RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
SNRNP48-201ENST00000342415 SRCIN1Q9C0H9 1055 aa14.93□□□□□ -0.02
SNRNP48-201ENST00000342415 GAS2L3Q86XJ1 694 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 ZMYND15Q9H091 742 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 CASTP20810 708 aaKnown RBP14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 PSME1Q06323 249 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 NEXNQ0ZGT2 675 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 UBE2Q2Q8WVN8 375 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 TMX3Q96JJ7 454 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 USP19O94966 1318 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 FANCAO15360 1455 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 LARP1BQ659C4 914 aaKnown RBP14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 PLEKHM2Q8IWE5 1019 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 HDAC5Q9UQL6 1122 aa14.92□□□□□ -0.02
SNRNP48-201ENST00000342415 PLCH2O75038 1416 aa14.91□□□□□ -0.02
SNRNP48-201ENST00000342415 ANKRD36BQ8N2N9 1353 aa14.91□□□□□ -0.02
SNRNP48-201ENST00000342415 CD2BP2O95400 341 aaKnown RBP14.91□□□□□ -0.02
SNRNP48-201ENST00000342415 ZNF771Q7L3S4 317 aaPredicted RBP14.91□□□□□ -0.02
SNRNP48-201ENST00000342415 CCAR2Q8N163 923 aaKnown RBP14.91□□□□□ -0.02
SNRNP48-201ENST00000342415 SNX21Q969T3 373 aa14.91□□□□□ -0.02
SNRNP48-201ENST00000342415 A0A1W2PP64 1363 aa14.9□□□□□ -0.02
SNRNP48-201ENST00000342415 FOXO3O43524 673 aa14.9□□□□□ -0.02
SNRNP48-201ENST00000342415 RNF20Q5VTR2 975 aa14.9□□□□□ -0.02
SNRNP48-201ENST00000342415 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
SNRNP48-201ENST00000342415 PKP1Q13835 747 aa14.9□□□□□ -0.02
SNRNP48-201ENST00000342415 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
SNRNP48-201ENST00000342415 PRPF40BQ6NWY9 871 aaKnown RBP14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 TCEANC2Q96MN5 208 aa14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 KIF21AQ7Z4S6 1674 aa14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 ANTXR1Q9H6X2 564 aa14.89□□□□□ -0.03
SNRNP48-201ENST00000342415 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 DDX11Q96FC9 970 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 IL16Q14005 1332 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 WASLO00401 505 aaPredicted RBP14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 FLIIQ13045 1269 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 TAF7Q15545 349 aaPredicted RBP14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 AACSQ86V21 672 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 SDF4Q9BRK5 362 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 TFIP11Q9UBB9 837 aaKnown RBP14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 MYL6BP14649 208 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 RBM25P49756 843 aaKnown RBP14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 PDE1AP54750 535 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 CKAP2LQ8IYA6 745 aa14.88□□□□□ -0.03
SNRNP48-201ENST00000342415 FAM177BA6PVY3 158 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 ANKRD44Q8N8A2 993 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 PDRG1Q9NUG6 133 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 PLA2R1Q13018 1463 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 TPD52L1Q16890 204 aaPredicted RBP14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 RBSNQ9H1K0 784 aa14.87□□□□□ -0.03
SNRNP48-201ENST00000342415 WDR7Q9Y4E6 1490 aa14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 TTC12Q9H892 705 aaPredicted RBP14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 DCTPP1Q9H773 170 aa14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 APPP05067 770 aa14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 CBX1P83916 185 aa14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 FILIP1Q7Z7B0 1213 aa14.86□□□□□ -0.03
SNRNP48-201ENST00000342415 ABCC10Q5T3U5 1492 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 G2E3Q7L622 706 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 USP26Q9BXU7 913 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 TNMDQ9H2S6 317 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CD109Q6YHK3 1445 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 BOLA2Q9H3K6 86 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 NLRP2Q9NX02 1062 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CPLX1O14810 134 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CEP85Q6P2H3 762 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 ARHGAP45Q92619 1136 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CPA1P15085 419 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 ZNF530Q6P9A1 599 aaPredicted RBP14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 KIF3AQ9Y496 699 aa14.85□□□□□ -0.03
SNRNP48-201ENST00000342415 PTPRTO14522 1441 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 TTC5Q8N0Z6 440 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 TPM4P67936 248 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 KRT85P78386 507 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 NECAB1Q8N987 351 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 MAP7D2Q96T17 732 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 CNPY2Q9Y2B0 182 aa14.84□□□□□ -0.03
SNRNP48-201ENST00000342415 ADCY5O95622 1261 aa14.83□□□□□ -0.03
SNRNP48-201ENST00000342415 PPP1R42Q7Z4L9 355 aa14.83□□□□□ -0.03
SNRNP48-201ENST00000342415 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
SNRNP48-201ENST00000342415 JARID2Q92833 1246 aaPredicted RBP14.83□□□□□ -0.04
SNRNP48-201ENST00000342415 NSD2O96028 1365 aa14.83□□□□□ -0.04
SNRNP48-201ENST00000342415 GNAT3A8MTJ3 354 aa14.83□□□□□ -0.04
SNRNP48-201ENST00000342415 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.04
SNRNP48-201ENST00000342415 WASHC4Q2M389 1173 aa14.83□□□□□ -0.04
SNRNP48-201ENST00000342415 LRSAM1Q6UWE0 723 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms