RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 PIP4K2AP48426 406 aaPredicted RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 SASS6Q6UVJ0 657 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 HYPKQ9NX55 129 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 ANKIB1Q9P2G1 1089 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 ABCC5O15440 1437 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 NUP160Q12769 1436 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 IFIT5Q13325 482 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 FOXD4L6Q3SYB3 417 aaPredicted RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 FOXD4L3Q6VB84 417 aaPredicted RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 CDC5LQ99459 802 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 CDKL5O76039 1030 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 KRT18P05783 430 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 RFC4P35249 363 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 TMPOP42166 694 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 NME9Q86XW9 330 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 DBF4Q9UBU7 674 aaPredicted RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 TRMT112Q9UI30 125 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 NOB1Q9ULX3 412 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 RDXP35241 583 aaKnown RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 PPP1R42Q7Z4L9 355 aa10.68□□□□□ -0.7
CD28-201ENST00000324106 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
CD28-201ENST00000324106 CCDC69A6NI79 296 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 KRT32Q14532 448 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 SDF4Q9BRK5 362 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 C22orf23Q9BZE7 217 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 ABCF2Q9UG63 623 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 DUSP27Q5VZP5 1158 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
CD28-201ENST00000324106 MAPKBP1O60336 1514 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 LDHCP07864 332 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 AACSQ86V21 672 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 IFT57Q9NWB7 429 aa10.67□□□□□ -0.7
CD28-201ENST00000324106 A2MP01023 1474 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 AIDAQ96BJ3 306 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 MAP3K1Q13233 1512 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 DDX46Q7L014 1031 aaKnown RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 ZNF396Q96N95 335 aaPredicted RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 GLI2P10070 1586 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 IDH1O75874 414 aaKnown RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 POLD1P28340 1107 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 TTLL12Q14166 644 aaPredicted RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 DZIP1Q86YF9 867 aaKnown RBP10.66□□□□□ -0.7
CD28-201ENST00000324106 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
CD28-201ENST00000324106 ST5P78524 1137 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 ANKRD18BA2A2Z9 1011 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 SLC5A1P13866 664 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 DDB1Q16531 1140 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 PAF1Q8N7H5 531 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 PDIA4P13667 645 aaKnown RBP10.65□□□□□ -0.7
CD28-201ENST00000324106 ANKRD24Q8TF21 1146 aa10.65□□□□□ -0.7
CD28-201ENST00000324106 ACEP12821 1306 aa10.65□□□□□ -0.71
CD28-201ENST00000324106 NOS1P29475 1434 aa10.65□□□□□ -0.71
CD28-201ENST00000324106 KIF1BPQ96EK5 621 aa10.65□□□□□ -0.71
CD28-201ENST00000324106 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.71
CD28-201ENST00000324106 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 USP5P45974 858 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 MAP3K12Q12852 859 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 C8orf37Q96NL8 207 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 RABEP1Q15276 862 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 WASF1Q92558 559 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 ABCC10Q5T3U5 1492 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 POLR3DP05423 398 aaPredicted RBP10.64□□□□□ -0.71
CD28-201ENST00000324106 TNIP1Q15025 636 aa10.64□□□□□ -0.71
CD28-201ENST00000324106 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
CD28-201ENST00000324106 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
CD28-201ENST00000324106 MYO1BO43795 1136 aa10.63□□□□□ -0.71
CD28-201ENST00000324106 KINO60870 393 aaKnown RBP10.63□□□□□ -0.71
CD28-201ENST00000324106 SNRPA1P09661 255 aaKnown RBP10.63□□□□□ -0.71
CD28-201ENST00000324106 NEK4P51957 841 aa10.63□□□□□ -0.71
CD28-201ENST00000324106 CCDC173Q0VFZ6 552 aa10.63□□□□□ -0.71
CD28-201ENST00000324106 GLRX3O76003 335 aaKnown RBP10.63□□□□□ -0.71
CD28-201ENST00000324106 FOSBP53539 338 aa10.63□□□□□ -0.71
CD28-201ENST00000324106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
CD28-201ENST00000324106 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 ZNF76P36508 570 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 STK38Q15208 465 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 SYCP1Q15431 976 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 IMMTQ16891 758 aaKnown RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 MYD88Q99836 296 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 DNAI2Q9GZS0 605 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 MKNK2Q9HBH9 465 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 TRIM21P19474 475 aaKnown RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 STIM1Q13586 685 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 ALDH1L2Q3SY69 923 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms