RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 FOXD4L3Q6VB84 417 aaPredicted RBP20.37■□□□□ 0.85
TRIM9-202ENST00000338969 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
TRIM9-202ENST00000338969 CPS1P31327 1500 aa20.37■□□□□ 0.85
TRIM9-202ENST00000338969 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
TRIM9-202ENST00000338969 NAP1L5Q96NT1 182 aaPredicted RBP20.36■□□□□ 0.85
TRIM9-202ENST00000338969 MAP2P11137 1827 aaKnown RBP20.35■□□□□ 0.85
TRIM9-202ENST00000338969 MSH6P52701 1360 aa20.35■□□□□ 0.85
TRIM9-202ENST00000338969 SDSP20132 328 aa20.34■□□□□ 0.85
TRIM9-202ENST00000338969 GAS2L3Q86XJ1 694 aa20.34■□□□□ 0.85
TRIM9-202ENST00000338969 USHBP1Q8N6Y0 703 aa20.34■□□□□ 0.85
TRIM9-202ENST00000338969 GRPEL1Q9HAV7 217 aa20.34■□□□□ 0.85
TRIM9-202ENST00000338969 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
TRIM9-202ENST00000338969 CEP85Q6P2H3 762 aa20.34■□□□□ 0.85
TRIM9-202ENST00000338969 DDX49Q9Y6V7 483 aaKnown RBP20.34■□□□□ 0.85
TRIM9-202ENST00000338969 TTC22Q5TAA0 569 aa20.33■□□□□ 0.85
TRIM9-202ENST00000338969 PKP1Q13835 747 aa20.33■□□□□ 0.85
TRIM9-202ENST00000338969 DCTPP1Q9H773 170 aa20.33■□□□□ 0.85
TRIM9-202ENST00000338969 DIP2BQ9P265 1576 aa20.33■□□□□ 0.84
TRIM9-202ENST00000338969 SNX21Q969T3 373 aa20.33■□□□□ 0.84
TRIM9-202ENST00000338969 MED14O60244 1454 aa20.33■□□□□ 0.84
TRIM9-202ENST00000338969 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
TRIM9-202ENST00000338969 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
TRIM9-202ENST00000338969 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
TRIM9-202ENST00000338969 TMEM2Q9UHN6 1383 aa20.32■□□□□ 0.84
TRIM9-202ENST00000338969 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
TRIM9-202ENST00000338969 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
TRIM9-202ENST00000338969 TRIM6-TRIM34B2RNG4 842 aa20.31■□□□□ 0.84
TRIM9-202ENST00000338969 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
TRIM9-202ENST00000338969 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
TRIM9-202ENST00000338969 ATP7BP35670 1465 aa20.3■□□□□ 0.84
TRIM9-202ENST00000338969 MAP3K19Q56UN5 1328 aa20.3■□□□□ 0.84
TRIM9-202ENST00000338969 GOLGA6L22H0YM25 854 aa20.3■□□□□ 0.84
TRIM9-202ENST00000338969 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
TRIM9-202ENST00000338969 ABTB2Q8N961 1025 aa20.3■□□□□ 0.84
TRIM9-202ENST00000338969 BRPF1P55201 1214 aaPredicted RBP20.29■□□□□ 0.84
TRIM9-202ENST00000338969 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
TRIM9-202ENST00000338969 CHL1O00533 1208 aa20.29■□□□□ 0.84
TRIM9-202ENST00000338969 MRE11P49959 708 aa20.29■□□□□ 0.84
TRIM9-202ENST00000338969 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
TRIM9-202ENST00000338969 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
TRIM9-202ENST00000338969 FSD2A1L4K1 749 aa20.29■□□□□ 0.84
TRIM9-202ENST00000338969 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
TRIM9-202ENST00000338969 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
TRIM9-202ENST00000338969 MAP4K4O95819 1239 aaPredicted RBP20.28■□□□□ 0.84
TRIM9-202ENST00000338969 KCNA6P17658 529 aa20.27■□□□□ 0.84
TRIM9-202ENST00000338969 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
TRIM9-202ENST00000338969 DTNBO60941 627 aa20.27■□□□□ 0.83
TRIM9-202ENST00000338969 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.83
TRIM9-202ENST00000338969 CAVIN1Q6NZI2 390 aaKnown RBP20.26■□□□□ 0.83
TRIM9-202ENST00000338969 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
TRIM9-202ENST00000338969 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
TRIM9-202ENST00000338969 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
TRIM9-202ENST00000338969 BAG4O95429 457 aaKnown RBP20.25■□□□□ 0.83
TRIM9-202ENST00000338969 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
TRIM9-202ENST00000338969 EYA1Q99502 592 aa20.24■□□□□ 0.83
TRIM9-202ENST00000338969 RTL1A6NKG5 1358 aa20.24■□□□□ 0.83
TRIM9-202ENST00000338969 RABEP1Q15276 862 aa20.24■□□□□ 0.83
TRIM9-202ENST00000338969 HMMRO75330 724 aa20.24■□□□□ 0.83
TRIM9-202ENST00000338969 NEK4P51957 841 aa20.24■□□□□ 0.83
TRIM9-202ENST00000338969 ANO2Q9NQ90 1003 aa20.24■□□□□ 0.83
TRIM9-202ENST00000338969 CIZ1Q9ULV3 898 aaPredicted RBP20.24■□□□□ 0.83
TRIM9-202ENST00000338969 DDIT3P35638 169 aa20.23■□□□□ 0.83
TRIM9-202ENST00000338969 PIK3R4Q99570 1358 aa20.23■□□□□ 0.83
TRIM9-202ENST00000338969 PRPF40AO75400 957 aaKnown RBP20.23■□□□□ 0.83
TRIM9-202ENST00000338969 RBM27Q9P2N5 1060 aaKnown RBP20.23■□□□□ 0.83
TRIM9-202ENST00000338969 ANXA1P04083 346 aa20.22■□□□□ 0.83
TRIM9-202ENST00000338969 AK9Q5TCS8 1911 aa20.22■□□□□ 0.83
TRIM9-202ENST00000338969 AATKQ6ZMQ8 1374 aa20.22■□□□□ 0.83
TRIM9-202ENST00000338969 THEMISQ8N1K5 641 aaPredicted RBP20.22■□□□□ 0.83
TRIM9-202ENST00000338969 PNMA6EA0A0J9YXQ4 647 aa20.21■□□□□ 0.83
TRIM9-202ENST00000338969 UPF3BQ9BZI7 483 aaKnown RBP20.21■□□□□ 0.83
TRIM9-202ENST00000338969 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
TRIM9-202ENST00000338969 LARP6Q9BRS8 491 aaKnown RBP20.21■□□□□ 0.83
TRIM9-202ENST00000338969 ST18O60284 1047 aa20.2■□□□□ 0.82
TRIM9-202ENST00000338969 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
TRIM9-202ENST00000338969 GNAI2P04899 355 aa20.2■□□□□ 0.82
TRIM9-202ENST00000338969 PDE1AP54750 535 aa20.2■□□□□ 0.82
TRIM9-202ENST00000338969 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
TRIM9-202ENST00000338969 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
TRIM9-202ENST00000338969 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
TRIM9-202ENST00000338969 FLIIQ13045 1269 aa20.19■□□□□ 0.82
TRIM9-202ENST00000338969 ERC2O15083 957 aa20.18■□□□□ 0.82
TRIM9-202ENST00000338969 REC8O95072 547 aa20.18■□□□□ 0.82
TRIM9-202ENST00000338969 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
TRIM9-202ENST00000338969 ERBB4Q15303 1308 aa20.17■□□□□ 0.82
TRIM9-202ENST00000338969 NASPP49321 788 aaPredicted RBP20.16■□□□□ 0.82
TRIM9-202ENST00000338969 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
TRIM9-202ENST00000338969 SPATA31D1Q6ZQQ2 1576 aa20.16■□□□□ 0.82
TRIM9-202ENST00000338969 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
TRIM9-202ENST00000338969 PSME1Q06323 249 aa20.16■□□□□ 0.82
TRIM9-202ENST00000338969 SKOR2Q2VWA4 1001 aaPredicted RBP20.16■□□□□ 0.82
TRIM9-202ENST00000338969 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
TRIM9-202ENST00000338969 PTPRCP08575 1304 aa20.16■□□□□ 0.82
TRIM9-202ENST00000338969 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
TRIM9-202ENST00000338969 PALD1Q9ULE6 856 aa20.15■□□□□ 0.82
TRIM9-202ENST00000338969 ESPNB1AK53 854 aa20.15■□□□□ 0.82
TRIM9-202ENST00000338969 RNF214Q8ND24 703 aa20.15■□□□□ 0.82
TRIM9-202ENST00000338969 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
TRIM9-202ENST00000338969 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.82
TRIM9-202ENST00000338969 UNC5CLQ8IV45 518 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms