RNA–Protein interactions for RNA: ENST00000326039.3

GRTP1-201, Transcript of growth hormone regulated TBC protein 1, humanhuman

TSL 1 (best) BASIC

Gene GRTP1, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-201ENST00000326039 PTF1AQ7RTS3 328 aa27.93■■■□□ 2.06
GRTP1-201ENST00000326039 FAM208AQ9UK61 1670 aaKnown RBP27.92■■■□□ 2.06
GRTP1-201ENST00000326039 BCL11BQ9C0K0 894 aaPredicted RBP27.92■■■□□ 2.06
GRTP1-201ENST00000326039 MEGF6O75095 1541 aa27.92■■■□□ 2.06
GRTP1-201ENST00000326039 NCAPD2Q15021 1401 aa27.9■■■□□ 2.06
GRTP1-201ENST00000326039 RGPD2P0DJD1 1756 aa27.87■■■□□ 2.05
GRTP1-201ENST00000326039 KCNQ2O43526 872 aa27.87■■■□□ 2.05
GRTP1-201ENST00000326039 IL13P35225 146 aa27.87■■■□□ 2.05
GRTP1-201ENST00000326039 ACSBG1Q96GR2 724 aa27.86■■■□□ 2.05
GRTP1-201ENST00000326039 RREB1Q92766 1687 aa27.86■■■□□ 2.05
GRTP1-201ENST00000326039 IGSF1Q8N6C5 1336 aa27.86■■■□□ 2.05
GRTP1-201ENST00000326039 NUP188Q5SRE5 1749 aa27.85■■■□□ 2.05
GRTP1-201ENST00000326039 LRP5O75197 1615 aa27.84■■■□□ 2.05
GRTP1-201ENST00000326039 SBF2Q86WG5 1849 aa27.83■■■□□ 2.05
GRTP1-201ENST00000326039 PLSCR1O15162 318 aa27.83■■■□□ 2.05
GRTP1-201ENST00000326039 PARD3Q8TEW0 1356 aa27.82■■■□□ 2.04
GRTP1-201ENST00000326039 CYP27B1O15528 508 aa27.81■■■□□ 2.04
GRTP1-201ENST00000326039 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
GRTP1-201ENST00000326039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.81■■■□□ 2.043e-7■□□□□ 8.4
GRTP1-201ENST00000326039 SPG7Q9UQ90 795 aa27.79■■■□□ 2.04
GRTP1-201ENST00000326039 PCDH11XQ9BZA7 1347 aa27.78■■■□□ 2.04
GRTP1-201ENST00000326039 PCDH11YQ9BZA8 1340 aa27.78■■■□□ 2.04
GRTP1-201ENST00000326039 DIAPH1O60610 1272 aaKnown RBP27.77■■■□□ 2.04
GRTP1-201ENST00000326039 PRIM1P49642 420 aaKnown RBP27.77■■■□□ 2.04
GRTP1-201ENST00000326039 SULT6B1Q6IMI4 303 aa27.77■■■□□ 2.04
GRTP1-201ENST00000326039 AEBP1Q8IUX7 1158 aa27.77■■■□□ 2.04
GRTP1-201ENST00000326039 PPP2R1AP30153 589 aa27.76■■■□□ 2.03
GRTP1-201ENST00000326039 PROM2Q8N271 834 aa27.76■■■□□ 2.03
GRTP1-201ENST00000326039 NKX1-1Q15270 411 aaPredicted RBP27.74■■■□□ 2.03
GRTP1-201ENST00000326039 PLEKHG2Q9H7P9 1386 aa27.72■■■□□ 2.03
GRTP1-201ENST00000326039 PLEKHO1Q53GL0 409 aaPredicted RBP27.71■■■□□ 2.03
GRTP1-201ENST00000326039 SYTL4Q96C24 671 aaPredicted RBP27.71■■■□□ 2.03
GRTP1-201ENST00000326039 KDRP35968 1356 aa27.71■■■□□ 2.03
GRTP1-201ENST00000326039 PHKG2P15735 406 aa27.7■■■□□ 2.02
GRTP1-201ENST00000326039 NBPF14Q5TI25 921 aa27.7■■■□□ 2.02
GRTP1-201ENST00000326039 IFNL2Q8IZJ0 200 aa27.7■■■□□ 2.02
GRTP1-201ENST00000326039 ANO8Q9HCE9 1232 aaPredicted RBP27.7■■■□□ 2.02
GRTP1-201ENST00000326039 AMOTQ4VCS5 1084 aa27.69■■■□□ 2.02
GRTP1-201ENST00000326039 HMOX1P09601 288 aa27.68■■■□□ 2.02
GRTP1-201ENST00000326039 TXNRD1Q16881 649 aa27.68■■■□□ 2.02
GRTP1-201ENST00000326039 CFAP53Q96M91 514 aa27.67■■■□□ 2.02
GRTP1-201ENST00000326039 RGPD3A6NKT7 1758 aaPredicted RBP27.67■■■□□ 2.02
GRTP1-201ENST00000326039 RGPD4Q7Z3J3 1758 aa27.67■■■□□ 2.02
GRTP1-201ENST00000326039 SHANK3Q9BYB0 1731 aa27.67■■■□□ 2.02
GRTP1-201ENST00000326039 COL3A1P02461 1466 aaPredicted RBP27.66■■■□□ 2.02
GRTP1-201ENST00000326039 U2SURPO15042 1029 aaKnown RBP27.64■■■□□ 2.02
GRTP1-201ENST00000326039 NHSQ6T4R5 1651 aa27.64■■■□□ 2.02
GRTP1-201ENST00000326039 ZNF530Q6P9A1 599 aaPredicted RBP27.63■■■□□ 2.01
GRTP1-201ENST00000326039 PDGFDQ9GZP0 370 aaPredicted RBP27.63■■■□□ 2.01
GRTP1-201ENST00000326039 RALBP1Q15311 655 aa27.62■■■□□ 2.01
GRTP1-201ENST00000326039 MPRIPQ6WCQ1 1025 aa27.62■■■□□ 2.01
GRTP1-201ENST00000326039 PKD1L3Q7Z443 1732 aa27.61■■■□□ 2.01
GRTP1-201ENST00000326039 ZNF316A6NFI3 1004 aaPredicted RBP27.6■■■□□ 2.01
GRTP1-201ENST00000326039 PIGBQ92521 554 aa27.6■■■□□ 2.01
GRTP1-201ENST00000326039 HSP90AB1P08238 724 aaKnown RBP27.59■■■□□ 2.01
GRTP1-201ENST00000326039 DCAF5Q96JK2 942 aa27.59■■■□□ 2.01
GRTP1-201ENST00000326039 LRRC4BQ9NT99 713 aa27.59■■■□□ 2.01
GRTP1-201ENST00000326039 NUDCQ9Y266 331 aa27.59■■■□□ 2.01
GRTP1-201ENST00000326039 C1orf141Q5JVX7 400 aa27.57■■■□□ 2
GRTP1-201ENST00000326039 SLC27A3Q5K4L6 730 aa27.56■■■□□ 2
GRTP1-201ENST00000326039 BTAF1O14981 1849 aa27.55■■■□□ 2
GRTP1-201ENST00000326039 ERVV-2B6SEH9 535 aa27.55■■■□□ 2
GRTP1-201ENST00000326039 MTHFSDQ2M296 383 aaKnown RBP27.55■■■□□ 2
GRTP1-201ENST00000326039 AKAP4Q5JQC9 854 aa27.54■■■□□ 2
GRTP1-201ENST00000326039 KAT6BQ8WYB5 2073 aa27.53■■■□□ 2
GRTP1-201ENST00000326039 CASZ1Q86V15 1759 aa27.53■■■□□ 2
GRTP1-201ENST00000326039 U2AF1L5P0DN76 240 aaPredicted RBP27.53■■■□□ 2
GRTP1-201ENST00000326039 U2AF1Q01081 240 aaKnown RBP eCLIP27.53■■■□□ 2
GRTP1-201ENST00000326039 TMOD3Q9NYL9 352 aa27.53■■■□□ 2
GRTP1-201ENST00000326039 KCNQ4P56696 695 aa27.52■■■□□ 2
GRTP1-201ENST00000326039 RSPH6AQ9H0K4 717 aa27.52■■■□□ 2
GRTP1-201ENST00000326039 DOT1LQ8TEK3 1739 aa27.52■■■□□ 2
GRTP1-201ENST00000326039 SLC15A2Q16348 729 aa27.51■■□□□ 1.99
GRTP1-201ENST00000326039 SMARCC1Q92922 1105 aaPredicted RBP27.51■■□□□ 1.99
GRTP1-201ENST00000326039 SPON1Q9HCB6 807 aa27.51■■□□□ 1.99
GRTP1-201ENST00000326039 FCHSD2O94868 740 aa27.5■■□□□ 1.99
GRTP1-201ENST00000326039 ZBTB7AO95365 584 aa27.5■■□□□ 1.99
GRTP1-201ENST00000326039 PHACTR3Q96KR7 559 aa27.5■■□□□ 1.99
GRTP1-201ENST00000326039 STK32BQ9NY57 414 aa27.5■■□□□ 1.99
GRTP1-201ENST00000326039 ASAP1Q9ULH1 1129 aa27.5■■□□□ 1.99
GRTP1-201ENST00000326039 PRKAR2BP31323 418 aa27.49■■□□□ 1.99
GRTP1-201ENST00000326039 LGR6Q9HBX8 967 aa27.49■■□□□ 1.99
GRTP1-201ENST00000326039 CCNL1Q9UK58 526 aaPredicted RBP27.49■■□□□ 1.99
GRTP1-201ENST00000326039 KDM6AO15550 1401 aaPredicted RBP27.49■■□□□ 1.99
GRTP1-201ENST00000326039 PRKRIP1Q9H875 184 aaPredicted RBP27.48■■□□□ 1.99
GRTP1-201ENST00000326039 ATG3Q9NT62 314 aa27.48■■□□□ 1.99
GRTP1-201ENST00000326039 MYBBP1AQ9BQG0 1328 aaKnown RBP27.47■■□□□ 1.99
GRTP1-201ENST00000326039 CABP4P57796 275 aa27.47■■□□□ 1.99
GRTP1-201ENST00000326039 PALLDQ8WX93 1383 aa27.47■■□□□ 1.99
GRTP1-201ENST00000326039 NFATC2IPQ8NCF5 419 aa27.46■■□□□ 1.99
GRTP1-201ENST00000326039 AKT1S1Q96B36 256 aa27.46■■□□□ 1.99
GRTP1-201ENST00000326039 PPP1R1BQ9UD71 204 aaPredicted RBP27.46■■□□□ 1.99
GRTP1-201ENST00000326039 PAPPAQ13219 1627 aa27.45■■□□□ 1.99
GRTP1-201ENST00000326039 TOGARAM1Q9Y4F4 1720 aa27.45■■□□□ 1.99
GRTP1-201ENST00000326039 RNMTO43148 476 aaKnown RBP27.45■■□□□ 1.98
GRTP1-201ENST00000326039 ATF5Q9Y2D1 282 aaPredicted RBP27.45■■□□□ 1.98
GRTP1-201ENST00000326039 ZNF827Q17R98 1081 aa27.44■■□□□ 1.98
GRTP1-201ENST00000326039 GAS2L2Q8NHY3 880 aa27.44■■□□□ 1.98
GRTP1-201ENST00000326039 LOC102724428A0A0B4J2F2 783 aa27.41■■□□□ 1.98
GRTP1-201ENST00000326039 SIK1P57059 783 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms