RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 CARD10Q9BWT7 1032 aa25.73■■□□□ 1.71
CCDC71-201ENST00000321895 CRB1P82279 1406 aa25.73■■□□□ 1.71
CCDC71-201ENST00000321895 NRAPQ86VF7 1730 aa25.72■■□□□ 1.71
CCDC71-201ENST00000321895 LARP1Q6PKG0 1096 aaKnown RBP25.72■■□□□ 1.71
CCDC71-201ENST00000321895 MEGF6O75095 1541 aa25.71■■□□□ 1.71
CCDC71-201ENST00000321895 HTATSF1O43719 755 aaKnown RBP25.71■■□□□ 1.71
CCDC71-201ENST00000321895 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
CCDC71-201ENST00000321895 TATP17735 454 aaPredicted RBP25.7■■□□□ 1.7
CCDC71-201ENST00000321895 MYH16Q9H6N6 1097 aa25.7■■□□□ 1.7
CCDC71-201ENST00000321895 MAP3K5Q99683 1374 aa25.7■■□□□ 1.7
CCDC71-201ENST00000321895 PKD1L3Q7Z443 1732 aa25.69■■□□□ 1.7
CCDC71-201ENST00000321895 SLIT2O94813 1529 aa25.69■■□□□ 1.7
CCDC71-201ENST00000321895 GNAT3A8MTJ3 354 aa25.68■■□□□ 1.7
CCDC71-201ENST00000321895 RTF1Q92541 710 aaKnown RBP25.68■■□□□ 1.7
CCDC71-201ENST00000321895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.68■■□□□ 1.7
CCDC71-201ENST00000321895 LRP6O75581 1613 aa25.67■■□□□ 1.7
CCDC71-201ENST00000321895 THUMPD2Q9BTF0 503 aaKnown RBP25.67■■□□□ 1.7
CCDC71-201ENST00000321895 OVOS2A0A0G2JMS6 1433 aa25.66■■□□□ 1.7
CCDC71-201ENST00000321895 LRRC37A3O60309 1634 aa25.66■■□□□ 1.7
CCDC71-201ENST00000321895 ZNF530Q6P9A1 599 aaPredicted RBP25.66■■□□□ 1.7
CCDC71-201ENST00000321895 DCTN1Q14203 1278 aa25.65■■□□□ 1.7
CCDC71-201ENST00000321895 AKAP4Q5JQC9 854 aa25.64■■□□□ 1.7
CCDC71-201ENST00000321895 MCM10Q7L590 875 aa25.64■■□□□ 1.7
CCDC71-201ENST00000321895 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
CCDC71-201ENST00000321895 IFT57Q9NWB7 429 aa25.64■■□□□ 1.69
CCDC71-201ENST00000321895 GNAI1P63096 354 aa25.63■■□□□ 1.69
CCDC71-201ENST00000321895 FANCIQ9NVI1 1328 aa25.62■■□□□ 1.69
CCDC71-201ENST00000321895 IL2RBP14784 551 aa25.62■■□□□ 1.69
CCDC71-201ENST00000321895 C1orf141Q5JVX7 400 aa25.62■■□□□ 1.69
CCDC71-201ENST00000321895 ZNF853P0CG23 659 aa25.61■■□□□ 1.69
CCDC71-201ENST00000321895 VIRMAQ69YN4 1812 aaKnown RBP25.61■■□□□ 1.69
CCDC71-201ENST00000321895 CFAP44Q96MT7 982 aa25.61■■□□□ 1.69
CCDC71-201ENST00000321895 WNK3Q9BYP7 1800 aa25.6■■□□□ 1.69
CCDC71-201ENST00000321895 C8orf37Q96NL8 207 aa25.6■■□□□ 1.69
CCDC71-201ENST00000321895 NGLY1Q96IV0 654 aa25.59■■□□□ 1.69
CCDC71-201ENST00000321895 RCAN3Q9UKA8 241 aa25.59■■□□□ 1.69
CCDC71-201ENST00000321895 ADAMTS7Q9UKP4 1686 aa25.59■■□□□ 1.69
CCDC71-201ENST00000321895 TSR2Q969E8 191 aaKnown RBP25.59■■□□□ 1.69
CCDC71-201ENST00000321895 CEMIPQ8WUJ3 1361 aa25.58■■□□□ 1.69
CCDC71-201ENST00000321895 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.58■■□□□ 1.69
CCDC71-201ENST00000321895 IL17REQ8NFR9 667 aa25.58■■□□□ 1.69
CCDC71-201ENST00000321895 USP35Q9P2H5 1018 aa25.58■■□□□ 1.69
CCDC71-201ENST00000321895 DISP2A7MBM2 1401 aa25.57■■□□□ 1.68
CCDC71-201ENST00000321895 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
CCDC71-201ENST00000321895 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
CCDC71-201ENST00000321895 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
CCDC71-201ENST00000321895 SUPT16HQ9Y5B9 1047 aaKnown RBP25.57■■□□□ 1.68
CCDC71-201ENST00000321895 BCL9LQ86UU0 1499 aa25.56■■□□□ 1.68
CCDC71-201ENST00000321895 IFNL2Q8IZJ0 200 aa25.56■■□□□ 1.68
CCDC71-201ENST00000321895 SPATA31A1Q5TZJ5 1347 aa25.55■■□□□ 1.68
CCDC71-201ENST00000321895 SHANK3Q9BYB0 1731 aa25.55■■□□□ 1.68
CCDC71-201ENST00000321895 PHKG2P15735 406 aa25.55■■□□□ 1.68
CCDC71-201ENST00000321895 ZCRB1Q8TBF4 217 aaKnown RBP25.55■■□□□ 1.68
CCDC71-201ENST00000321895 THRAP3Q9Y2W1 955 aaKnown RBP25.55■■□□□ 1.68
CCDC71-201ENST00000321895 PCDH11XQ9BZA7 1347 aa25.55■■□□□ 1.68
CCDC71-201ENST00000321895 PCDH11YQ9BZA8 1340 aa25.55■■□□□ 1.68
CCDC71-201ENST00000321895 SCN11AQ9UI33 1791 aa25.55■■□□□ 1.68
CCDC71-201ENST00000321895 CHL1O00533 1208 aa25.54■■□□□ 1.68
CCDC71-201ENST00000321895 MEX3CQ5U5Q3 659 aaKnown RBP25.54■■□□□ 1.68
CCDC71-201ENST00000321895 MBIPQ9NS73 344 aa25.54■■□□□ 1.68
CCDC71-201ENST00000321895 SPATA31A5Q5VU36 1347 aa25.54■■□□□ 1.68
CCDC71-201ENST00000321895 SPATA31A7Q8IWB4 1347 aa25.54■■□□□ 1.68
CCDC71-201ENST00000321895 CT47B1P0C2W7 299 aaPredicted RBP25.54■■□□□ 1.68
CCDC71-201ENST00000321895 RNMTO43148 476 aaKnown RBP25.53■■□□□ 1.68
CCDC71-201ENST00000321895 CYP27B1O15528 508 aa25.52■■□□□ 1.68
CCDC71-201ENST00000321895 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
CCDC71-201ENST00000321895 CDCA7Q9BWT1 371 aaPredicted RBP25.52■■□□□ 1.68
CCDC71-201ENST00000321895 HSP90AB1P08238 724 aaKnown RBP25.51■■□□□ 1.67
CCDC71-201ENST00000321895 EXOSC9Q06265 439 aaKnown RBP25.51■■□□□ 1.67
CCDC71-201ENST00000321895 LGR6Q9HBX8 967 aa25.51■■□□□ 1.67
CCDC71-201ENST00000321895 BABAM1Q9NWV8 329 aa25.51■■□□□ 1.67
CCDC71-201ENST00000321895 VPS72Q15906 364 aa25.51■■□□□ 1.67
CCDC71-201ENST00000321895 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
CCDC71-201ENST00000321895 KDM6AO15550 1401 aaPredicted RBP25.5■■□□□ 1.67
CCDC71-201ENST00000321895 SIPA1L3O60292 1781 aaPredicted RBP25.49■■□□□ 1.67
CCDC71-201ENST00000321895 TAF7Q15545 349 aaPredicted RBP25.49■■□□□ 1.67
CCDC71-201ENST00000321895 TEFQ10587 303 aa25.49■■□□□ 1.67
CCDC71-201ENST00000321895 DCAF5Q96JK2 942 aa25.49■■□□□ 1.67
CCDC71-201ENST00000321895 USP21Q9UK80 565 aa25.49■■□□□ 1.67
CCDC71-201ENST00000321895 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
CCDC71-201ENST00000321895 CCDC9Q9Y3X0 531 aaKnown RBP25.48■■□□□ 1.67
CCDC71-201ENST00000321895 TSPYL4Q9UJ04 414 aa25.47■■□□□ 1.67
CCDC71-201ENST00000321895 MRC1P22897 1456 aa25.46■■□□□ 1.67
CCDC71-201ENST00000321895 TNS2Q63HR2 1409 aa25.46■■□□□ 1.67
CCDC71-201ENST00000321895 KDM3BQ7LBC6 1761 aa25.45■■□□□ 1.67
CCDC71-201ENST00000321895 NEFLP07196 543 aa25.45■■□□□ 1.66
CCDC71-201ENST00000321895 AFF2P51816 1311 aa25.44■■□□□ 1.66
CCDC71-201ENST00000321895 NKX1-1Q15270 411 aaPredicted RBP25.44■■□□□ 1.66
CCDC71-201ENST00000321895 FBXO41Q8TF61 875 aa25.44■■□□□ 1.66
CCDC71-201ENST00000321895 MIS18AQ9NYP9 233 aa25.44■■□□□ 1.66
CCDC71-201ENST00000321895 ZNF428Q96B54 188 aa25.43■■□□□ 1.66
CCDC71-201ENST00000321895 EXOC5O00471 708 aa25.42■■□□□ 1.66
CCDC71-201ENST00000321895 RARSP54136 660 aaKnown RBP25.42■■□□□ 1.66
CCDC71-201ENST00000321895 RRP1P56182 461 aaKnown RBP25.42■■□□□ 1.66
CCDC71-201ENST00000321895 DDX54Q8TDD1 881 aaKnown RBP25.42■■□□□ 1.66
CCDC71-201ENST00000321895 GTF3C3Q9Y5Q9 886 aa25.42■■□□□ 1.66
CCDC71-201ENST00000321895 SLC52A2Q9HAB3 445 aa25.41■■□□□ 1.66
CCDC71-201ENST00000321895 TWISTNBQ3B726 338 aaPredicted RBP25.4■■□□□ 1.66
CCDC71-201ENST00000321895 C8orf58Q8NAV2 365 aa25.4■■□□□ 1.66
CCDC71-201ENST00000321895 BTBD11A6QL63 1104 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms