RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
SH2B3-201ENST00000341259 CCDC39Q9UFE4 941 aa23.02■■□□□ 1.28
SH2B3-201ENST00000341259 TNRQ92752 1358 aa23.02■■□□□ 1.28
SH2B3-201ENST00000341259 CEP89Q96ST8 783 aa23.02■■□□□ 1.28
SH2B3-201ENST00000341259 MTMR7Q9Y216 660 aa23.02■■□□□ 1.28
SH2B3-201ENST00000341259 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.28
SH2B3-201ENST00000341259 MX1P20591 662 aa23.02■■□□□ 1.28
SH2B3-201ENST00000341259 FAM43AQ8N2R8 423 aa23.02■■□□□ 1.28
SH2B3-201ENST00000341259 WDR33Q9C0J8 1336 aaKnown RBP23.02■■□□□ 1.27
SH2B3-201ENST00000341259 A0A0U1RQG5 324 aaPredicted RBP23.01■■□□□ 1.27
SH2B3-201ENST00000341259 HSP90AA2PQ14568 343 aaPredicted RBP23.01■■□□□ 1.27
SH2B3-201ENST00000341259 F6X3S4 739 aa23.01■■□□□ 1.27
SH2B3-201ENST00000341259 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.01■■□□□ 1.27
SH2B3-201ENST00000341259 ACEP12821 1306 aa23.01■■□□□ 1.27
SH2B3-201ENST00000341259 RAB11FIP3O75154 756 aa23.01■■□□□ 1.27
SH2B3-201ENST00000341259 OLFM4Q6UX06 510 aa23.01■■□□□ 1.27
SH2B3-201ENST00000341259 KIF1BPQ96EK5 621 aa23.01■■□□□ 1.27
SH2B3-201ENST00000341259 ZNF396Q96N95 335 aaPredicted RBP23.01■■□□□ 1.27
SH2B3-201ENST00000341259 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
SH2B3-201ENST00000341259 PDE4CQ08493 712 aa23■■□□□ 1.27
SH2B3-201ENST00000341259 PDRG1Q9NUG6 133 aa23■■□□□ 1.27
SH2B3-201ENST00000341259 FKBP4Q02790 459 aaKnown RBP eCLIP23■■□□□ 1.27
SH2B3-201ENST00000341259 HOMER1Q86YM7 354 aa23■■□□□ 1.27
SH2B3-201ENST00000341259 FOXO3O43524 673 aa23■■□□□ 1.27
SH2B3-201ENST00000341259 PARD3Q8TEW0 1356 aa22.99■■□□□ 1.27
SH2B3-201ENST00000341259 IL16Q14005 1332 aa22.99■■□□□ 1.27
SH2B3-201ENST00000341259 IPO7O95373 1038 aaKnown RBP22.99■■□□□ 1.27
SH2B3-201ENST00000341259 SLC3A2P08195 630 aaKnown RBP22.99■■□□□ 1.27
SH2B3-201ENST00000341259 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
SH2B3-201ENST00000341259 JAKMIP1Q96N16 626 aaKnown RBP22.99■■□□□ 1.27
SH2B3-201ENST00000341259 CEP126Q9P2H0 1117 aa22.99■■□□□ 1.27
SH2B3-201ENST00000341259 KINO60870 393 aaKnown RBP22.99■■□□□ 1.27
SH2B3-201ENST00000341259 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
SH2B3-201ENST00000341259 MPHOSPH8Q99549 860 aa22.99■■□□□ 1.27
SH2B3-201ENST00000341259 MBIPQ9NS73 344 aa22.99■■□□□ 1.27
SH2B3-201ENST00000341259 CIZ1Q9ULV3 898 aaPredicted RBP22.99■■□□□ 1.27
SH2B3-201ENST00000341259 ZSCAN25Q6NSZ9 544 aa22.98■■□□□ 1.27
SH2B3-201ENST00000341259 BLOC1S2Q6QNY1 142 aa22.98■■□□□ 1.27
SH2B3-201ENST00000341259 PTPRCP08575 1304 aa22.98■■□□□ 1.27
SH2B3-201ENST00000341259 DNMT1P26358 1616 aaKnown RBP22.98■■□□□ 1.27
SH2B3-201ENST00000341259 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
SH2B3-201ENST00000341259 LARP1Q6PKG0 1096 aaKnown RBP22.98■■□□□ 1.27
SH2B3-201ENST00000341259 FAM83GA6ND36 823 aa22.96■■□□□ 1.27
SH2B3-201ENST00000341259 NACAP1Q9BZK3 213 aa22.96■■□□□ 1.27
SH2B3-201ENST00000341259 STK38Q15208 465 aa22.96■■□□□ 1.27
SH2B3-201ENST00000341259 ATP2B1P20020 1258 aa22.95■■□□□ 1.27
SH2B3-201ENST00000341259 ZSCAN31Q96LW9 406 aaPredicted RBP22.95■■□□□ 1.27
SH2B3-201ENST00000341259 MYD88Q99836 296 aa22.95■■□□□ 1.27
SH2B3-201ENST00000341259 FBLN1P23142 703 aa22.95■■□□□ 1.26
SH2B3-201ENST00000341259 LARP1BQ659C4 914 aaKnown RBP22.95■■□□□ 1.26
SH2B3-201ENST00000341259 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
SH2B3-201ENST00000341259 DISP1Q96F81 1524 aa22.94■■□□□ 1.26
SH2B3-201ENST00000341259 STARD3NLO95772 234 aa22.94■■□□□ 1.26
SH2B3-201ENST00000341259 LRRFIP2Q9Y608 721 aaKnown RBP22.94■■□□□ 1.26
SH2B3-201ENST00000341259 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
SH2B3-201ENST00000341259 GLRX3O76003 335 aaKnown RBP22.94■■□□□ 1.26
SH2B3-201ENST00000341259 ARHGEF12Q9NZN5 1544 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
SH2B3-201ENST00000341259 FLIIQ13045 1269 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 SAMD1Q6SPF0 538 aaPredicted RBP22.93■■□□□ 1.26
SH2B3-201ENST00000341259 PTCD1O75127 700 aaKnown RBP22.93■■□□□ 1.26
SH2B3-201ENST00000341259 TESK2Q96S53 571 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 PZPP20742 1482 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 ABCC10Q5T3U5 1492 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 MCM4P33991 863 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 TRIM5Q9C035 493 aa22.93■■□□□ 1.26
SH2B3-201ENST00000341259 STK11IPQ8N1F8 1099 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 KRT32Q14532 448 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 CCDC70Q6NSX1 233 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 UHRF1BP1LA0JNW5 1464 aa22.92■■□□□ 1.26
SH2B3-201ENST00000341259 IGHDP01880 384 aa22.91■■□□□ 1.26
SH2B3-201ENST00000341259 CTNNA3Q9UI47 895 aa22.91■■□□□ 1.26
SH2B3-201ENST00000341259 CASTP20810 708 aaKnown RBP22.91■■□□□ 1.26
SH2B3-201ENST00000341259 KRT85P78386 507 aa22.91■■□□□ 1.26
SH2B3-201ENST00000341259 CCDC173Q0VFZ6 552 aa22.91■■□□□ 1.26
SH2B3-201ENST00000341259 DBF4Q9UBU7 674 aaPredicted RBP22.91■■□□□ 1.26
SH2B3-201ENST00000341259 CCDC69A6NI79 296 aa22.9■■□□□ 1.26
SH2B3-201ENST00000341259 KRT28Q7Z3Y7 464 aa22.9■■□□□ 1.26
SH2B3-201ENST00000341259 BRPF3Q9ULD4 1205 aa22.9■■□□□ 1.26
SH2B3-201ENST00000341259 HYPKQ9NX55 129 aa22.9■■□□□ 1.26
SH2B3-201ENST00000341259 TRIM22Q8IYM9 498 aa22.88■■□□□ 1.25
SH2B3-201ENST00000341259 CCDC43Q96MW1 224 aaKnown RBP22.88■■□□□ 1.25
SH2B3-201ENST00000341259 SPINK5Q9NQ38 1064 aaPredicted RBP22.88■■□□□ 1.25
SH2B3-201ENST00000341259 POLR3AO14802 1390 aaPredicted RBP22.88■■□□□ 1.25
SH2B3-201ENST00000341259 ABCC2Q92887 1545 aa22.88■■□□□ 1.25
SH2B3-201ENST00000341259 KLHL34Q8N239 644 aa22.87■■□□□ 1.25
SH2B3-201ENST00000341259 PDILTQ8N807 584 aa22.87■■□□□ 1.25
SH2B3-201ENST00000341259 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
SH2B3-201ENST00000341259 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
SH2B3-201ENST00000341259 JMYQ8N9B5 988 aa22.87■■□□□ 1.25
SH2B3-201ENST00000341259 FAM13BQ9NYF5 915 aa22.87■■□□□ 1.25
SH2B3-201ENST00000341259 TTC21AQ8NDW8 1320 aa22.86■■□□□ 1.25
SH2B3-201ENST00000341259 SMC2O95347 1197 aa22.86■■□□□ 1.25
SH2B3-201ENST00000341259 IKQ13123 557 aaPredicted RBP22.86■■□□□ 1.25
SH2B3-201ENST00000341259 BOLA2Q9H3K6 86 aa22.86■■□□□ 1.25
SH2B3-201ENST00000341259 PRPF40BQ6NWY9 871 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms