RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
TRIM16-201ENST00000336708 LTN1O94822 1766 aa12.35□□□□□ -0.43
TRIM16-201ENST00000336708 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
TRIM16-201ENST00000336708 USP35Q9P2H5 1018 aa12.35□□□□□ -0.43
TRIM16-201ENST00000336708 RGS12O14924 1447 aa12.34□□□□□ -0.43
TRIM16-201ENST00000336708 SEC24BO95487 1268 aa12.34□□□□□ -0.43
TRIM16-201ENST00000336708 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
TRIM16-201ENST00000336708 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
TRIM16-201ENST00000336708 NFAT5O94916 1531 aa12.33□□□□□ -0.44
TRIM16-201ENST00000336708 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
TRIM16-201ENST00000336708 NUCB1Q02818 461 aa12.33□□□□□ -0.44
TRIM16-201ENST00000336708 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
TRIM16-201ENST00000336708 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
TRIM16-201ENST00000336708 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.44
TRIM16-201ENST00000336708 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
TRIM16-201ENST00000336708 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
TRIM16-201ENST00000336708 N4BP2Q86UW6 1770 aaPredicted RBP12.31□□□□□ -0.44
TRIM16-201ENST00000336708 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
TRIM16-201ENST00000336708 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
TRIM16-201ENST00000336708 EYA1Q99502 592 aa12.31□□□□□ -0.44
TRIM16-201ENST00000336708 FAM208AQ9UK61 1670 aaKnown RBP12.31□□□□□ -0.44
TRIM16-201ENST00000336708 MTHFSDQ2M296 383 aaKnown RBP12.31□□□□□ -0.44
TRIM16-201ENST00000336708 HOXC9P31274 260 aa12.3□□□□□ -0.44
TRIM16-201ENST00000336708 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
TRIM16-201ENST00000336708 MCM10Q7L590 875 aa12.3□□□□□ -0.44
TRIM16-201ENST00000336708 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
TRIM16-201ENST00000336708 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
TRIM16-201ENST00000336708 ELL2O00472 640 aaPredicted RBP12.3□□□□□ -0.44
TRIM16-201ENST00000336708 NLRP6P59044 892 aa12.29□□□□□ -0.44
TRIM16-201ENST00000336708 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
TRIM16-201ENST00000336708 AMPHP49418 695 aa12.29□□□□□ -0.44
TRIM16-201ENST00000336708 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
TRIM16-201ENST00000336708 PTPRCP08575 1304 aa12.29□□□□□ -0.44
TRIM16-201ENST00000336708 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
TRIM16-201ENST00000336708 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
TRIM16-201ENST00000336708 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
TRIM16-201ENST00000336708 CHD1LQ86WJ1 897 aa12.28□□□□□ -0.44
TRIM16-201ENST00000336708 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
TRIM16-201ENST00000336708 PODXL2Q9NZ53 605 aa12.28□□□□□ -0.44
TRIM16-201ENST00000336708 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
TRIM16-201ENST00000336708 SLIT3O75094 1523 aa12.28□□□□□ -0.44
TRIM16-201ENST00000336708 MED1Q15648 1581 aaPredicted RBP12.28□□□□□ -0.44
TRIM16-201ENST00000336708 CAMTA1Q9Y6Y1 1673 aa12.27□□□□□ -0.44
TRIM16-201ENST00000336708 FOXO3O43524 673 aa12.27□□□□□ -0.45
TRIM16-201ENST00000336708 ATP10DQ9P241 1426 aa12.27□□□□□ -0.45
TRIM16-201ENST00000336708 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 SOX12O15370 315 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 MSH6P52701 1360 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 FRAT2O75474 233 aaPredicted RBP12.26□□□□□ -0.45
TRIM16-201ENST00000336708 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
TRIM16-201ENST00000336708 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
TRIM16-201ENST00000336708 MST1RQ04912 1400 aa12.25□□□□□ -0.45
TRIM16-201ENST00000336708 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
TRIM16-201ENST00000336708 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
TRIM16-201ENST00000336708 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
TRIM16-201ENST00000336708 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
TRIM16-201ENST00000336708 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
TRIM16-201ENST00000336708 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
TRIM16-201ENST00000336708 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
TRIM16-201ENST00000336708 IP6K1Q92551 441 aa12.24□□□□□ -0.45
TRIM16-201ENST00000336708 MAP3K5Q99683 1374 aa12.24□□□□□ -0.45
TRIM16-201ENST00000336708 GNAT3A8MTJ3 354 aa12.24□□□□□ -0.45
TRIM16-201ENST00000336708 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
TRIM16-201ENST00000336708 DCTPP1Q9H773 170 aa12.23□□□□□ -0.45
TRIM16-201ENST00000336708 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
TRIM16-201ENST00000336708 BECN1Q14457 450 aa12.22□□□□□ -0.45
TRIM16-201ENST00000336708 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
TRIM16-201ENST00000336708 LNPKQ9C0E8 428 aa12.22□□□□□ -0.45
TRIM16-201ENST00000336708 CEMIPQ8WUJ3 1361 aa12.22□□□□□ -0.45
TRIM16-201ENST00000336708 FAM43AQ8N2R8 423 aa12.22□□□□□ -0.45
TRIM16-201ENST00000336708 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
TRIM16-201ENST00000336708 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.45
TRIM16-201ENST00000336708 RPAP2Q8IXW5 612 aaPredicted RBP12.21□□□□□ -0.45
TRIM16-201ENST00000336708 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.45
TRIM16-201ENST00000336708 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
TRIM16-201ENST00000336708 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.46
TRIM16-201ENST00000336708 ANKRD45Q5TZF3 282 aa12.21□□□□□ -0.46
TRIM16-201ENST00000336708 IL17REQ8NFR9 667 aa12.21□□□□□ -0.46
TRIM16-201ENST00000336708 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.46
TRIM16-201ENST00000336708 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
TRIM16-201ENST00000336708 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
TRIM16-201ENST00000336708 C22orf23Q9BZE7 217 aa12.2□□□□□ -0.46
TRIM16-201ENST00000336708 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
TRIM16-201ENST00000336708 STRCQ7RTU9 1775 aa12.2□□□□□ -0.46
TRIM16-201ENST00000336708 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
TRIM16-201ENST00000336708 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
TRIM16-201ENST00000336708 A0A0U1RQG5 324 aaPredicted RBP12.19□□□□□ -0.46
TRIM16-201ENST00000336708 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
TRIM16-201ENST00000336708 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
TRIM16-201ENST00000336708 ANTXR1Q9H6X2 564 aa12.19□□□□□ -0.46
TRIM16-201ENST00000336708 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
TRIM16-201ENST00000336708 OVOS2A0A0G2JMS6 1433 aa12.18□□□□□ -0.46
TRIM16-201ENST00000336708 CCT4P50991 539 aaKnown RBP12.18□□□□□ -0.46
TRIM16-201ENST00000336708 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
TRIM16-201ENST00000336708 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
TRIM16-201ENST00000336708 PSME1Q06323 249 aa12.18□□□□□ -0.46
TRIM16-201ENST00000336708 G2E3Q7L622 706 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms