RNA–Protein interactions for RNA: ENST00000324866.11

LRTOMT-203, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-203ENST00000324866 HOXC9P31274 260 aa11.43□□□□□ -0.58
LRTOMT-203ENST00000324866 AMPHP49418 695 aa11.43□□□□□ -0.58
LRTOMT-203ENST00000324866 INTS3Q68E01 1043 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-203ENST00000324866 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
LRTOMT-203ENST00000324866 BABAM1Q9NWV8 329 aa11.43□□□□□ -0.58
LRTOMT-203ENST00000324866 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
LRTOMT-203ENST00000324866 LTN1O94822 1766 aa11.42□□□□□ -0.58
LRTOMT-203ENST00000324866 RGS12O14924 1447 aa11.42□□□□□ -0.58
LRTOMT-203ENST00000324866 NLRP6P59044 892 aa11.42□□□□□ -0.58
LRTOMT-203ENST00000324866 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
LRTOMT-203ENST00000324866 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
LRTOMT-203ENST00000324866 PTPRCP08575 1304 aa11.42□□□□□ -0.58
LRTOMT-203ENST00000324866 HSPA2P54652 639 aa11.41□□□□□ -0.58
LRTOMT-203ENST00000324866 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
LRTOMT-203ENST00000324866 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
LRTOMT-203ENST00000324866 MST1RQ04912 1400 aa11.4□□□□□ -0.58
LRTOMT-203ENST00000324866 SLIT3O75094 1523 aa11.4□□□□□ -0.58
LRTOMT-203ENST00000324866 KIF1AQ12756 1690 aa11.4□□□□□ -0.58
LRTOMT-203ENST00000324866 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
LRTOMT-203ENST00000324866 MCM10Q7L590 875 aa11.39□□□□□ -0.59
LRTOMT-203ENST00000324866 TBC1D32Q96NH3 1257 aa11.39□□□□□ -0.59
LRTOMT-203ENST00000324866 SEC24BO95487 1268 aa11.39□□□□□ -0.59
LRTOMT-203ENST00000324866 RTF1Q92541 710 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-203ENST00000324866 UPF2Q9HAU5 1272 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-203ENST00000324866 NCAPD2Q15021 1401 aa11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 ABTB2Q8N961 1025 aa11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 IP6K1Q92551 441 aa11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 TRPM3Q9HCF6 1732 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 FAM208AQ9UK61 1670 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
LRTOMT-203ENST00000324866 KCNH5Q8NCM2 988 aa11.37□□□□□ -0.59
LRTOMT-203ENST00000324866 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
LRTOMT-203ENST00000324866 MSH6P52701 1360 aa11.37□□□□□ -0.59
LRTOMT-203ENST00000324866 MAP3K5Q99683 1374 aa11.37□□□□□ -0.59
LRTOMT-203ENST00000324866 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
LRTOMT-203ENST00000324866 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
LRTOMT-203ENST00000324866 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 ATP10DQ9P241 1426 aa11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 SOX12O15370 315 aa11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 FOXO3O43524 673 aa11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 BECN1Q14457 450 aa11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 BMP2KLQ5H9B9 411 aa11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 RPAP2Q8IXW5 612 aaPredicted RBP11.36□□□□□ -0.59
LRTOMT-203ENST00000324866 TSPYL4Q9UJ04 414 aa11.35□□□□□ -0.59
LRTOMT-203ENST00000324866 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
LRTOMT-203ENST00000324866 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
LRTOMT-203ENST00000324866 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
LRTOMT-203ENST00000324866 DCTPP1Q9H773 170 aa11.35□□□□□ -0.59
LRTOMT-203ENST00000324866 CEMIPQ8WUJ3 1361 aa11.34□□□□□ -0.59
LRTOMT-203ENST00000324866 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
LRTOMT-203ENST00000324866 PXDNLA1KZ92 1463 aa11.34□□□□□ -0.59
LRTOMT-203ENST00000324866 OVOS2A0A0G2JMS6 1433 aa11.34□□□□□ -0.59
LRTOMT-203ENST00000324866 KRT24Q2M2I5 525 aa11.34□□□□□ -0.59
LRTOMT-203ENST00000324866 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
LRTOMT-203ENST00000324866 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
LRTOMT-203ENST00000324866 NBR1Q14596 966 aa11.33□□□□□ -0.6
LRTOMT-203ENST00000324866 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
LRTOMT-203ENST00000324866 PSME1Q06323 249 aa11.33□□□□□ -0.6
LRTOMT-203ENST00000324866 TAF7Q15545 349 aaPredicted RBP11.32□□□□□ -0.6
LRTOMT-203ENST00000324866 ESCO1Q5FWF5 840 aa11.32□□□□□ -0.6
LRTOMT-203ENST00000324866 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
LRTOMT-203ENST00000324866 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
LRTOMT-203ENST00000324866 DCCP43146 1447 aa11.32□□□□□ -0.6
LRTOMT-203ENST00000324866 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 ANKRD45Q5TZF3 282 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 NUTM2GQ5VZR2 741 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 ABCC6O95255 1503 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 HOXB7P09629 217 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 C1orf167Q5SNV9 1468 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 PLEKHG2Q9H7P9 1386 aa11.31□□□□□ -0.6
LRTOMT-203ENST00000324866 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
LRTOMT-203ENST00000324866 RBM25P49756 843 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-203ENST00000324866 ARHGEF25Q86VW2 580 aa11.3□□□□□ -0.6
LRTOMT-203ENST00000324866 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
LRTOMT-203ENST00000324866 ARXQ96QS3 562 aa11.3□□□□□ -0.6
LRTOMT-203ENST00000324866 STK31Q9BXU1 1019 aa11.3□□□□□ -0.6
LRTOMT-203ENST00000324866 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
LRTOMT-203ENST00000324866 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
LRTOMT-203ENST00000324866 MIS18AQ9NYP9 233 aa11.29□□□□□ -0.6
LRTOMT-203ENST00000324866 AMOTQ4VCS5 1084 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 HMMRO75330 724 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 GCP02774 474 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 G2E3Q7L622 706 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
LRTOMT-203ENST00000324866 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.6
LRTOMT-203ENST00000324866 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.6
LRTOMT-203ENST00000324866 ORAI2Q96SN7 254 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms