RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
SRPRA-201ENST00000332118 MSH6P52701 1360 aa17.42■□□□□ 0.38
SRPRA-201ENST00000332118 COL18A1P39060 1754 aa17.42■□□□□ 0.38
SRPRA-201ENST00000332118 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
SRPRA-201ENST00000332118 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
SRPRA-201ENST00000332118 ANP32AP39687 249 aaKnown RBP17.41■□□□□ 0.38
SRPRA-201ENST00000332118 NLRP6P59044 892 aa17.41■□□□□ 0.38
SRPRA-201ENST00000332118 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
SRPRA-201ENST00000332118 SMC5Q8IY18 1101 aa17.41■□□□□ 0.38
SRPRA-201ENST00000332118 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
SRPRA-201ENST00000332118 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
SRPRA-201ENST00000332118 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
SRPRA-201ENST00000332118 KCNH5Q8NCM2 988 aa17.4■□□□□ 0.38
SRPRA-201ENST00000332118 IP6K1Q92551 441 aa17.4■□□□□ 0.38
SRPRA-201ENST00000332118 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
SRPRA-201ENST00000332118 FAM83GA6ND36 823 aa17.39■□□□□ 0.38
SRPRA-201ENST00000332118 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.38
SRPRA-201ENST00000332118 CEMIPQ8WUJ3 1361 aa17.39■□□□□ 0.37
SRPRA-201ENST00000332118 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
SRPRA-201ENST00000332118 STRCQ7RTU9 1775 aa17.39■□□□□ 0.37
SRPRA-201ENST00000332118 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
SRPRA-201ENST00000332118 ABTB2Q8N961 1025 aa17.38■□□□□ 0.37
SRPRA-201ENST00000332118 AMPHP49418 695 aa17.37■□□□□ 0.37
SRPRA-201ENST00000332118 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
SRPRA-201ENST00000332118 PTPRCP08575 1304 aa17.37■□□□□ 0.37
SRPRA-201ENST00000332118 MAP3K5Q99683 1374 aa17.37■□□□□ 0.37
SRPRA-201ENST00000332118 API5Q9BZZ5 524 aaKnown RBP17.36■□□□□ 0.37
SRPRA-201ENST00000332118 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
SRPRA-201ENST00000332118 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
SRPRA-201ENST00000332118 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
SRPRA-201ENST00000332118 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
SRPRA-201ENST00000332118 PXDNQ92626 1479 aa17.34■□□□□ 0.37
SRPRA-201ENST00000332118 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
SRPRA-201ENST00000332118 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
SRPRA-201ENST00000332118 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
SRPRA-201ENST00000332118 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
SRPRA-201ENST00000332118 RGPD5Q99666 1765 aa17.33■□□□□ 0.36
SRPRA-201ENST00000332118 PKD1L3Q7Z443 1732 aa17.32■□□□□ 0.36
SRPRA-201ENST00000332118 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
SRPRA-201ENST00000332118 ATP10DQ9P241 1426 aa17.32■□□□□ 0.36
SRPRA-201ENST00000332118 MCM10Q7L590 875 aa17.32■□□□□ 0.36
SRPRA-201ENST00000332118 PARP4Q9UKK3 1724 aaKnown RBP17.31■□□□□ 0.36
SRPRA-201ENST00000332118 NBR1Q14596 966 aa17.31■□□□□ 0.36
SRPRA-201ENST00000332118 LAS1LQ9Y4W2 734 aaKnown RBP17.31■□□□□ 0.36
SRPRA-201ENST00000332118 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
SRPRA-201ENST00000332118 ESCO1Q5FWF5 840 aa17.31■□□□□ 0.36
SRPRA-201ENST00000332118 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
SRPRA-201ENST00000332118 NUCB1Q02818 461 aa17.3■□□□□ 0.36
SRPRA-201ENST00000332118 PSME1Q06323 249 aa17.29■□□□□ 0.36
SRPRA-201ENST00000332118 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
SRPRA-201ENST00000332118 ABCA3Q99758 1704 aa17.29■□□□□ 0.36
SRPRA-201ENST00000332118 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
SRPRA-201ENST00000332118 FOXO3O43524 673 aa17.28■□□□□ 0.36
SRPRA-201ENST00000332118 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.36
SRPRA-201ENST00000332118 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
SRPRA-201ENST00000332118 TMEM94Q12767 1356 aa17.27■□□□□ 0.36
SRPRA-201ENST00000332118 RGS3P49796 1198 aa17.27■□□□□ 0.35
SRPRA-201ENST00000332118 MRC1P22897 1456 aa17.26■□□□□ 0.35
SRPRA-201ENST00000332118 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
SRPRA-201ENST00000332118 GCP02774 474 aa17.26■□□□□ 0.35
SRPRA-201ENST00000332118 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
SRPRA-201ENST00000332118 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
SRPRA-201ENST00000332118 HOXB7P09629 217 aa17.25■□□□□ 0.35
SRPRA-201ENST00000332118 PROSER2Q86WR7 435 aaPredicted RBP17.25■□□□□ 0.35
SRPRA-201ENST00000332118 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
SRPRA-201ENST00000332118 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
SRPRA-201ENST00000332118 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
SRPRA-201ENST00000332118 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
SRPRA-201ENST00000332118 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
SRPRA-201ENST00000332118 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
SRPRA-201ENST00000332118 CPDO75976 1380 aa17.24■□□□□ 0.35
SRPRA-201ENST00000332118 ZBTB47Q9UFB7 747 aaPredicted RBP17.24■□□□□ 0.35
SRPRA-201ENST00000332118 NHSL1Q5SYE7 1610 aa17.23■□□□□ 0.35
SRPRA-201ENST00000332118 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
SRPRA-201ENST00000332118 SOX12O15370 315 aa17.22■□□□□ 0.35
SRPRA-201ENST00000332118 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
SRPRA-201ENST00000332118 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
SRPRA-201ENST00000332118 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
SRPRA-201ENST00000332118 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
SRPRA-201ENST00000332118 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
SRPRA-201ENST00000332118 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
SRPRA-201ENST00000332118 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
SRPRA-201ENST00000332118 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
SRPRA-201ENST00000332118 RBM33Q96EV2 1170 aaKnown RBP17.21■□□□□ 0.35
SRPRA-201ENST00000332118 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
SRPRA-201ENST00000332118 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
SRPRA-201ENST00000332118 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
SRPRA-201ENST00000332118 DCTPP1Q9H773 170 aa17.19■□□□□ 0.34
SRPRA-201ENST00000332118 ERBB3P21860 1342 aa17.19■□□□□ 0.34
SRPRA-201ENST00000332118 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
SRPRA-201ENST00000332118 GLI3P10071 1580 aa17.19■□□□□ 0.34
SRPRA-201ENST00000332118 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
SRPRA-201ENST00000332118 TBC1D32Q96NH3 1257 aa17.18■□□□□ 0.34
SRPRA-201ENST00000332118 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
SRPRA-201ENST00000332118 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
SRPRA-201ENST00000332118 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
SRPRA-201ENST00000332118 PAPPAQ13219 1627 aa17.17■□□□□ 0.34
SRPRA-201ENST00000332118 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
SRPRA-201ENST00000332118 SEC24BO95487 1268 aa17.16■□□□□ 0.34
SRPRA-201ENST00000332118 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms