RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 MAP3K4Q9Y6R4 1608 aa16.72■□□□□ 0.27
SRRM1-201ENST00000323848 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
SRRM1-201ENST00000323848 NEUROD6Q96NK8 337 aa16.72■□□□□ 0.27
SRRM1-201ENST00000323848 MYOM2P54296 1465 aa16.72■□□□□ 0.27
SRRM1-201ENST00000323848 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
SRRM1-201ENST00000323848 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
SRRM1-201ENST00000323848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.71■□□□□ 0.27
SRRM1-201ENST00000323848 GCP02774 474 aa16.71■□□□□ 0.27
SRRM1-201ENST00000323848 HOXC9P31274 260 aa16.71■□□□□ 0.27
SRRM1-201ENST00000323848 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
SRRM1-201ENST00000323848 ZBTB40Q9NUA8 1239 aa16.71■□□□□ 0.27
SRRM1-201ENST00000323848 CDC45O75419 566 aa16.71■□□□□ 0.27
SRRM1-201ENST00000323848 GSE1Q14687 1217 aa16.71■□□□□ 0.27
SRRM1-201ENST00000323848 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
SRRM1-201ENST00000323848 PIP4K2BP78356 416 aa16.71■□□□□ 0.26
SRRM1-201ENST00000323848 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.26
SRRM1-201ENST00000323848 CHPF2Q9P2E5 772 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 KCNQ3O43525 872 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 GNAI3P08754 354 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
SRRM1-201ENST00000323848 NEK4P51957 841 aa16.69■□□□□ 0.26
SRRM1-201ENST00000323848 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
SRRM1-201ENST00000323848 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
SRRM1-201ENST00000323848 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
SRRM1-201ENST00000323848 CABP4P57796 275 aa16.68■□□□□ 0.26
SRRM1-201ENST00000323848 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
SRRM1-201ENST00000323848 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
SRRM1-201ENST00000323848 FOSBP53539 338 aa16.67■□□□□ 0.26
SRRM1-201ENST00000323848 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
SRRM1-201ENST00000323848 BRPF3Q9ULD4 1205 aa16.67■□□□□ 0.26
SRRM1-201ENST00000323848 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
SRRM1-201ENST00000323848 ST18O60284 1047 aa16.67■□□□□ 0.26
SRRM1-201ENST00000323848 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
SRRM1-201ENST00000323848 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
SRRM1-201ENST00000323848 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
SRRM1-201ENST00000323848 TRIM44Q96DX7 344 aaPredicted RBP16.67■□□□□ 0.26
SRRM1-201ENST00000323848 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
SRRM1-201ENST00000323848 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
SRRM1-201ENST00000323848 EDC4Q6P2E9 1401 aaKnown RBP16.65■□□□□ 0.26
SRRM1-201ENST00000323848 IL16Q14005 1332 aa16.65■□□□□ 0.26
SRRM1-201ENST00000323848 AAMPQ13685 434 aa16.65■□□□□ 0.26
SRRM1-201ENST00000323848 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
SRRM1-201ENST00000323848 SYNMO15061 1565 aa16.65■□□□□ 0.26
SRRM1-201ENST00000323848 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
SRRM1-201ENST00000323848 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
SRRM1-201ENST00000323848 INSRP06213 1382 aa16.65■□□□□ 0.26
SRRM1-201ENST00000323848 REC8O95072 547 aa16.64■□□□□ 0.25
SRRM1-201ENST00000323848 GBP4Q96PP9 640 aa16.64■□□□□ 0.25
SRRM1-201ENST00000323848 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
SRRM1-201ENST00000323848 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
SRRM1-201ENST00000323848 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
SRRM1-201ENST00000323848 FLT4P35916 1363 aa16.64■□□□□ 0.25
SRRM1-201ENST00000323848 KDM4AO75164 1064 aa16.64■□□□□ 0.25
SRRM1-201ENST00000323848 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
SRRM1-201ENST00000323848 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
SRRM1-201ENST00000323848 INO80Q9ULG1 1556 aaPredicted RBP16.63■□□□□ 0.25
SRRM1-201ENST00000323848 ARAP3Q8WWN8 1544 aa16.63■□□□□ 0.25
SRRM1-201ENST00000323848 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
SRRM1-201ENST00000323848 RPAP2Q8IXW5 612 aaPredicted RBP16.63■□□□□ 0.25
SRRM1-201ENST00000323848 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
SRRM1-201ENST00000323848 MAP3K2Q9Y2U5 619 aa16.63■□□□□ 0.25
SRRM1-201ENST00000323848 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 IL17REQ8NFR9 667 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 PLEKHG3A1L390 1219 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 NUCB1Q02818 461 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 MCTP1Q6DN14 999 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 MYD88Q99836 296 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
SRRM1-201ENST00000323848 GLI2P10070 1586 aa16.61■□□□□ 0.25
SRRM1-201ENST00000323848 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
SRRM1-201ENST00000323848 GTF2E1P29083 439 aaPredicted RBP16.61■□□□□ 0.25
SRRM1-201ENST00000323848 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
SRRM1-201ENST00000323848 CHL1O00533 1208 aa16.61■□□□□ 0.25
SRRM1-201ENST00000323848 AACSQ86V21 672 aa16.61■□□□□ 0.25
SRRM1-201ENST00000323848 DNAAF4Q8WXU2 420 aa16.61■□□□□ 0.25
SRRM1-201ENST00000323848 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
SRRM1-201ENST00000323848 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
SRRM1-201ENST00000323848 PPFIA3O75145 1194 aa16.6■□□□□ 0.25
SRRM1-201ENST00000323848 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 TULP4Q9NRJ4 1543 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 TBC1D32Q96NH3 1257 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 SDSP20132 328 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
SRRM1-201ENST00000323848 GOLGA6L3A6NEY3 463 aa16.58■□□□□ 0.25
SRRM1-201ENST00000323848 PTMAP06454 111 aaKnown RBP16.58■□□□□ 0.25
SRRM1-201ENST00000323848 FSD1Q9BTV5 496 aa16.58■□□□□ 0.25
SRRM1-201ENST00000323848 SPG7Q9UQ90 795 aa16.58■□□□□ 0.25
SRRM1-201ENST00000323848 CEP85Q6P2H3 762 aa16.58■□□□□ 0.24
SRRM1-201ENST00000323848 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
SRRM1-201ENST00000323848 MSH6P52701 1360 aa16.58■□□□□ 0.24
SRRM1-201ENST00000323848 MX1P20591 662 aa16.58■□□□□ 0.24
SRRM1-201ENST00000323848 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.24
SRRM1-201ENST00000323848 TOMM22Q9NS69 142 aa16.58■□□□□ 0.24
SRRM1-201ENST00000323848 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms