RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 STAC3Q96MF2 364 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 USP19O94966 1318 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 ZNF445P59923 1031 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 GPATCH8Q9UKJ3 1502 aaKnown RBP15.72■□□□□ 0.11
COL2A1-201ENST00000337299 RBM25P49756 843 aaKnown RBP15.72■□□□□ 0.11
COL2A1-201ENST00000337299 TMX1Q9H3N1 280 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 ATP10BO94823 1461 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 URI1O94763 535 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-201ENST00000337299 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-201ENST00000337299 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-201ENST00000337299 DMTNQ08495 405 aa15.71■□□□□ 0.11
COL2A1-201ENST00000337299 CEP135Q66GS9 1140 aa15.71■□□□□ 0.11
COL2A1-201ENST00000337299 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
COL2A1-201ENST00000337299 LMBRD1Q9NUN5 540 aa15.71■□□□□ 0.11
COL2A1-201ENST00000337299 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
COL2A1-201ENST00000337299 CWC27Q6UX04 472 aaKnown RBP15.71■□□□□ 0.1
COL2A1-201ENST00000337299 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.1
COL2A1-201ENST00000337299 DEF6Q9H4E7 631 aa15.71■□□□□ 0.1
COL2A1-201ENST00000337299 IPO4Q8TEX9 1081 aaKnown RBP15.7■□□□□ 0.1
COL2A1-201ENST00000337299 JAKMIP1Q96N16 626 aaKnown RBP15.7■□□□□ 0.1
COL2A1-201ENST00000337299 NUP153P49790 1475 aaKnown RBP15.7■□□□□ 0.1
COL2A1-201ENST00000337299 PAXIP1Q6ZW49 1069 aaPredicted RBP15.7■□□□□ 0.1
COL2A1-201ENST00000337299 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
COL2A1-201ENST00000337299 TOMM22Q9NS69 142 aa15.7■□□□□ 0.1
COL2A1-201ENST00000337299 PDCP20941 246 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 SDSP20132 328 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
COL2A1-201ENST00000337299 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 RNF20Q5VTR2 975 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 GTF3C6Q969F1 213 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 OGFRQ9NZT2 677 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 PIBF1Q8WXW3 757 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 ADGRF5Q8IZF2 1346 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 NSD3Q9BZ95 1437 aa15.69■□□□□ 0.1
COL2A1-201ENST00000337299 CCDC141Q6ZP82 1450 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 CASTP20810 708 aaKnown RBP15.68■□□□□ 0.1
COL2A1-201ENST00000337299 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 DCTN1Q14203 1278 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 CD2BP2O95400 341 aaKnown RBP15.68■□□□□ 0.1
COL2A1-201ENST00000337299 ME1P48163 572 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 LMAN1P49257 510 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 ZNF165P49910 485 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
COL2A1-201ENST00000337299 AXDND1Q5T1B0 1012 aaPredicted RBP15.68■□□□□ 0.1
COL2A1-201ENST00000337299 CNTROBQ8N137 903 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 CCDC102AQ96A19 550 aa15.68■□□□□ 0.1
COL2A1-201ENST00000337299 IDI1Q13907 227 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 C10orf67Q8IYJ2 551 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 CERS3Q8IU89 383 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 DDX11Q96FC9 970 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 TSPYL1Q9H0U9 437 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 SERPINC1P01008 464 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 TTC22Q5TAA0 569 aa15.67■□□□□ 0.1
COL2A1-201ENST00000337299 C9orf78Q9NZ63 289 aaPredicted RBP15.66■□□□□ 0.1
COL2A1-201ENST00000337299 GNAI2P04899 355 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 BMS1Q14692 1282 aaKnown RBP15.66■□□□□ 0.1
COL2A1-201ENST00000337299 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 TESK2Q96S53 571 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 FEZ1Q99689 392 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 STX6O43752 255 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 UBE2HP62256 183 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
COL2A1-201ENST00000337299 WAPLQ7Z5K2 1190 aa15.65■□□□□ 0.1
COL2A1-201ENST00000337299 MX1P20591 662 aa15.65■□□□□ 0.1
COL2A1-201ENST00000337299 ACBD3Q9H3P7 528 aa15.65■□□□□ 0.1
COL2A1-201ENST00000337299 ZSWIM4Q9H7M6 989 aa15.65■□□□□ 0.1
COL2A1-201ENST00000337299 SLC52A1Q9NWF4 448 aa15.65■□□□□ 0.1
COL2A1-201ENST00000337299 CPLX1O14810 134 aa15.65■□□□□ 0.1
COL2A1-201ENST00000337299 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL2A1-201ENST00000337299 RPAP2Q8IXW5 612 aaPredicted RBP15.64■□□□□ 0.09
COL2A1-201ENST00000337299 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.09
COL2A1-201ENST00000337299 FAM193AP78312 1265 aa15.64■□□□□ 0.09
COL2A1-201ENST00000337299 PAXBP1Q9Y5B6 917 aa15.64■□□□□ 0.09
COL2A1-201ENST00000337299 SYNE3Q6ZMZ3 975 aa15.64■□□□□ 0.09
COL2A1-201ENST00000337299 CEP57L1Q8IYX8 460 aa15.64■□□□□ 0.09
COL2A1-201ENST00000337299 CDK19Q9BWU1 502 aa15.64■□□□□ 0.09
COL2A1-201ENST00000337299 TPM1P09493 284 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 GTF2A1P52655 376 aaPredicted RBP15.63■□□□□ 0.09
COL2A1-201ENST00000337299 BRPF1P55201 1214 aaPredicted RBP15.63■□□□□ 0.09
COL2A1-201ENST00000337299 CEBPAP49715 358 aaPredicted RBP15.63■□□□□ 0.09
COL2A1-201ENST00000337299 SKILP12757 684 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 LUZP1Q86V48 1076 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 FSD1Q9BTV5 496 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 F6X3S4 739 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 DNM1Q05193 864 aaKnown RBP15.63■□□□□ 0.09
COL2A1-201ENST00000337299 ANO6Q4KMQ2 910 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 RASSF8Q8NHQ8 419 aa15.63■□□□□ 0.09
COL2A1-201ENST00000337299 PPFIA3O75145 1194 aa15.62■□□□□ 0.09
COL2A1-201ENST00000337299 GPT2Q8TD30 523 aa15.62■□□□□ 0.09
COL2A1-201ENST00000337299 ZBTB40Q9NUA8 1239 aa15.62■□□□□ 0.09
COL2A1-201ENST00000337299 RDXP35241 583 aaKnown RBP15.62■□□□□ 0.09
COL2A1-201ENST00000337299 PSME1Q06323 249 aa15.62■□□□□ 0.09
COL2A1-201ENST00000337299 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
COL2A1-201ENST00000337299 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
COL2A1-201ENST00000337299 GNAI3P08754 354 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms