RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
CCDC172-201ENST00000333254 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
CCDC172-201ENST00000333254 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
CCDC172-201ENST00000333254 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
CCDC172-201ENST00000333254 IGSF1Q8N6C5 1336 aa13.47□□□□□ -0.25
CCDC172-201ENST00000333254 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
CCDC172-201ENST00000333254 SNX21Q969T3 373 aa13.47□□□□□ -0.25
CCDC172-201ENST00000333254 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
CCDC172-201ENST00000333254 FRAT2O75474 233 aaPredicted RBP13.46□□□□□ -0.26
CCDC172-201ENST00000333254 NWD1Q149M9 1564 aa13.45□□□□□ -0.26
CCDC172-201ENST00000333254 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
CCDC172-201ENST00000333254 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
CCDC172-201ENST00000333254 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
CCDC172-201ENST00000333254 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
CCDC172-201ENST00000333254 RPAP2Q8IXW5 612 aaPredicted RBP13.44□□□□□ -0.26
CCDC172-201ENST00000333254 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
CCDC172-201ENST00000333254 DCTPP1Q9H773 170 aa13.44□□□□□ -0.26
CCDC172-201ENST00000333254 LTN1O94822 1766 aa13.44□□□□□ -0.26
CCDC172-201ENST00000333254 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
CCDC172-201ENST00000333254 BABAM1Q9NWV8 329 aa13.44□□□□□ -0.26
CCDC172-201ENST00000333254 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
CCDC172-201ENST00000333254 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
CCDC172-201ENST00000333254 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
CCDC172-201ENST00000333254 GAS2L2Q8NHY3 880 aa13.43□□□□□ -0.26
CCDC172-201ENST00000333254 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
CCDC172-201ENST00000333254 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
CCDC172-201ENST00000333254 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
CCDC172-201ENST00000333254 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
CCDC172-201ENST00000333254 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
CCDC172-201ENST00000333254 ELL2O00472 640 aaPredicted RBP13.4□□□□□ -0.26
CCDC172-201ENST00000333254 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
CCDC172-201ENST00000333254 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
CCDC172-201ENST00000333254 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
CCDC172-201ENST00000333254 KDM3BQ7LBC6 1761 aa13.39□□□□□ -0.27
CCDC172-201ENST00000333254 MSH6P52701 1360 aa13.39□□□□□ -0.27
CCDC172-201ENST00000333254 CDC45O75419 566 aa13.39□□□□□ -0.27
CCDC172-201ENST00000333254 DDIT3P35638 169 aa13.39□□□□□ -0.27
CCDC172-201ENST00000333254 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
CCDC172-201ENST00000333254 SLKQ9H2G2 1235 aaPredicted RBP13.39□□□□□ -0.27
CCDC172-201ENST00000333254 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
CCDC172-201ENST00000333254 NFAT5O94916 1531 aa13.38□□□□□ -0.27
CCDC172-201ENST00000333254 CEBPAP49715 358 aaPredicted RBP13.38□□□□□ -0.27
CCDC172-201ENST00000333254 MCM10Q7L590 875 aa13.38□□□□□ -0.27
CCDC172-201ENST00000333254 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
CCDC172-201ENST00000333254 C1orf115Q9H7X2 142 aa13.38□□□□□ -0.27
CCDC172-201ENST00000333254 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
CCDC172-201ENST00000333254 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
CCDC172-201ENST00000333254 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
CCDC172-201ENST00000333254 CEP85Q6P2H3 762 aa13.37□□□□□ -0.27
CCDC172-201ENST00000333254 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
CCDC172-201ENST00000333254 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
CCDC172-201ENST00000333254 EYA1Q99502 592 aa13.37□□□□□ -0.27
CCDC172-201ENST00000333254 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 CAMTA1Q9Y6Y1 1673 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 HMMRO75330 724 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 AMPHP49418 695 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 TTC22Q5TAA0 569 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 KIF2CQ99661 725 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
CCDC172-201ENST00000333254 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
CCDC172-201ENST00000333254 HOXC9P31274 260 aa13.35□□□□□ -0.27
CCDC172-201ENST00000333254 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
CCDC172-201ENST00000333254 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
CCDC172-201ENST00000333254 MCM4P33991 863 aa13.34□□□□□ -0.27
CCDC172-201ENST00000333254 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
CCDC172-201ENST00000333254 GSPT1P15170 499 aaKnown RBP13.34□□□□□ -0.27
CCDC172-201ENST00000333254 PTMSP20962 102 aa13.34□□□□□ -0.27
CCDC172-201ENST00000333254 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
CCDC172-201ENST00000333254 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 GNAT3A8MTJ3 354 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 NLRP6P59044 892 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
CCDC172-201ENST00000333254 KCNA6P17658 529 aa13.32□□□□□ -0.28
CCDC172-201ENST00000333254 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
CCDC172-201ENST00000333254 L1TD1Q5T7N2 865 aaKnown RBP13.32□□□□□ -0.28
CCDC172-201ENST00000333254 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
CCDC172-201ENST00000333254 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
CCDC172-201ENST00000333254 SLIT3O75094 1523 aa13.32□□□□□ -0.28
CCDC172-201ENST00000333254 MEIS3Q99687 375 aa13.31□□□□□ -0.28
CCDC172-201ENST00000333254 CEMIPQ8WUJ3 1361 aa13.31□□□□□ -0.28
CCDC172-201ENST00000333254 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
CCDC172-201ENST00000333254 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
CCDC172-201ENST00000333254 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
CCDC172-201ENST00000333254 GNAI3P08754 354 aa13.31□□□□□ -0.28
CCDC172-201ENST00000333254 RABEP1Q15276 862 aa13.31□□□□□ -0.28
CCDC172-201ENST00000333254 ISY1Q9ULR0 285 aaKnown RBP13.31□□□□□ -0.28
CCDC172-201ENST00000333254 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
CCDC172-201ENST00000333254 FOXO3O43524 673 aa13.3□□□□□ -0.28
CCDC172-201ENST00000333254 HOXB7P09629 217 aa13.3□□□□□ -0.28
CCDC172-201ENST00000333254 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
CCDC172-201ENST00000333254 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
CCDC172-201ENST00000333254 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
CCDC172-201ENST00000333254 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
CCDC172-201ENST00000333254 GNAI2P04899 355 aa13.29□□□□□ -0.28
CCDC172-201ENST00000333254 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
CCDC172-201ENST00000333254 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms