RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TBC1D2Q9BYX2 928 aa19.55■□□□□ 0.72
SYNM-201ENST00000328642 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
SYNM-201ENST00000328642 TRPM2O94759 1503 aa19.55■□□□□ 0.72
SYNM-201ENST00000328642 CWC27Q6UX04 472 aaKnown RBP19.54■□□□□ 0.72
SYNM-201ENST00000328642 PHAXQ9H814 394 aaKnown RBP19.54■□□□□ 0.72
SYNM-201ENST00000328642 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
SYNM-201ENST00000328642 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
SYNM-201ENST00000328642 CHPF2Q9P2E5 772 aa19.54■□□□□ 0.72
SYNM-201ENST00000328642 NEO1Q92859 1461 aa19.54■□□□□ 0.72
SYNM-201ENST00000328642 OTUD7AQ8TE49 926 aaPredicted RBP19.54■□□□□ 0.72
SYNM-201ENST00000328642 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
SYNM-201ENST00000328642 RPAP2Q8IXW5 612 aaPredicted RBP19.53■□□□□ 0.72
SYNM-201ENST00000328642 CLTCL1P53675 1640 aa19.53■□□□□ 0.72
SYNM-201ENST00000328642 FSD1Q9BTV5 496 aa19.53■□□□□ 0.72
SYNM-201ENST00000328642 GCP02774 474 aa19.53■□□□□ 0.72
SYNM-201ENST00000328642 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
SYNM-201ENST00000328642 TBX22Q9Y458 520 aa19.52■□□□□ 0.72
SYNM-201ENST00000328642 NPC1L1Q9UHC9 1359 aa19.52■□□□□ 0.72
SYNM-201ENST00000328642 MLH3Q9UHC1 1453 aa19.52■□□□□ 0.72
SYNM-201ENST00000328642 VPS37CA5D8V6 355 aaPredicted RBP19.52■□□□□ 0.72
SYNM-201ENST00000328642 TULP1O00294 542 aaPredicted RBP19.52■□□□□ 0.72
SYNM-201ENST00000328642 CCDC8Q9H0W5 538 aaPredicted RBP19.52■□□□□ 0.72
SYNM-201ENST00000328642 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
SYNM-201ENST00000328642 TMEM2Q9UHN6 1383 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 DTNBO60941 627 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 TBC1D9Q6ZT07 1266 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 AACSQ86V21 672 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 IL27Q8NEV9 243 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 PUS7Q96PZ0 661 aaKnown RBP19.51■□□□□ 0.71
SYNM-201ENST00000328642 APPP05067 770 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 HOXC9P31274 260 aa19.51■□□□□ 0.71
SYNM-201ENST00000328642 ZRSR1Q15695 479 aaKnown RBP19.51■□□□□ 0.71
SYNM-201ENST00000328642 L1TD1Q5T7N2 865 aaKnown RBP19.5■□□□□ 0.71
SYNM-201ENST00000328642 MYD88Q99836 296 aa19.5■□□□□ 0.71
SYNM-201ENST00000328642 ISY1Q9ULR0 285 aaKnown RBP19.5■□□□□ 0.71
SYNM-201ENST00000328642 ZMYM4Q5VZL5 1548 aa19.5■□□□□ 0.71
SYNM-201ENST00000328642 SPG7Q9UQ90 795 aa19.5■□□□□ 0.71
SYNM-201ENST00000328642 STK11IPQ8N1F8 1099 aa19.49■□□□□ 0.71
SYNM-201ENST00000328642 IL16Q14005 1332 aa19.49■□□□□ 0.71
SYNM-201ENST00000328642 ROBO2Q9HCK4 1378 aa19.49■□□□□ 0.71
SYNM-201ENST00000328642 ZBTB3Q9H5J0 574 aa19.49■□□□□ 0.71
SYNM-201ENST00000328642 ZNF521Q96K83 1311 aa19.49■□□□□ 0.71
SYNM-201ENST00000328642 PPP1R42Q7Z4L9 355 aa19.48■□□□□ 0.71
SYNM-201ENST00000328642 DNAAF4Q8WXU2 420 aa19.48■□□□□ 0.71
SYNM-201ENST00000328642 MAP3K2Q9Y2U5 619 aa19.48■□□□□ 0.71
SYNM-201ENST00000328642 ZKSCAN1P17029 563 aaPredicted RBP19.47■□□□□ 0.71
SYNM-201ENST00000328642 BOLA2Q9H3K6 86 aa19.47■□□□□ 0.71
SYNM-201ENST00000328642 WASHC4Q2M389 1173 aa19.47■□□□□ 0.71
SYNM-201ENST00000328642 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
SYNM-201ENST00000328642 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
SYNM-201ENST00000328642 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
SYNM-201ENST00000328642 TRAK2O60296 914 aa19.47■□□□□ 0.71
SYNM-201ENST00000328642 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
SYNM-201ENST00000328642 PLEKHF1Q96S99 279 aa19.46■□□□□ 0.71
SYNM-201ENST00000328642 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
SYNM-201ENST00000328642 ERC2O15083 957 aa19.46■□□□□ 0.71
SYNM-201ENST00000328642 KCNQ3O43525 872 aa19.46■□□□□ 0.71
SYNM-201ENST00000328642 ZBTB7BO15156 539 aaPredicted RBP19.46■□□□□ 0.71
SYNM-201ENST00000328642 STK3Q13188 491 aa19.46■□□□□ 0.71
SYNM-201ENST00000328642 GNL2Q13823 731 aaKnown RBP19.46■□□□□ 0.71
SYNM-201ENST00000328642 PA2G4Q9UQ80 394 aaKnown RBP19.46■□□□□ 0.71
SYNM-201ENST00000328642 MX1P20591 662 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 MPNDQ8N594 471 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 RNF214Q8ND24 703 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 RUFY2Q8WXA3 655 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 NUCB1Q02818 461 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 HSP90AB4PQ58FF6 505 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 CNTROBQ8N137 903 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 ARID3AQ99856 593 aa19.45■□□□□ 0.7
SYNM-201ENST00000328642 PPFIA3O75145 1194 aa19.44■□□□□ 0.7
SYNM-201ENST00000328642 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
SYNM-201ENST00000328642 FLT4P35916 1363 aa19.44■□□□□ 0.7
SYNM-201ENST00000328642 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 DDX11L8A8MPP1 907 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 ABCC3O15438 1527 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
SYNM-201ENST00000328642 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 PRPF40AO75400 957 aaKnown RBP19.43■□□□□ 0.7
SYNM-201ENST00000328642 GPTP24298 496 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
SYNM-201ENST00000328642 SBNO2Q9Y2G9 1366 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
SYNM-201ENST00000328642 SDSP20132 328 aa19.42■□□□□ 0.7
SYNM-201ENST00000328642 UBE3BQ7Z3V4 1068 aa19.42■□□□□ 0.7
SYNM-201ENST00000328642 CHMP4CQ96CF2 233 aa19.42■□□□□ 0.7
SYNM-201ENST00000328642 TBC1D32Q96NH3 1257 aa19.42■□□□□ 0.7
SYNM-201ENST00000328642 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
SYNM-201ENST00000328642 DBF4Q9UBU7 674 aaPredicted RBP19.42■□□□□ 0.7
SYNM-201ENST00000328642 FBXW7Q969H0 707 aa19.41■□□□□ 0.7
SYNM-201ENST00000328642 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
SYNM-201ENST00000328642 K7ELQ4 463 aaPredicted RBP19.41■□□□□ 0.7
SYNM-201ENST00000328642 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
SYNM-201ENST00000328642 CAVIN1Q6NZI2 390 aaKnown RBP19.41■□□□□ 0.7
SYNM-201ENST00000328642 E9PCH4 1651 aa19.41■□□□□ 0.7
SYNM-201ENST00000328642 KDM5AP29375 1690 aaKnown RBP19.41■□□□□ 0.7
SYNM-201ENST00000328642 PLXNC1O60486 1568 aa19.41■□□□□ 0.7
SYNM-201ENST00000328642 EDC4Q6P2E9 1401 aaKnown RBP19.41■□□□□ 0.7
SYNM-201ENST00000328642 EFCAB6Q5THR3 1501 aa19.4■□□□□ 0.7
SYNM-201ENST00000328642 COPS6Q7L5N1 327 aa19.4■□□□□ 0.7
SYNM-201ENST00000328642 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms