RNA–Protein interactions for RNA: ENST00000331587.8

CALCA-201, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-201ENST00000331587 ACSBG1Q96GR2 724 aa20.13■□□□□ 0.81
CALCA-201ENST00000331587 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
CALCA-201ENST00000331587 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
CALCA-201ENST00000331587 EYA1Q99502 592 aa20.12■□□□□ 0.81
CALCA-201ENST00000331587 PKD1L3Q7Z443 1732 aa20.12■□□□□ 0.81
CALCA-201ENST00000331587 BTAF1O14981 1849 aa20.1■□□□□ 0.81
CALCA-201ENST00000331587 RGPD3A6NKT7 1758 aaPredicted RBP20.1■□□□□ 0.81
CALCA-201ENST00000331587 RGPD4Q7Z3J3 1758 aa20.1■□□□□ 0.81
CALCA-201ENST00000331587 ZCRB1Q8TBF4 217 aaKnown RBP20.09■□□□□ 0.81
CALCA-201ENST00000331587 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
CALCA-201ENST00000331587 TOGARAM1Q9Y4F4 1720 aa20.08■□□□□ 0.81
CALCA-201ENST00000331587 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
CALCA-201ENST00000331587 TATP17735 454 aaPredicted RBP20.06■□□□□ 0.8
CALCA-201ENST00000331587 PROM2Q8N271 834 aa20.06■□□□□ 0.8
CALCA-201ENST00000331587 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
CALCA-201ENST00000331587 NPC1L1Q9UHC9 1359 aa20.05■□□□□ 0.8
CALCA-201ENST00000331587 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
CALCA-201ENST00000331587 CYP27B1O15528 508 aa20.04■□□□□ 0.8
CALCA-201ENST00000331587 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
CALCA-201ENST00000331587 MTHFSP49914 203 aa20.03■□□□□ 0.8
CALCA-201ENST00000331587 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
CALCA-201ENST00000331587 PARD3Q8TEW0 1356 aa20.03■□□□□ 0.8
CALCA-201ENST00000331587 PLSCR1O15162 318 aa20.02■□□□□ 0.8
CALCA-201ENST00000331587 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.8
CALCA-201ENST00000331587 IL13P35225 146 aa20.01■□□□□ 0.79
CALCA-201ENST00000331587 R3HDM1Q15032 1099 aaKnown RBP20.01■□□□□ 0.79
CALCA-201ENST00000331587 SRCAPQ6ZRS2 3230 aa20■□□□□ 0.79
CALCA-201ENST00000331587 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
CALCA-201ENST00000331587 ITGB4P16144 1822 aa19.99■□□□□ 0.79
CALCA-201ENST00000331587 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
CALCA-201ENST00000331587 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
CALCA-201ENST00000331587 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
CALCA-201ENST00000331587 PAPPAQ13219 1627 aa19.98■□□□□ 0.79
CALCA-201ENST00000331587 TXNRD1Q16881 649 aa19.97■□□□□ 0.79
CALCA-201ENST00000331587 SYTL4Q96C24 671 aaPredicted RBP19.97■□□□□ 0.79
CALCA-201ENST00000331587 LY75O60449 1722 aa19.96■□□□□ 0.79
CALCA-201ENST00000331587 KDRP35968 1356 aa19.95■□□□□ 0.78
CALCA-201ENST00000331587 KCNQ4P56696 695 aa19.94■□□□□ 0.78
CALCA-201ENST00000331587 SULT6B1Q6IMI4 303 aa19.94■□□□□ 0.78
CALCA-201ENST00000331587 LRRC4BQ9NT99 713 aa19.94■□□□□ 0.78
CALCA-201ENST00000331587 PHKG2P15735 406 aa19.93■□□□□ 0.78
CALCA-201ENST00000331587 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
CALCA-201ENST00000331587 NKX1-1Q15270 411 aaPredicted RBP19.92■□□□□ 0.78
CALCA-201ENST00000331587 PDGFDQ9GZP0 370 aaPredicted RBP19.92■□□□□ 0.78
CALCA-201ENST00000331587 CASZ1Q86V15 1759 aa19.92■□□□□ 0.78
CALCA-201ENST00000331587 HMOX1P09601 288 aa19.91■□□□□ 0.78
CALCA-201ENST00000331587 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
CALCA-201ENST00000331587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.91■□□□□ 0.78
CALCA-201ENST00000331587 DIAPH1O60610 1272 aaKnown RBP19.9■□□□□ 0.78
CALCA-201ENST00000331587 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
CALCA-201ENST00000331587 LRP5O75197 1615 aa19.9■□□□□ 0.78
CALCA-201ENST00000331587 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
CALCA-201ENST00000331587 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
CALCA-201ENST00000331587 ZNF827Q17R98 1081 aa19.88■□□□□ 0.77
CALCA-201ENST00000331587 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
CALCA-201ENST00000331587 IFNL2Q8IZJ0 200 aa19.88■□□□□ 0.77
CALCA-201ENST00000331587 NBPF14Q5TI25 921 aa19.87■□□□□ 0.77
CALCA-201ENST00000331587 ZNF530Q6P9A1 599 aaPredicted RBP19.87■□□□□ 0.77
CALCA-201ENST00000331587 PIGBQ92521 554 aa19.87■□□□□ 0.77
CALCA-201ENST00000331587 PLEKHG2Q9H7P9 1386 aa19.86■□□□□ 0.77
CALCA-201ENST00000331587 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
CALCA-201ENST00000331587 PLEKHO1Q53GL0 409 aaPredicted RBP19.85■□□□□ 0.77
CALCA-201ENST00000331587 TAF1LQ8IZX4 1826 aa19.85■□□□□ 0.77
CALCA-201ENST00000331587 SCN11AQ9UI33 1791 aa19.84■□□□□ 0.77
CALCA-201ENST00000331587 C5P01031 1676 aa19.84■□□□□ 0.77
CALCA-201ENST00000331587 U2SURPO15042 1029 aaKnown RBP19.83■□□□□ 0.77
CALCA-201ENST00000331587 SLC15A2Q16348 729 aa19.83■□□□□ 0.77
CALCA-201ENST00000331587 PALLDQ8WX93 1383 aa19.83■□□□□ 0.76
CALCA-201ENST00000331587 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
CALCA-201ENST00000331587 ZEB1P37275 1124 aaPredicted RBP19.81■□□□□ 0.76
CALCA-201ENST00000331587 MTHFSDQ2M296 383 aaKnown RBP19.81■□□□□ 0.76
CALCA-201ENST00000331587 AMOTQ4VCS5 1084 aa19.81■□□□□ 0.76
CALCA-201ENST00000331587 AKT1S1Q96B36 256 aa19.81■□□□□ 0.76
CALCA-201ENST00000331587 STK32BQ9NY57 414 aa19.81■□□□□ 0.76
CALCA-201ENST00000331587 QSER1Q2KHR3 1735 aa19.8■□□□□ 0.76
CALCA-201ENST00000331587 CCNL1Q9UK58 526 aaPredicted RBP19.8■□□□□ 0.76
CALCA-201ENST00000331587 ADAMTS7Q9UKP4 1686 aa19.8■□□□□ 0.76
CALCA-201ENST00000331587 SLC27A3Q5K4L6 730 aa19.79■□□□□ 0.76
CALCA-201ENST00000331587 LGR6Q9HBX8 967 aa19.79■□□□□ 0.76
CALCA-201ENST00000331587 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
CALCA-201ENST00000331587 DCAF5Q96JK2 942 aa19.78■□□□□ 0.76
CALCA-201ENST00000331587 ATG3Q9NT62 314 aa19.78■□□□□ 0.76
CALCA-201ENST00000331587 C1orf141Q5JVX7 400 aa19.77■□□□□ 0.76
CALCA-201ENST00000331587 PHACTR3Q96KR7 559 aa19.77■□□□□ 0.76
CALCA-201ENST00000331587 CFAP53Q96M91 514 aa19.77■□□□□ 0.76
CALCA-201ENST00000331587 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
CALCA-201ENST00000331587 C4BP0C0L5 1744 aa19.76■□□□□ 0.75
CALCA-201ENST00000331587 ERVV-2B6SEH9 535 aa19.76■□□□□ 0.75
CALCA-201ENST00000331587 ZBTB7AO95365 584 aa19.76■□□□□ 0.75
CALCA-201ENST00000331587 SLC4A9Q96Q91 983 aa19.76■□□□□ 0.75
CALCA-201ENST00000331587 AKAP4Q5JQC9 854 aa19.75■□□□□ 0.75
CALCA-201ENST00000331587 SMIM5Q71RC9 77 aa19.75■□□□□ 0.75
CALCA-201ENST00000331587 AMIGO3Q86WK7 504 aa19.75■□□□□ 0.75
CALCA-201ENST00000331587 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
CALCA-201ENST00000331587 MRC1P22897 1456 aa19.74■□□□□ 0.75
CALCA-201ENST00000331587 HSP90AB1P08238 724 aaKnown RBP19.74■□□□□ 0.75
CALCA-201ENST00000331587 PRKAR2BP31323 418 aa19.74■□□□□ 0.75
CALCA-201ENST00000331587 ITPK1Q13572 414 aa19.74■□□□□ 0.75
CALCA-201ENST00000331587 RNMTO43148 476 aaKnown RBP19.73■□□□□ 0.75
CALCA-201ENST00000331587 NFATC2IPQ8NCF5 419 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms