RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
LSAMP-201ENST00000333617 RGPD8O14715 1765 aaPredicted RBP11.44□□□□□ -0.58
LSAMP-201ENST00000333617 DIP2AQ14689 1571 aa11.44□□□□□ -0.58
LSAMP-201ENST00000333617 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
LSAMP-201ENST00000333617 PPIP5K1Q6PFW1 1433 aa11.44□□□□□ -0.58
LSAMP-201ENST00000333617 PTGER2P43116 358 aa11.43□□□□□ -0.58
LSAMP-201ENST00000333617 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
LSAMP-201ENST00000333617 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
LSAMP-201ENST00000333617 SLFN5Q08AF3 891 aa11.42□□□□□ -0.58
LSAMP-201ENST00000333617 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
LSAMP-201ENST00000333617 RUNDC1Q96C34 613 aa11.42□□□□□ -0.58
LSAMP-201ENST00000333617 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
LSAMP-201ENST00000333617 ZNF142P52746 1687 aaPredicted RBP11.42□□□□□ -0.58
LSAMP-201ENST00000333617 ROBO2Q9HCK4 1378 aa11.42□□□□□ -0.58
LSAMP-201ENST00000333617 CPSF1Q10570 1443 aaKnown RBP11.42□□□□□ -0.58
LSAMP-201ENST00000333617 EDC4Q6P2E9 1401 aaKnown RBP11.42□□□□□ -0.58
LSAMP-201ENST00000333617 THEMISQ8N1K5 641 aaPredicted RBP11.41□□□□□ -0.58
LSAMP-201ENST00000333617 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
LSAMP-201ENST00000333617 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
LSAMP-201ENST00000333617 ADAMTSL3P82987 1691 aa11.41□□□□□ -0.58
LSAMP-201ENST00000333617 POTEEQ6S8J3 1075 aa11.41□□□□□ -0.58
LSAMP-201ENST00000333617 TRMT2AQ8IZ69 625 aaKnown RBP11.41□□□□□ -0.58
LSAMP-201ENST00000333617 NUDT16Q96DE0 195 aaKnown RBP11.41□□□□□ -0.58
LSAMP-201ENST00000333617 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
LSAMP-201ENST00000333617 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
LSAMP-201ENST00000333617 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.58
LSAMP-201ENST00000333617 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
LSAMP-201ENST00000333617 E9PSI1 815 aa11.4□□□□□ -0.58
LSAMP-201ENST00000333617 ARHGAP33O14559 1287 aa11.4□□□□□ -0.58
LSAMP-201ENST00000333617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.4□□□□□ -0.58
LSAMP-201ENST00000333617 CHD2O14647 1828 aaKnown RBP11.4□□□□□ -0.59
LSAMP-201ENST00000333617 PTPRUQ92729 1446 aa11.39□□□□□ -0.59
LSAMP-201ENST00000333617 U2AF1L5P0DN76 240 aaPredicted RBP11.39□□□□□ -0.59
LSAMP-201ENST00000333617 U2AF1Q01081 240 aaKnown RBP eCLIP11.39□□□□□ -0.59
LSAMP-201ENST00000333617 SLC26A8Q96RN1 970 aa11.39□□□□□ -0.59
LSAMP-201ENST00000333617 NRKQ7Z2Y5 1582 aa11.39□□□□□ -0.59
LSAMP-201ENST00000333617 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
LSAMP-201ENST00000333617 TCP11L2Q8N4U5 519 aa11.38□□□□□ -0.59
LSAMP-201ENST00000333617 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
LSAMP-201ENST00000333617 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
LSAMP-201ENST00000333617 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
LSAMP-201ENST00000333617 EXOC6Q8TAG9 804 aa11.37□□□□□ -0.59
LSAMP-201ENST00000333617 PNPLA6Q8IY17 1366 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 NALCNQ8IZF0 1738 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
LSAMP-201ENST00000333617 PLIN1O60240 522 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 NEUROD2Q15784 382 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 CCDC27Q2M243 656 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
LSAMP-201ENST00000333617 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 RRP7AQ9Y3A4 280 aaKnown RBP11.36□□□□□ -0.59
LSAMP-201ENST00000333617 PRR36Q9H6K5 1346 aa11.36□□□□□ -0.59
LSAMP-201ENST00000333617 EVI5O60447 810 aa11.35□□□□□ -0.59
LSAMP-201ENST00000333617 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
LSAMP-201ENST00000333617 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
LSAMP-201ENST00000333617 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
LSAMP-201ENST00000333617 FMN2Q9NZ56 1722 aa11.34□□□□□ -0.59
LSAMP-201ENST00000333617 NME9Q86XW9 330 aa11.34□□□□□ -0.59
LSAMP-201ENST00000333617 ZNF454Q8N9F8 522 aa11.34□□□□□ -0.59
LSAMP-201ENST00000333617 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
LSAMP-201ENST00000333617 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 POLKQ9UBT6 870 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
LSAMP-201ENST00000333617 AATKQ6ZMQ8 1374 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 PIK3R4Q99570 1358 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 MAPK8IP3Q9UPT6 1336 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 COG3Q96JB2 828 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
LSAMP-201ENST00000333617 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
LSAMP-201ENST00000333617 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
LSAMP-201ENST00000333617 PAXIP1Q6ZW49 1069 aaPredicted RBP11.32□□□□□ -0.6
LSAMP-201ENST00000333617 RBM19Q9Y4C8 960 aaKnown RBP11.32□□□□□ -0.6
LSAMP-201ENST00000333617 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
LSAMP-201ENST00000333617 PPM1GO15355 546 aaPredicted RBP11.31□□□□□ -0.6
LSAMP-201ENST00000333617 PSEN2P49810 448 aa11.31□□□□□ -0.6
LSAMP-201ENST00000333617 FOSBP53539 338 aa11.31□□□□□ -0.6
LSAMP-201ENST00000333617 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
LSAMP-201ENST00000333617 USP6P35125 1406 aa11.31□□□□□ -0.6
LSAMP-201ENST00000333617 ACEP12821 1306 aa11.3□□□□□ -0.6
LSAMP-201ENST00000333617 FBLN1P23142 703 aa11.3□□□□□ -0.6
LSAMP-201ENST00000333617 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
LSAMP-201ENST00000333617 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
LSAMP-201ENST00000333617 MYH16Q9H6N6 1097 aa11.3□□□□□ -0.6
LSAMP-201ENST00000333617 TTC21BQ7Z4L5 1316 aa11.3□□□□□ -0.6
LSAMP-201ENST00000333617 TK2O00142 265 aa11.29□□□□□ -0.6
LSAMP-201ENST00000333617 FCHSD2O94868 740 aa11.29□□□□□ -0.6
LSAMP-201ENST00000333617 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
LSAMP-201ENST00000333617 C20orf194Q5TEA3 1177 aa11.29□□□□□ -0.6
LSAMP-201ENST00000333617 ANKLE2Q86XL3 938 aa11.29□□□□□ -0.6
LSAMP-201ENST00000333617 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
LSAMP-201ENST00000333617 NEFMP07197 916 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 EMILIN1Q9Y6C2 1016 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 ANKARQ7Z5J8 1434 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms