RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
LIN28A-202ENST00000326279 FAM98CQ17RN3 349 aaKnown RBP16.29■□□□□ 0.2
LIN28A-202ENST00000326279 AMOTQ4VCS5 1084 aa16.29■□□□□ 0.2
LIN28A-202ENST00000326279 ALKQ9UM73 1620 aa16.29■□□□□ 0.2
LIN28A-202ENST00000326279 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
LIN28A-202ENST00000326279 ATP5J2-PTCD1G3V325 749 aa16.29■□□□□ 0.2
LIN28A-202ENST00000326279 CHMP4AQ9BY43 222 aa16.29■□□□□ 0.2
LIN28A-202ENST00000326279 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
LIN28A-202ENST00000326279 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
LIN28A-202ENST00000326279 IGHDP01880 384 aa16.28■□□□□ 0.2
LIN28A-202ENST00000326279 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
LIN28A-202ENST00000326279 AXIN2Q9Y2T1 843 aa16.28■□□□□ 0.2
LIN28A-202ENST00000326279 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
LIN28A-202ENST00000326279 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
LIN28A-202ENST00000326279 SURF6O75683 361 aaKnown RBP16.28■□□□□ 0.2
LIN28A-202ENST00000326279 GPTP24298 496 aa16.28■□□□□ 0.2
LIN28A-202ENST00000326279 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
LIN28A-202ENST00000326279 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.2
LIN28A-202ENST00000326279 RLBP1P12271 317 aa16.27■□□□□ 0.2
LIN28A-202ENST00000326279 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
LIN28A-202ENST00000326279 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
LIN28A-202ENST00000326279 KCNQ3O43525 872 aa16.26■□□□□ 0.19
LIN28A-202ENST00000326279 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
LIN28A-202ENST00000326279 DDB1Q16531 1140 aa16.26■□□□□ 0.19
LIN28A-202ENST00000326279 NEUROD6Q96NK8 337 aa16.25■□□□□ 0.19
LIN28A-202ENST00000326279 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
LIN28A-202ENST00000326279 IL2RBP14784 551 aa16.25■□□□□ 0.19
LIN28A-202ENST00000326279 ADAMTS13Q76LX8 1427 aa16.25■□□□□ 0.19
LIN28A-202ENST00000326279 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 IL1RAPL2Q9NP60 686 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 SRCIN1Q9C0H9 1055 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
LIN28A-202ENST00000326279 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
LIN28A-202ENST00000326279 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
LIN28A-202ENST00000326279 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
LIN28A-202ENST00000326279 SYNMO15061 1565 aa16.23■□□□□ 0.19
LIN28A-202ENST00000326279 KCNQ4P56696 695 aa16.23■□□□□ 0.19
LIN28A-202ENST00000326279 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
LIN28A-202ENST00000326279 PHF14O94880 888 aa16.23■□□□□ 0.19
LIN28A-202ENST00000326279 USP6P35125 1406 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 FGD1P98174 961 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 FLIIQ13045 1269 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 AGLP35573 1532 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 MYD88Q99836 296 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
LIN28A-202ENST00000326279 G2E3Q7L622 706 aa16.21■□□□□ 0.19
LIN28A-202ENST00000326279 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
LIN28A-202ENST00000326279 SBNO1A3KN83 1393 aa16.21■□□□□ 0.19
LIN28A-202ENST00000326279 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
LIN28A-202ENST00000326279 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
LIN28A-202ENST00000326279 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
LIN28A-202ENST00000326279 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
LIN28A-202ENST00000326279 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
LIN28A-202ENST00000326279 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
LIN28A-202ENST00000326279 RIMS1Q86UR5 1692 aaKnown RBP16.2■□□□□ 0.18
LIN28A-202ENST00000326279 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
LIN28A-202ENST00000326279 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
LIN28A-202ENST00000326279 DEKP35659 375 aaKnown RBP16.19■□□□□ 0.18
LIN28A-202ENST00000326279 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
LIN28A-202ENST00000326279 PRIM1P49642 420 aaKnown RBP16.19■□□□□ 0.18
LIN28A-202ENST00000326279 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
LIN28A-202ENST00000326279 KIF6Q6ZMV9 814 aa16.19■□□□□ 0.18
LIN28A-202ENST00000326279 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
LIN28A-202ENST00000326279 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
LIN28A-202ENST00000326279 VAMP4O75379 141 aa16.19■□□□□ 0.18
LIN28A-202ENST00000326279 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
LIN28A-202ENST00000326279 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
LIN28A-202ENST00000326279 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
LIN28A-202ENST00000326279 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
LIN28A-202ENST00000326279 RICTORQ6R327 1708 aa16.18■□□□□ 0.18
LIN28A-202ENST00000326279 FAM135BQ49AJ0 1406 aa16.18■□□□□ 0.18
LIN28A-202ENST00000326279 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
LIN28A-202ENST00000326279 GNAI2P04899 355 aa16.17■□□□□ 0.18
LIN28A-202ENST00000326279 RNMTO43148 476 aaKnown RBP16.17■□□□□ 0.18
LIN28A-202ENST00000326279 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
LIN28A-202ENST00000326279 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
LIN28A-202ENST00000326279 STARD3NLO95772 234 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 USP21Q9UK80 565 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 GOLGA6L22H0YM25 854 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 MEIS3Q99687 375 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 C22orf23Q9BZE7 217 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 ADGRL3Q9HAR2 1447 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 GNAI3P08754 354 aa16.16■□□□□ 0.18
LIN28A-202ENST00000326279 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
LIN28A-202ENST00000326279 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
LIN28A-202ENST00000326279 RTN4Q9NQC3 1192 aaKnown RBP16.15■□□□□ 0.18
LIN28A-202ENST00000326279 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
LIN28A-202ENST00000326279 A1BGP04217 495 aa16.15■□□□□ 0.18
LIN28A-202ENST00000326279 MCCP23508 829 aa16.15■□□□□ 0.18
LIN28A-202ENST00000326279 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
LIN28A-202ENST00000326279 G3V3G9 751 aa16.15■□□□□ 0.18
LIN28A-202ENST00000326279 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
LIN28A-202ENST00000326279 FOXD4L6Q3SYB3 417 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms