RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 IGSF1Q8N6C5 1336 aa27.97■■■□□ 2.07
PNKP-201ENST00000322344 RGS12O14924 1447 aa27.96■■■□□ 2.07
PNKP-201ENST00000322344 AMPHP49418 695 aa27.96■■■□□ 2.07
PNKP-201ENST00000322344 RBM25P49756 843 aaKnown RBP27.96■■■□□ 2.07
PNKP-201ENST00000322344 RTF1Q92541 710 aaKnown RBP27.96■■■□□ 2.07
PNKP-201ENST00000322344 SLKQ9H2G2 1235 aaPredicted RBP27.96■■■□□ 2.07
PNKP-201ENST00000322344 GAS2L2Q8NHY3 880 aa27.96■■■□□ 2.07
PNKP-201ENST00000322344 RGPD8O14715 1765 aaPredicted RBP27.94■■■□□ 2.06
PNKP-201ENST00000322344 MTHFSDQ2M296 383 aaKnown RBP27.94■■■□□ 2.06
PNKP-201ENST00000322344 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
PNKP-201ENST00000322344 HTATSF1O43719 755 aaKnown RBP27.93■■■□□ 2.06
PNKP-201ENST00000322344 KRT24Q2M2I5 525 aa27.92■■■□□ 2.06
PNKP-201ENST00000322344 PLPPR3Q6T4P5 718 aa27.92■■■□□ 2.06
PNKP-201ENST00000322344 RPAP2Q8IXW5 612 aaPredicted RBP27.92■■■□□ 2.06
PNKP-201ENST00000322344 DCTPP1Q9H773 170 aa27.92■■■□□ 2.06
PNKP-201ENST00000322344 EIF5BO60841 1220 aaKnown RBP27.92■■■□□ 2.06
PNKP-201ENST00000322344 ANKRD44Q8N8A2 993 aa27.91■■■□□ 2.06
PNKP-201ENST00000322344 EYA1Q99502 592 aa27.91■■■□□ 2.06
PNKP-201ENST00000322344 NLRP6P59044 892 aa27.9■■■□□ 2.06
PNKP-201ENST00000322344 KCNA6P17658 529 aa27.89■■■□□ 2.06
PNKP-201ENST00000322344 HSCBQ8IWL3 235 aa27.89■■■□□ 2.06
PNKP-201ENST00000322344 TSPYL4Q9UJ04 414 aa27.89■■■□□ 2.06
PNKP-201ENST00000322344 CEP170BQ9Y4F5 1589 aaPredicted RBP27.89■■■□□ 2.06
PNKP-201ENST00000322344 ATP10DQ9P241 1426 aa27.89■■■□□ 2.05
PNKP-201ENST00000322344 SNX21Q969T3 373 aa27.87■■■□□ 2.05
PNKP-201ENST00000322344 FOXO3O43524 673 aa27.86■■■□□ 2.05
PNKP-201ENST00000322344 RTL1A6NKG5 1358 aa27.85■■■□□ 2.05
PNKP-201ENST00000322344 MSH6P52701 1360 aa27.85■■■□□ 2.05
PNKP-201ENST00000322344 SLC4A2P04920 1241 aa27.85■■■□□ 2.05
PNKP-201ENST00000322344 LRRC37A3O60309 1634 aa27.84■■■□□ 2.05
PNKP-201ENST00000322344 HOXC9P31274 260 aa27.84■■■□□ 2.05
PNKP-201ENST00000322344 CDC45O75419 566 aa27.84■■■□□ 2.05
PNKP-201ENST00000322344 CEP85Q6P2H3 762 aa27.84■■■□□ 2.05
PNKP-201ENST00000322344 CHMP5Q9NZZ3 219 aa27.84■■■□□ 2.05
PNKP-201ENST00000322344 TBC1D9Q6ZT07 1266 aa27.83■■■□□ 2.05
PNKP-201ENST00000322344 MARF1Q9Y4F3 1742 aaKnown RBP27.83■■■□□ 2.05
PNKP-201ENST00000322344 SOS1Q07889 1333 aaPredicted RBP27.83■■■□□ 2.05
PNKP-201ENST00000322344 CCT4P50991 539 aaKnown RBP27.82■■■□□ 2.04
PNKP-201ENST00000322344 PLEKHM2Q8IWE5 1019 aa27.82■■■□□ 2.04
PNKP-201ENST00000322344 BABAM1Q9NWV8 329 aa27.81■■■□□ 2.04
PNKP-201ENST00000322344 GNAT3A8MTJ3 354 aa27.8■■■□□ 2.04
PNKP-201ENST00000322344 MIS18AQ9NYP9 233 aa27.8■■■□□ 2.04
PNKP-201ENST00000322344 NWD1Q149M9 1564 aa27.8■■■□□ 2.04
PNKP-201ENST00000322344 ABTB2Q8N961 1025 aa27.8■■■□□ 2.04
PNKP-201ENST00000322344 NCOA3Q9Y6Q9 1424 aa27.79■■■□□ 2.04
PNKP-201ENST00000322344 HMMRO75330 724 aa27.78■■■□□ 2.04
PNKP-201ENST00000322344 MEIS3Q99687 375 aa27.78■■■□□ 2.04
PNKP-201ENST00000322344 STK31Q9BXU1 1019 aa27.78■■■□□ 2.04
PNKP-201ENST00000322344 TTC22Q5TAA0 569 aa27.77■■■□□ 2.04
PNKP-201ENST00000322344 MAP3K5Q99683 1374 aa27.76■■■□□ 2.03
PNKP-201ENST00000322344 PHF8Q9UPP1 1060 aa27.76■■■□□ 2.03
PNKP-201ENST00000322344 GSPT1P15170 499 aaKnown RBP27.75■■■□□ 2.03
PNKP-201ENST00000322344 ANKLE2Q86XL3 938 aa27.75■■■□□ 2.03
PNKP-201ENST00000322344 CCDC30Q5VVM6 783 aa27.75■■■□□ 2.03
PNKP-201ENST00000322344 CHD2O14647 1828 aaKnown RBP27.74■■■□□ 2.03
PNKP-201ENST00000322344 SPRYD3Q8NCJ5 442 aa27.74■■■□□ 2.03
PNKP-201ENST00000322344 NUTM2GQ5VZR2 741 aa27.74■■■□□ 2.03
PNKP-201ENST00000322344 G2E3Q7L622 706 aa27.74■■■□□ 2.03
PNKP-201ENST00000322344 KIF2CQ99661 725 aa27.72■■■□□ 2.03
PNKP-201ENST00000322344 ZNF142P52746 1687 aaPredicted RBP27.71■■■□□ 2.03
PNKP-201ENST00000322344 CIZ1Q9ULV3 898 aaPredicted RBP27.7■■■□□ 2.03
PNKP-201ENST00000322344 MCM4P33991 863 aa27.7■■■□□ 2.02
PNKP-201ENST00000322344 TAF7Q15545 349 aaPredicted RBP27.7■■■□□ 2.02
PNKP-201ENST00000322344 SLC4A10Q6U841 1118 aa27.7■■■□□ 2.02
PNKP-201ENST00000322344 FAM208AQ9UK61 1670 aaKnown RBP27.7■■■□□ 2.02
PNKP-201ENST00000322344 DDIT3P35638 169 aa27.69■■■□□ 2.02
PNKP-201ENST00000322344 GNAI2P04899 355 aa27.68■■■□□ 2.02
PNKP-201ENST00000322344 HSP90AB1P08238 724 aaKnown RBP27.68■■■□□ 2.02
PNKP-201ENST00000322344 FLIIQ13045 1269 aa27.68■■■□□ 2.02
PNKP-201ENST00000322344 IL17REQ8NFR9 667 aa27.68■■■□□ 2.02
PNKP-201ENST00000322344 IP6K1Q92551 441 aa27.68■■■□□ 2.02
PNKP-201ENST00000322344 F6X3S4 739 aa27.67■■■□□ 2.02
PNKP-201ENST00000322344 C16orf71Q8IYS4 520 aaPredicted RBP27.67■■■□□ 2.02
PNKP-201ENST00000322344 ADGRL3Q9HAR2 1447 aa27.67■■■□□ 2.02
PNKP-201ENST00000322344 GNAI3P08754 354 aa27.67■■■□□ 2.02
PNKP-201ENST00000322344 CASC1Q6TDU7 716 aa27.67■■■□□ 2.02
PNKP-201ENST00000322344 C14orf37Q86TY3 774 aa27.67■■■□□ 2.02
PNKP-201ENST00000322344 LTV1Q96GA3 475 aaPredicted RBP27.66■■■□□ 2.02
PNKP-201ENST00000322344 NFAT5O94916 1531 aa27.66■■■□□ 2.02
PNKP-201ENST00000322344 PXDNLA1KZ92 1463 aa27.65■■■□□ 2.02
PNKP-201ENST00000322344 LTN1O94822 1766 aa27.64■■■□□ 2.02
PNKP-201ENST00000322344 FKBP5Q13451 457 aaPredicted RBP27.64■■■□□ 2.02
PNKP-201ENST00000322344 KCNH5Q8NCM2 988 aa27.64■■■□□ 2.02
PNKP-201ENST00000322344 CACNA1FO60840 1977 aa27.63■■■□□ 2.01
PNKP-201ENST00000322344 K7ELQ4 463 aaPredicted RBP27.63■■■□□ 2.01
PNKP-201ENST00000322344 TRHP20396 242 aaPredicted RBP27.63■■■□□ 2.01
PNKP-201ENST00000322344 OSBPL3Q9H4L5 887 aa27.63■■■□□ 2.01
PNKP-201ENST00000322344 OTUD7AQ8TE49 926 aaPredicted RBP27.62■■■□□ 2.01
PNKP-201ENST00000322344 SMARCA5O60264 1052 aaPredicted RBP27.62■■■□□ 2.01
PNKP-201ENST00000322344 CEMIPQ8WUJ3 1361 aa27.61■■■□□ 2.01
PNKP-201ENST00000322344 SDSP20132 328 aa27.61■■■□□ 2.01
PNKP-201ENST00000322344 RABEP1Q15276 862 aa27.61■■■□□ 2.01
PNKP-201ENST00000322344 CHMP4AQ9BY43 222 aa27.61■■■□□ 2.01
PNKP-201ENST00000322344 N4BP2Q86UW6 1770 aaPredicted RBP27.61■■■□□ 2.01
PNKP-201ENST00000322344 PHRF1Q9P1Y6 1649 aaKnown RBP27.61■■■□□ 2.01
PNKP-201ENST00000322344 DDX11L8A8MPP1 907 aa27.6■■■□□ 2.01
PNKP-201ENST00000322344 PSME1Q06323 249 aa27.6■■■□□ 2.01
PNKP-201ENST00000322344 APBB1O00213 710 aa27.58■■■□□ 2.01
PNKP-201ENST00000322344 USP26Q9BXU7 913 aa27.58■■■□□ 2.01
PNKP-201ENST00000322344 MED1Q15648 1581 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms