RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 C5P01031 1676 aa10.22□□□□□ -0.77
CSTF3-201ENST00000323959 KDM6AO15550 1401 aaPredicted RBP10.22□□□□□ -0.77
CSTF3-201ENST00000323959 LTBP1Q14766 1721 aa10.22□□□□□ -0.77
CSTF3-201ENST00000323959 NUP155O75694 1391 aa10.21□□□□□ -0.77
CSTF3-201ENST00000323959 RNF181Q9P0P0 153 aa10.21□□□□□ -0.78
CSTF3-201ENST00000323959 BCS1LQ9Y276 419 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 PPIP5K1Q6PFW1 1433 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 N4BP2Q86UW6 1770 aaPredicted RBP10.2□□□□□ -0.78
CSTF3-201ENST00000323959 RASSF10A6NK89 507 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 CA12O43570 354 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
CSTF3-201ENST00000323959 FXR1P51114 621 aaKnown RBP eCLIP10.2□□□□□ -0.78
CSTF3-201ENST00000323959 SLC17A8Q8NDX2 589 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 SLIT3O75094 1523 aa10.2□□□□□ -0.78
CSTF3-201ENST00000323959 PASKQ96RG2 1323 aa10.19□□□□□ -0.78
CSTF3-201ENST00000323959 GLTPD2A6NH11 291 aa10.19□□□□□ -0.78
CSTF3-201ENST00000323959 ACSBG1Q96GR2 724 aa10.19□□□□□ -0.78
CSTF3-201ENST00000323959 PRR36Q9H6K5 1346 aa10.19□□□□□ -0.78
CSTF3-201ENST00000323959 TIAM2Q8IVF5 1701 aa10.18□□□□□ -0.78
CSTF3-201ENST00000323959 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
CSTF3-201ENST00000323959 FCHSD2O94868 740 aa10.17□□□□□ -0.78
CSTF3-201ENST00000323959 DGKZQ13574 1117 aa10.17□□□□□ -0.78
CSTF3-201ENST00000323959 DCAF5Q96JK2 942 aa10.17□□□□□ -0.78
CSTF3-201ENST00000323959 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
CSTF3-201ENST00000323959 WDR33Q9C0J8 1336 aaKnown RBP10.16□□□□□ -0.78
CSTF3-201ENST00000323959 PIK3C2GO75747 1445 aa10.16□□□□□ -0.78
CSTF3-201ENST00000323959 POLR3AO14802 1390 aaPredicted RBP10.16□□□□□ -0.78
CSTF3-201ENST00000323959 GCP02774 474 aa10.15□□□□□ -0.78
CSTF3-201ENST00000323959 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
CSTF3-201ENST00000323959 SOX10P56693 466 aa10.14□□□□□ -0.79
CSTF3-201ENST00000323959 CCNL1Q9UK58 526 aaPredicted RBP10.14□□□□□ -0.79
CSTF3-201ENST00000323959 TAF1LQ8IZX4 1826 aa10.14□□□□□ -0.79
CSTF3-201ENST00000323959 TOGARAM1Q9Y4F4 1720 aa10.14□□□□□ -0.79
CSTF3-201ENST00000323959 DEFB115Q30KQ5 88 aa10.14□□□□□ -0.79
CSTF3-201ENST00000323959 MEGF6O75095 1541 aa10.13□□□□□ -0.79
CSTF3-201ENST00000323959 ECE1P42892 770 aa10.13□□□□□ -0.79
CSTF3-201ENST00000323959 UBR3Q6ZT12 1888 aa10.12□□□□□ -0.79
CSTF3-201ENST00000323959 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
CSTF3-201ENST00000323959 DOT1LQ8TEK3 1739 aa10.11□□□□□ -0.79
CSTF3-201ENST00000323959 CPSF1Q10570 1443 aaKnown RBP10.11□□□□□ -0.79
CSTF3-201ENST00000323959 C4BP0C0L5 1744 aa10.11□□□□□ -0.79
CSTF3-201ENST00000323959 PRAM1Q96QH2 718 aa10.11□□□□□ -0.79
CSTF3-201ENST00000323959 ADGRF5Q8IZF2 1346 aa10.11□□□□□ -0.79
CSTF3-201ENST00000323959 NSD2O96028 1365 aa10.1□□□□□ -0.79
CSTF3-201ENST00000323959 POTECB2RU33 542 aa10.1□□□□□ -0.79
CSTF3-201ENST00000323959 LDHDQ86WU2 507 aa10.1□□□□□ -0.79
CSTF3-201ENST00000323959 NUTM2GQ5VZR2 741 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 TMEM132EQ6IEE7 984 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 C4AP0C0L4 1744 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
CSTF3-201ENST00000323959 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 DPEP1P16444 411 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 LMNB1P20700 586 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 MPNDQ8N594 471 aa10.09□□□□□ -0.79
CSTF3-201ENST00000323959 DALRD3Q5D0E6 543 aaKnown RBP10.08□□□□□ -0.8
CSTF3-201ENST00000323959 CCDC87Q9NVE4 849 aa10.08□□□□□ -0.8
CSTF3-201ENST00000323959 PIM2Q9P1W9 311 aa10.08□□□□□ -0.8
CSTF3-201ENST00000323959 POGKQ9P215 609 aa10.08□□□□□ -0.8
CSTF3-201ENST00000323959 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
CSTF3-201ENST00000323959 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
CSTF3-201ENST00000323959 MAP2K2P36507 400 aa10.08□□□□□ -0.8
CSTF3-201ENST00000323959 RGPD5Q99666 1765 aa10.08□□□□□ -0.8
CSTF3-201ENST00000323959 SSFA2P28290 1259 aa10.07□□□□□ -0.8
CSTF3-201ENST00000323959 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
CSTF3-201ENST00000323959 SCN4AP35499 1836 aa10.07□□□□□ -0.8
CSTF3-201ENST00000323959 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
CSTF3-201ENST00000323959 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
CSTF3-201ENST00000323959 IL2RBP14784 551 aa10.06□□□□□ -0.8
CSTF3-201ENST00000323959 KANK4Q5T7N3 995 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-201ENST00000323959 C14orf93Q9H972 538 aaKnown RBP10.05□□□□□ -0.8
CSTF3-201ENST00000323959 ADAMTSL1Q8N6G6 1762 aa10.05□□□□□ -0.8
CSTF3-201ENST00000323959 USP47Q96K76 1375 aa10.05□□□□□ -0.8
CSTF3-201ENST00000323959 DICER1Q9UPY3 1922 aaKnown RBP10.05□□□□□ -0.8
CSTF3-201ENST00000323959 KCNQ4P56696 695 aa10.04□□□□□ -0.8
CSTF3-201ENST00000323959 CAPNS2Q96L46 248 aa10.04□□□□□ -0.8
CSTF3-201ENST00000323959 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
CSTF3-201ENST00000323959 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
CSTF3-201ENST00000323959 AK7Q96M32 723 aa10.04□□□□□ -0.8
CSTF3-201ENST00000323959 KCNA3P22001 575 aa10.03□□□□□ -0.8
CSTF3-201ENST00000323959 ERBB3P21860 1342 aa10.03□□□□□ -0.8
CSTF3-201ENST00000323959 MMP10P09238 476 aa10.03□□□□□ -0.8
CSTF3-201ENST00000323959 CASP8AP2Q9UKL3 1982 aa10.02□□□□□ -0.8
CSTF3-201ENST00000323959 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.81
CSTF3-201ENST00000323959 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-201ENST00000323959 NUDT16Q96DE0 195 aaKnown RBP10.02□□□□□ -0.81
CSTF3-201ENST00000323959 ACEP12821 1306 aa10.02□□□□□ -0.81
CSTF3-201ENST00000323959 GPR101Q96P66 508 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-201ENST00000323959 AXIN2Q9Y2T1 843 aa10.02□□□□□ -0.81
CSTF3-201ENST00000323959 ZBTB7CA1YPR0 619 aa10.01□□□□□ -0.81
CSTF3-201ENST00000323959 FAM208AQ9UK61 1670 aaKnown RBP10.01□□□□□ -0.81
CSTF3-201ENST00000323959 ARHGEF25Q86VW2 580 aa10.01□□□□□ -0.81
CSTF3-201ENST00000323959 SAFB2Q14151 953 aaKnown RBP eCLIP10□□□□□ -0.81
CSTF3-201ENST00000323959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
CSTF3-201ENST00000323959 PRIM1P49642 420 aaKnown RBP10□□□□□ -0.81
CSTF3-201ENST00000323959 ABT1Q9ULW3 272 aaKnown RBP10□□□□□ -0.81
CSTF3-201ENST00000323959 KAT6BQ8WYB5 2073 aa9.99□□□□□ -0.81
CSTF3-201ENST00000323959 CCDC88AQ3V6T2 1871 aa9.99□□□□□ -0.81
CSTF3-201ENST00000323959 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
CSTF3-201ENST00000323959 NLGN1Q8N2Q7 840 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms