RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 RAB3GAP1Q15042 981 aa22.34■■□□□ 1.17
TRAPPC12-201ENST00000324266 ARID3AQ99856 593 aa22.34■■□□□ 1.17
TRAPPC12-201ENST00000324266 RIMS1Q86UR5 1692 aaKnown RBP22.34■■□□□ 1.17
TRAPPC12-201ENST00000324266 ZNF853P0CG23 659 aa22.34■■□□□ 1.17
TRAPPC12-201ENST00000324266 ZSCAN30Q86W11 494 aa22.33■■□□□ 1.17
TRAPPC12-201ENST00000324266 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
TRAPPC12-201ENST00000324266 RRS1Q15050 365 aaKnown RBP22.32■■□□□ 1.16
TRAPPC12-201ENST00000324266 GAS2L3Q86XJ1 694 aa22.32■■□□□ 1.16
TRAPPC12-201ENST00000324266 K7ELQ4 463 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 GBP4Q96PP9 640 aa22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 GSPT1P15170 499 aaKnown RBP22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 R3HCC1Q9Y3T6 440 aaKnown RBP22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 ADAMTSL3P82987 1691 aa22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 NCKAP5LQ9HCH0 1330 aa22.31■■□□□ 1.16
TRAPPC12-201ENST00000324266 GAS2L2Q8NHY3 880 aa22.3■■□□□ 1.16
TRAPPC12-201ENST00000324266 ANP32BQ92688 251 aaKnown RBP22.29■■□□□ 1.16
TRAPPC12-201ENST00000324266 CFAP44Q96MT7 982 aa22.29■■□□□ 1.16
TRAPPC12-201ENST00000324266 UQCRHLA0A096LP55 91 aa22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 CDC45O75419 566 aa22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 UQCRHP07919 91 aa22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 SSFA2P28290 1259 aa22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 ATP7BP35670 1465 aa22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 KIF20AO95235 890 aa22.28■■□□□ 1.16
TRAPPC12-201ENST00000324266 PLEKHM2Q8IWE5 1019 aa22.27■■□□□ 1.16
TRAPPC12-201ENST00000324266 API5Q9BZZ5 524 aaKnown RBP22.27■■□□□ 1.16
TRAPPC12-201ENST00000324266 CCDC94Q9BW85 323 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC12-201ENST00000324266 KRT24Q2M2I5 525 aa22.26■■□□□ 1.15
TRAPPC12-201ENST00000324266 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
TRAPPC12-201ENST00000324266 DYNC1I1O14576 645 aa22.26■■□□□ 1.15
TRAPPC12-201ENST00000324266 MSNP26038 577 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-201ENST00000324266 ZNF830Q96NB3 372 aaPredicted RBP22.26■■□□□ 1.15
TRAPPC12-201ENST00000324266 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
TRAPPC12-201ENST00000324266 CCDC173Q0VFZ6 552 aa22.25■■□□□ 1.15
TRAPPC12-201ENST00000324266 TMEM2Q9UHN6 1383 aa22.24■■□□□ 1.15
TRAPPC12-201ENST00000324266 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
TRAPPC12-201ENST00000324266 OTUD7AQ8TE49 926 aaPredicted RBP22.24■■□□□ 1.15
TRAPPC12-201ENST00000324266 GTPBP4Q9BZE4 634 aaKnown RBP22.24■■□□□ 1.15
TRAPPC12-201ENST00000324266 WASLO00401 505 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 COG3Q96JB2 828 aa22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 EDC4Q6P2E9 1401 aaKnown RBP22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 APBB1O00213 710 aa22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 LMOD3Q0VAK6 560 aa22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 PPP1R9BQ96SB3 815 aa22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 DCTPP1Q9H773 170 aa22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 AK9Q5TCS8 1911 aa22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 CDK12Q9NYV4 1490 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC12-201ENST00000324266 TXNDC2Q86VQ3 553 aa22.22■■□□□ 1.15
TRAPPC12-201ENST00000324266 AEBP1Q8IUX7 1158 aa22.22■■□□□ 1.15
TRAPPC12-201ENST00000324266 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
TRAPPC12-201ENST00000324266 VGLL3A8MV65 326 aa22.21■■□□□ 1.15
TRAPPC12-201ENST00000324266 SKOR2Q2VWA4 1001 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC12-201ENST00000324266 LTKP29376 864 aa22.21■■□□□ 1.15
TRAPPC12-201ENST00000324266 TTC22Q5TAA0 569 aa22.21■■□□□ 1.15
TRAPPC12-201ENST00000324266 LETM1O95202 739 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC12-201ENST00000324266 NUDT16Q96DE0 195 aaKnown RBP22.2■■□□□ 1.14
TRAPPC12-201ENST00000324266 CPS1P31327 1500 aa22.2■■□□□ 1.14
TRAPPC12-201ENST00000324266 SMARCA5O60264 1052 aaPredicted RBP22.19■■□□□ 1.14
TRAPPC12-201ENST00000324266 DLC1Q96QB1 1528 aa22.19■■□□□ 1.14
TRAPPC12-201ENST00000324266 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
TRAPPC12-201ENST00000324266 KLHL34Q8N239 644 aa22.19■■□□□ 1.14
TRAPPC12-201ENST00000324266 PLCD3Q8N3E9 789 aa22.19■■□□□ 1.14
TRAPPC12-201ENST00000324266 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
TRAPPC12-201ENST00000324266 BAG4O95429 457 aaKnown RBP22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 INTS3Q68E01 1043 aaKnown RBP22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 MCM10Q7L590 875 aa22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 SULT6B1Q6IMI4 303 aa22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 THEMISQ8N1K5 641 aaPredicted RBP22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 ANKRD44Q8N8A2 993 aa22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 USP26Q9BXU7 913 aa22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 METP08581 1390 aa22.17■■□□□ 1.14
TRAPPC12-201ENST00000324266 RABEP1Q15276 862 aa22.16■■□□□ 1.14
TRAPPC12-201ENST00000324266 CEP85Q6P2H3 762 aa22.15■■□□□ 1.14
TRAPPC12-201ENST00000324266 DDX49Q9Y6V7 483 aaKnown RBP22.15■■□□□ 1.14
TRAPPC12-201ENST00000324266 ATP10DQ9P241 1426 aa22.15■■□□□ 1.14
TRAPPC12-201ENST00000324266 GOLGA6L22H0YM25 854 aa22.15■■□□□ 1.14
TRAPPC12-201ENST00000324266 SDSP20132 328 aa22.14■■□□□ 1.14
TRAPPC12-201ENST00000324266 PTMSP20962 102 aa22.14■■□□□ 1.14
TRAPPC12-201ENST00000324266 PKP1Q13835 747 aa22.14■■□□□ 1.14
TRAPPC12-201ENST00000324266 CCDC61Q9Y6R9 512 aa22.14■■□□□ 1.14
TRAPPC12-201ENST00000324266 RGS12O14924 1447 aa22.14■■□□□ 1.13
TRAPPC12-201ENST00000324266 EIF4A2Q14240 407 aaKnown RBP22.14■■□□□ 1.13
TRAPPC12-201ENST00000324266 MEIS3Q99687 375 aa22.14■■□□□ 1.13
TRAPPC12-201ENST00000324266 EID1Q9Y6B2 187 aa22.14■■□□□ 1.13
TRAPPC12-201ENST00000324266 SETD1AO15047 1707 aaKnown RBP22.14■■□□□ 1.13
TRAPPC12-201ENST00000324266 MSH6P52701 1360 aa22.13■■□□□ 1.13
TRAPPC12-201ENST00000324266 KIF24Q5T7B8 1368 aa22.13■■□□□ 1.13
TRAPPC12-201ENST00000324266 ZNF500O60304 480 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC12-201ENST00000324266 MCTP1Q6DN14 999 aa22.13■■□□□ 1.13
TRAPPC12-201ENST00000324266 CEP170BQ9Y4F5 1589 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC12-201ENST00000324266 CLEC17AQ6ZS10 378 aa22.12■■□□□ 1.13
TRAPPC12-201ENST00000324266 NRXN3Q9Y4C0 1643 aa22.12■■□□□ 1.13
TRAPPC12-201ENST00000324266 KLHL40Q2TBA0 621 aa22.11■■□□□ 1.13
TRAPPC12-201ENST00000324266 TAF3Q5VWG9 929 aa22.11■■□□□ 1.13
TRAPPC12-201ENST00000324266 RPAP2Q8IXW5 612 aaPredicted RBP22.11■■□□□ 1.13
TRAPPC12-201ENST00000324266 MIS18AQ9NYP9 233 aa22.11■■□□□ 1.13
TRAPPC12-201ENST00000324266 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
TRAPPC12-201ENST00000324266 CHL1O00533 1208 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms