y6V7 483 aaKnown RBP29.63■■■□□ 2.33
NELFB-201ENST00000343053 ERBB4Q15303 1308 aa29.63■■■□□ 2.33
NELFB-201ENST00000343053 ZGPATQ8N5A5 531 aaKnown RBP29.63■■■□□ 2.33
NELFB-201ENST00000343053 NCLP19338 710 aaKnown RBP29.62■■■□□ 2.33
NELFB-201ENST00000343053 KIF24Q5T7B8 1368 aa29.62■■■□□ 2.33
NELFB-201ENST00000343053 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.61■■■□□ 2.33
NELFB-201ENST00000343053 OVOS2A0A0J9YW53 1432 aa29.61■■■□□ 2.33
NELFB-201ENST00000343053 OVOS2Q6IE36 1432 aa29.61■■■□□ 2.33
NELFB-201ENST00000343053 NAP1L5Q96NT1 182 aaPredicted RBP29.61■■■□□ 2.33
NELFB-201ENST00000343053 FOXD4L5Q5VV16 416 aaPredicted RBP29.6■■■□□ 2.33
NELFB-201ENST00000343053 FOXD4L4Q8WXT5 416 aaPredicted RBP29.6■■■□□ 2.33
NELFB-201ENST00000343053 RTF1Q92541 710 aaKnown RBP29.6■■■□□ 2.33
NELFB-201ENST00000343053 REREQ9P2R6 1566 aa29.59■■■□□ 2.33
NELFB-201ENST00000343053 UBE2Q2Q8WVN8 375 aa29.59■■■□□ 2.33
NELFB-201ENST00000343053 TECPR2O15040 1411 aa29.59■■■□□ 2.33
NELFB-201ENST00000343053 CRB1P82279 1406 aa29.59■■■□□ 2.33
NELFB-201ENST00000343053 PTPRCP08575 1304 aa29.59■■■□□ 2.33
NELFB-201ENST00000343053 LTKP29376 864 aa29.59■■■□□ 2.33
NELFB-201ENST00000343053 GOLGA6L22H0YM25 854 aa29.58■■■□□ 2.33
NELFB-201ENST00000343053 NUTM2GQ5VZR2 741 aa29.58■■■□□ 2.33
NELFB-201ENST00000343053 SKOR2Q2VWA4 1001 aaPredicted RBP29.58■■■□□ 2.33
NELFB-201ENST00000343053 USP6P35125 1406 aa29.58■■■□□ 2.33
NELFB-201ENST00000343053 TNRQ92752 1358 aa29.58■■■□□ 2.33
NELFB-201ENST00000343053 CASC1Q6TDU7 716 aa29.57■■■□□ 2.32
NELFB-201ENST00000343053 KIAA0232Q92628 1395 aa29.57■■■□□ 2.32
NELFB-201ENST00000343053 TMEM2Q9UHN6 1383 aa29.56■■■□□ 2.32
NELFB-201ENST00000343053 HDGFP51858 240 aaKnown RBP29.56■■■□□ 2.32
NELFB-201ENST00000343053 HAP1P54257 671 aaPredicted RBP29.56■■■□□ 2.32
NELFB-201ENST00000343053 NOL8Q76FK4 1167 aaKnown RBP29.56■■■□□ 2.32
NELFB-201ENST00000343053 TRIM44Q96DX7 344 aaPredicted RBP29.55■■■□□ 2.32
NELFB-201ENST00000343053 ADAMTS13Q76LX8 1427 aa29.54■■■□□ 2.32
NELFB-201ENST00000343053 CEBPAP49715 358 aaPredicted RBP29.54■■■□□ 2.32
NELFB-201ENST00000343053 CLCN1P35523 988 aa29.53■■■□□ 2.32
NELFB-201ENST00000343053 CAVIN1Q6NZI2 390 aaKnown RBP29.53■■■□□ 2.32
NELFB-201ENST00000343053 AMPHP49418 695 aa29.53■■■□□ 2.32
NELFB-201ENST00000343053 PDE1AP54750 535 aa29.52■■■□□ 2.32
NELFB-201ENST00000343053 ESPNB1AK53 854 aa29.52■■■□□ 2.32
NELFB-201ENST00000343053 HMMRO75330 724 aa29.51■■■□□ 2.32
NELFB-201ENST00000343053 FKBP5Q13451 457 aaPredicted RBP29.51■■■□□ 2.32
NELFB-201ENST00000343053 SIRT1Q96EB6 747 aa29.51■■■□□ 2.32
NELFB-201ENST00000343053 EYA1Q99502 592 aa29.51■■■□□ 2.32
NELFB-201ENST00000343053 NGDNQ8NEJ9 315 aaKnown RBP29.51■■■□□ 2.31
NELFB-201ENST00000343053 LTV1Q96GA3 475 aaPredicted RBP29.51■■■□□ 2.31
NELFB-201ENST00000343053 ST18O60284 1047 aa29.5■■■□□ 2.31
NELFB-201ENST00000343053 ERC2O15083 957 aa29.5■■■□□ 2.31
NELFB-201ENST00000343053 PNMA6EA0A0J9YXQ4 647 aa29.49■■■□□ 2.31
NELFB-201ENST00000343053 PLEKHG3A1L390 1219 aa29.49■■■□□ 2.31
NELFB-201ENST00000343053 CEP170BQ9Y4F5 1589 aaPredicted RBP29.49■■■□□ 2.31
NELFB-201ENST00000343053 RGPD1P0DJD0 1748 aa29.49■■■□□ 2.31
NELFB-201ENST00000343053 KLHL40Q2TBA0 621 aa29.49■■■□□ 2.31
NELFB-201ENST00000343053 REC8O95072 547 aa29.48■■■□□ 2.31
NELFB-201ENST00000343053 NASPP49321 788 aaPredicted RBP29.48■■■□□ 2.31
NELFB-201ENST00000343053 ISY1Q9ULR0 285 aaKnown RBP29.48■■■□□ 2.31
NELFB-201ENST00000343053 RILPL2Q969X0 211 aa29.48■■■□□ 2.31
NELFB-201ENST00000343053 STK31Q9BXU1 1019 aa29.48■■■□□ 2.31
NELFB-201ENST00000343053 RBM27Q9P2N5 1060 aaKnown RBP29.48■■■□□ 2.31
NELFB-201ENST00000343053 UBR1Q8IWV7 1749 aa29.47■■■□□ 2.31
NELFB-201ENST00000343053 GNAI2P04899 355 aa29.47■■■□□ 2.31
NELFB-201ENST00000343053 TRIM6-TRIM34B2RNG4 842 aa29.46■■■□□ 2.31
NELFB-201ENST00000343053 PRPF40AO75400 957 aaKnown RBP29.46■■■□□ 2.31
NELFB-201ENST00000343053 PTMSP20962 102 aa29.46■■■□□ 2.31
NELFB-201ENST00000343053 NEK4P51957 841 aa29.46■■■□□ 2.31
NELFB-201ENST00000343053 NUCB2P80303 420 aa29.46■■■□□ 2.31
NELFB-201ENST00000343053 TOPAZ1Q8N9V7 1692 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms