RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 PEAK1Q9H792 1746 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 CDC45O75419 566 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 HSP90AA1P07900 732 aaKnown RBP9.05□□□□□ -0.96
PTPRR-202ENST00000342084 GAS2L2Q8NHY3 880 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 ESF1Q9H501 851 aaKnown RBP9.05□□□□□ -0.96
PTPRR-202ENST00000342084 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 NRKQ7Z2Y5 1582 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 ACEP12821 1306 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTPRR-202ENST00000342084 MEIS3Q99687 375 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 UBR1Q8IWV7 1749 aa9.05□□□□□ -0.96
PTPRR-202ENST00000342084 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.04□□□□□ -0.96
PTPRR-202ENST00000342084 TECPR2O15040 1411 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 K7ELQ4 463 aaPredicted RBP9.04□□□□□ -0.96
PTPRR-202ENST00000342084 SSFA2P28290 1259 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 CHMP4BQ9H444 224 aaKnown RBP9.04□□□□□ -0.96
PTPRR-202ENST00000342084 DDX11L8A8MPP1 907 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 F6X3S4 739 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 G2E3Q7L622 706 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 SLC26A8Q96RN1 970 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
PTPRR-202ENST00000342084 OVOS2A0A0J9YW53 1432 aa9.03□□□□□ -0.96
PTPRR-202ENST00000342084 OVOS2Q6IE36 1432 aa9.03□□□□□ -0.96
PTPRR-202ENST00000342084 CHL1O00533 1208 aa9.03□□□□□ -0.96
PTPRR-202ENST00000342084 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
PTPRR-202ENST00000342084 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
PTPRR-202ENST00000342084 ANKRD44Q8N8A2 993 aa9.03□□□□□ -0.96
PTPRR-202ENST00000342084 TNRQ92752 1358 aa9.03□□□□□ -0.96
PTPRR-202ENST00000342084 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 LTKP29376 864 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 TSHZ3Q63HK5 1081 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 SLC4A10Q6U841 1118 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 GAS2L3Q86XJ1 694 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 MAP3K19Q56UN5 1328 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 RTL1A6NKG5 1358 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 ADAMTS13Q76LX8 1427 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 EIF5BO60841 1220 aaKnown RBP9.02□□□□□ -0.97
PTPRR-202ENST00000342084 SDSP20132 328 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
PTPRR-202ENST00000342084 TMEM2Q9UHN6 1383 aa9.01□□□□□ -0.97
PTPRR-202ENST00000342084 USP6P35125 1406 aa9.01□□□□□ -0.97
PTPRR-202ENST00000342084 CRB1P82279 1406 aa9.01□□□□□ -0.97
PTPRR-202ENST00000342084 CEBPAP49715 358 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-202ENST00000342084 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
PTPRR-202ENST00000342084 GRPEL1Q9HAV7 217 aa9.01□□□□□ -0.97
PTPRR-202ENST00000342084 SIRT1Q96EB6 747 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 GBP4Q96PP9 640 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 TSPYL4Q9UJ04 414 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 KIF24Q5T7B8 1368 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 PTPRUQ92729 1446 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 TOPAZ1Q8N9V7 1692 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 PKP1Q13835 747 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 USP26Q9BXU7 913 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
PTPRR-202ENST00000342084 RGPD1P0DJD0 1748 aa9□□□□□ -0.97
PTPRR-202ENST00000342084 AK9Q5TCS8 1911 aa8.99□□□□□ -0.97
PTPRR-202ENST00000342084 CHAMP1Q96JM3 812 aa8.99□□□□□ -0.97
PTPRR-202ENST00000342084 CEP170BQ9Y4F5 1589 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-202ENST00000342084 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
PTPRR-202ENST00000342084 MRE11P49959 708 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 RPAP2Q8IXW5 612 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-202ENST00000342084 EXOC6BQ9Y2D4 811 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 NALCNQ8IZF0 1738 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 PTPRCP08575 1304 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 PLEKHG3A1L390 1219 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 HDGFP51858 240 aaKnown RBP8.98□□□□□ -0.97
PTPRR-202ENST00000342084 POTEDQ86YR6 584 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
PTPRR-202ENST00000342084 ZGPATQ8N5A5 531 aaKnown RBP8.98□□□□□ -0.97
PTPRR-202ENST00000342084 RTF1Q92541 710 aaKnown RBP8.98□□□□□ -0.97
PTPRR-202ENST00000342084 BAG4O95429 457 aaKnown RBP8.97□□□□□ -0.97
PTPRR-202ENST00000342084 RABEP1Q15276 862 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 MCTP1Q6DN14 999 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 EYA1Q99502 592 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 ARHGEF10O15013 1369 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 USP31Q70CQ4 1352 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 PLEKHG1Q9ULL1 1385 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 ERBB4Q15303 1308 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 AMPHP49418 695 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 FOXD4L5Q5VV16 416 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-202ENST00000342084 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
PTPRR-202ENST00000342084 FOXD4L4Q8WXT5 416 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-202ENST00000342084 LTV1Q96GA3 475 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-202ENST00000342084 AMOTL2Q9Y2J4 779 aa8.97□□□□□ -0.97
PTPRR-202ENST00000342084 ARHGAP23Q9P227 1491 aa8.96□□□□□ -0.97
PTPRR-202ENST00000342084 FMN2Q9NZ56 1722 aa8.96□□□□□ -0.97
PTPRR-202ENST00000342084 SSH2Q76I76 1423 aa8.96□□□□□ -0.97
PTPRR-202ENST00000342084 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
PTPRR-202ENST00000342084 USHBP1Q8N6Y0 703 aa8.96□□□□□ -0.98
PTPRR-202ENST00000342084 SLIT1O75093 1534 aa8.96□□□□□ -0.98
PTPRR-202ENST00000342084 RGPD8O14715 1765 aaPredicted RBP8.95□□□□□ -0.98
PTPRR-202ENST00000342084 PDE1AP54750 535 aa8.95□□□□□ -0.98
PTPRR-202ENST00000342084 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
PTPRR-202ENST00000342084 FLT4P35916 1363 aa8.95□□□□□ -0.98
PTPRR-202ENST00000342084 NCLP19338 710 aaKnown RBP8.95□□□□□ -0.98
PTPRR-202ENST00000342084 FKBP5Q13451 457 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms