RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 C8orf58Q8NAV2 365 aa25.49■■□□□ 1.67
CLPB-202ENST00000340729 TNRQ92752 1358 aa25.49■■□□□ 1.67
CLPB-202ENST00000340729 RPAP2Q8IXW5 612 aaPredicted RBP25.49■■□□□ 1.67
CLPB-202ENST00000340729 LMBRD1Q9NUN5 540 aa25.49■■□□□ 1.67
CLPB-202ENST00000340729 HAP1P54257 671 aaPredicted RBP25.48■■□□□ 1.67
CLPB-202ENST00000340729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.47■■□□□ 1.67
CLPB-202ENST00000340729 OFD1O75665 1012 aa25.46■■□□□ 1.67
CLPB-202ENST00000340729 ELL2O00472 640 aaPredicted RBP25.46■■□□□ 1.67
CLPB-202ENST00000340729 CASC1Q6TDU7 716 aa25.46■■□□□ 1.67
CLPB-202ENST00000340729 RGS12O14924 1447 aa25.45■■□□□ 1.67
CLPB-202ENST00000340729 AK9Q5TCS8 1911 aa25.45■■□□□ 1.67
CLPB-202ENST00000340729 ST18O60284 1047 aa25.45■■□□□ 1.66
CLPB-202ENST00000340729 MCTP1Q6DN14 999 aa25.45■■□□□ 1.66
CLPB-202ENST00000340729 ZSCAN23Q3MJ62 389 aa25.44■■□□□ 1.66
CLPB-202ENST00000340729 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
CLPB-202ENST00000340729 PDLIM2Q96JY6 352 aa25.44■■□□□ 1.66
CLPB-202ENST00000340729 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.43■■□□□ 1.66
CLPB-202ENST00000340729 C3P01024 1663 aa25.43■■□□□ 1.66
CLPB-202ENST00000340729 FBLN1P23142 703 aa25.43■■□□□ 1.66
CLPB-202ENST00000340729 MSNP26038 577 aaKnown RBP25.42■■□□□ 1.66
CLPB-202ENST00000340729 METP08581 1390 aa25.42■■□□□ 1.66
CLPB-202ENST00000340729 FER1L4A9Z1Z3 1794 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 REC8O95072 547 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 NRKQ7Z2Y5 1582 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 MON2Q7Z3U7 1717 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 SDSP20132 328 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 CAVIN1Q6NZI2 390 aaKnown RBP25.41■■□□□ 1.66
CLPB-202ENST00000340729 CEP85Q6P2H3 762 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 WAPLQ7Z5K2 1190 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 KIAA0232Q92628 1395 aa25.41■■□□□ 1.66
CLPB-202ENST00000340729 KIAA1211Q6ZU35 1233 aa25.4■■□□□ 1.66
CLPB-202ENST00000340729 PTPRCP08575 1304 aa25.39■■□□□ 1.65
CLPB-202ENST00000340729 RTL1A6NKG5 1358 aa25.39■■□□□ 1.65
CLPB-202ENST00000340729 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
CLPB-202ENST00000340729 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.38■■□□□ 1.65
CLPB-202ENST00000340729 NOL7Q9UMY1 257 aaKnown RBP25.38■■□□□ 1.65
CLPB-202ENST00000340729 ZNF500O60304 480 aaPredicted RBP25.38■■□□□ 1.65
CLPB-202ENST00000340729 PDCL3Q9H2J4 239 aa25.37■■□□□ 1.65
CLPB-202ENST00000340729 OSBPL3Q9H4L5 887 aa25.37■■□□□ 1.65
CLPB-202ENST00000340729 TMEM2Q9UHN6 1383 aa25.37■■□□□ 1.65
CLPB-202ENST00000340729 PKP1Q13835 747 aa25.36■■□□□ 1.65
CLPB-202ENST00000340729 RBSNQ9H1K0 784 aa25.36■■□□□ 1.65
CLPB-202ENST00000340729 ZDHHC9Q9Y397 364 aa25.36■■□□□ 1.65
CLPB-202ENST00000340729 CPS1P31327 1500 aa25.35■■□□□ 1.65
CLPB-202ENST00000340729 ERC2O15083 957 aa25.35■■□□□ 1.65
CLPB-202ENST00000340729 NME9Q86XW9 330 aa25.35■■□□□ 1.65
CLPB-202ENST00000340729 OTUD7AQ8TE49 926 aaPredicted RBP25.35■■□□□ 1.65
CLPB-202ENST00000340729 FAM83GA6ND36 823 aa25.34■■□□□ 1.65
CLPB-202ENST00000340729 MCM5P33992 734 aa25.34■■□□□ 1.65
CLPB-202ENST00000340729 CEBPAP49715 358 aaPredicted RBP25.34■■□□□ 1.65
CLPB-202ENST00000340729 GPT2Q8TD30 523 aa25.34■■□□□ 1.65
CLPB-202ENST00000340729 MSH6P52701 1360 aa25.34■■□□□ 1.65
CLPB-202ENST00000340729 AKAP12Q02952 1782 aa25.33■■□□□ 1.65
CLPB-202ENST00000340729 CHL1O00533 1208 aa25.33■■□□□ 1.65
CLPB-202ENST00000340729 COG3Q96JB2 828 aa25.33■■□□□ 1.65
CLPB-202ENST00000340729 NCLP19338 710 aaKnown RBP25.33■■□□□ 1.65
CLPB-202ENST00000340729 WASLO00401 505 aaPredicted RBP25.32■■□□□ 1.64
CLPB-202ENST00000340729 PRIM1P49642 420 aaKnown RBP25.32■■□□□ 1.64
CLPB-202ENST00000340729 MCM2P49736 904 aa25.32■■□□□ 1.64
CLPB-202ENST00000340729 LRSAM1Q6UWE0 723 aa25.32■■□□□ 1.64
CLPB-202ENST00000340729 ZGPATQ8N5A5 531 aaKnown RBP25.32■■□□□ 1.64
CLPB-202ENST00000340729 PRPF40AO75400 957 aaKnown RBP25.32■■□□□ 1.64
CLPB-202ENST00000340729 TECPR2O15040 1411 aa25.31■■□□□ 1.64
CLPB-202ENST00000340729 HMMRO75330 724 aa25.3■■□□□ 1.64
CLPB-202ENST00000340729 MBD3O95983 291 aa25.3■■□□□ 1.64
CLPB-202ENST00000340729 ADAMTS13Q76LX8 1427 aa25.3■■□□□ 1.64
CLPB-202ENST00000340729 TXNDC2Q86VQ3 553 aa25.29■■□□□ 1.64
CLPB-202ENST00000340729 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
CLPB-202ENST00000340729 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.28■■□□□ 1.64
CLPB-202ENST00000340729 TUBGCP6Q96RT7 1819 aa25.28■■□□□ 1.64
CLPB-202ENST00000340729 ITSN1Q15811 1721 aa25.28■■□□□ 1.64
CLPB-202ENST00000340729 VSIG10Q8N0Z9 540 aa25.27■■□□□ 1.64
CLPB-202ENST00000340729 ZKSCAN5Q9Y2L8 839 aa25.27■■□□□ 1.64
CLPB-202ENST00000340729 SMARCA5O60264 1052 aaPredicted RBP25.27■■□□□ 1.64
CLPB-202ENST00000340729 IL17RAQ96F46 866 aa25.27■■□□□ 1.64
CLPB-202ENST00000340729 MEIS3Q99687 375 aa25.27■■□□□ 1.64
CLPB-202ENST00000340729 TMEM63CQ9P1W3 806 aa25.27■■□□□ 1.64
CLPB-202ENST00000340729 HDGFP51858 240 aaKnown RBP25.26■■□□□ 1.63
CLPB-202ENST00000340729 CUL4AQ13619 759 aa25.26■■□□□ 1.63
CLPB-202ENST00000340729 ZRANB1Q9UGI0 708 aa25.26■■□□□ 1.63
CLPB-202ENST00000340729 CSPP1Q1MSJ5 1256 aa25.25■■□□□ 1.63
CLPB-202ENST00000340729 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
CLPB-202ENST00000340729 LTKP29376 864 aa25.25■■□□□ 1.63
CLPB-202ENST00000340729 PDE1AP54750 535 aa25.25■■□□□ 1.63
CLPB-202ENST00000340729 RRS1Q15050 365 aaKnown RBP25.25■■□□□ 1.63
CLPB-202ENST00000340729 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
CLPB-202ENST00000340729 BRD1O95696 1058 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 INTS4Q96HW7 963 aaKnown RBP25.24■■□□□ 1.63
CLPB-202ENST00000340729 MAP7D2Q96T17 732 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 RBM27Q9P2N5 1060 aaKnown RBP25.24■■□□□ 1.63
CLPB-202ENST00000340729 RGPD1P0DJD0 1748 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 ANAPC15P60006 121 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 CCDC39Q9UFE4 941 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 CCDC61Q9Y6R9 512 aa25.24■■□□□ 1.63
CLPB-202ENST00000340729 NUDT16Q96DE0 195 aaKnown RBP25.23■■□□□ 1.63
CLPB-202ENST00000340729 TMX3Q96JJ7 454 aa25.23■■□□□ 1.63
CLPB-202ENST00000340729 SSH2Q76I76 1423 aa25.23■■□□□ 1.63
CLPB-202ENST00000340729 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
CLPB-202ENST00000340729 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms