RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 BCL11BQ9C0K0 894 aaPredicted RBP26.89■■□□□ 1.9
HIGD1A-201ENST00000321331 IGSF1Q8N6C5 1336 aa26.85■■□□□ 1.89
HIGD1A-201ENST00000321331 PARD3Q8TEW0 1356 aa26.84■■□□□ 1.89
HIGD1A-201ENST00000321331 SHANK3Q9BYB0 1731 aa26.83■■□□□ 1.89
HIGD1A-201ENST00000321331 PCDH11XQ9BZA7 1347 aa26.83■■□□□ 1.89
HIGD1A-201ENST00000321331 PCDH11YQ9BZA8 1340 aa26.83■■□□□ 1.89
HIGD1A-201ENST00000321331 EZH2Q15910 746 aaKnown RBP26.83■■□□□ 1.88
HIGD1A-201ENST00000321331 ACSBG1Q96GR2 724 aa26.83■■□□□ 1.88
HIGD1A-201ENST00000321331 CAMKK2Q96RR4 588 aa26.83■■□□□ 1.88
HIGD1A-201ENST00000321331 NHSQ6T4R5 1651 aa26.81■■□□□ 1.88
HIGD1A-201ENST00000321331 IL13P35225 146 aa26.81■■□□□ 1.88
HIGD1A-201ENST00000321331 SPG7Q9UQ90 795 aa26.81■■□□□ 1.88
HIGD1A-201ENST00000321331 PTF1AQ7RTS3 328 aa26.8■■□□□ 1.88
HIGD1A-201ENST00000321331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.8■■□□□ 1.88
HIGD1A-201ENST00000321331 PLEKHG2Q9H7P9 1386 aa26.79■■□□□ 1.88
HIGD1A-201ENST00000321331 PKD1L3Q7Z443 1732 aa26.79■■□□□ 1.88
HIGD1A-201ENST00000321331 KAT6BQ8WYB5 2073 aa26.79■■□□□ 1.88
HIGD1A-201ENST00000321331 PLSCR1O15162 318 aa26.79■■□□□ 1.88
HIGD1A-201ENST00000321331 KCNQ2O43526 872 aa26.79■■□□□ 1.88
HIGD1A-201ENST00000321331 DIAPH1O60610 1272 aaKnown RBP26.77■■□□□ 1.88
HIGD1A-201ENST00000321331 DDX10Q13206 875 aaKnown RBP26.77■■□□□ 1.88
HIGD1A-201ENST00000321331 RGPD3A6NKT7 1758 aaPredicted RBP26.76■■□□□ 1.87
HIGD1A-201ENST00000321331 RGPD4Q7Z3J3 1758 aa26.76■■□□□ 1.87
HIGD1A-201ENST00000321331 SULT6B1Q6IMI4 303 aa26.75■■□□□ 1.87
HIGD1A-201ENST00000321331 CYP27B1O15528 508 aa26.74■■□□□ 1.87
HIGD1A-201ENST00000321331 SYTL4Q96C24 671 aaPredicted RBP26.73■■□□□ 1.87
HIGD1A-201ENST00000321331 CFAP53Q96M91 514 aa26.73■■□□□ 1.87
HIGD1A-201ENST00000321331 RREB1Q92766 1687 aa26.73■■□□□ 1.87
HIGD1A-201ENST00000321331 DOT1LQ8TEK3 1739 aa26.73■■□□□ 1.87
HIGD1A-201ENST00000321331 PPP2R1AP30153 589 aa26.72■■□□□ 1.87
HIGD1A-201ENST00000321331 AEBP1Q8IUX7 1158 aa26.72■■□□□ 1.87
HIGD1A-201ENST00000321331 KDRP35968 1356 aa26.72■■□□□ 1.87
HIGD1A-201ENST00000321331 PRIM1P49642 420 aaKnown RBP26.71■■□□□ 1.87
HIGD1A-201ENST00000321331 PLEKHO1Q53GL0 409 aaPredicted RBP26.71■■□□□ 1.87
HIGD1A-201ENST00000321331 BTAF1O14981 1849 aa26.71■■□□□ 1.87
HIGD1A-201ENST00000321331 COL3A1P02461 1466 aaPredicted RBP26.71■■□□□ 1.87
HIGD1A-201ENST00000321331 IFNL2Q8IZJ0 200 aa26.71■■□□□ 1.87
HIGD1A-201ENST00000321331 AMOTQ4VCS5 1084 aa26.7■■□□□ 1.86
HIGD1A-201ENST00000321331 PHKG2P15735 406 aa26.68■■□□□ 1.86
HIGD1A-201ENST00000321331 NKX1-1Q15270 411 aaPredicted RBP26.68■■□□□ 1.86
HIGD1A-201ENST00000321331 NBPF14Q5TI25 921 aa26.68■■□□□ 1.86
HIGD1A-201ENST00000321331 NUP188Q5SRE5 1749 aa26.67■■□□□ 1.86
HIGD1A-201ENST00000321331 U2SURPO15042 1029 aaKnown RBP26.66■■□□□ 1.86
HIGD1A-201ENST00000321331 HMOX1P09601 288 aa26.66■■□□□ 1.86
HIGD1A-201ENST00000321331 TXNRD1Q16881 649 aa26.66■■□□□ 1.86
HIGD1A-201ENST00000321331 RALBP1Q15311 655 aa26.64■■□□□ 1.86
HIGD1A-201ENST00000321331 ZNF530Q6P9A1 599 aaPredicted RBP26.64■■□□□ 1.86
HIGD1A-201ENST00000321331 PROM2Q8N271 834 aa26.64■■□□□ 1.86
HIGD1A-201ENST00000321331 NUDCQ9Y266 331 aa26.64■■□□□ 1.86
HIGD1A-201ENST00000321331 HSP90AB1P08238 724 aaKnown RBP26.63■■□□□ 1.85
HIGD1A-201ENST00000321331 MPRIPQ6WCQ1 1025 aa26.62■■□□□ 1.85
HIGD1A-201ENST00000321331 PSDA5PKW4 1024 aaPredicted RBP26.61■■□□□ 1.85
HIGD1A-201ENST00000321331 C1orf141Q5JVX7 400 aa26.61■■□□□ 1.85
HIGD1A-201ENST00000321331 TOGARAM1Q9Y4F4 1720 aa26.61■■□□□ 1.85
HIGD1A-201ENST00000321331 R3HDM1Q15032 1099 aaKnown RBP26.6■■□□□ 1.85
HIGD1A-201ENST00000321331 ZNF316A6NFI3 1004 aaPredicted RBP26.59■■□□□ 1.85
HIGD1A-201ENST00000321331 DCAF5Q96JK2 942 aa26.58■■□□□ 1.85
HIGD1A-201ENST00000321331 ITGB4P16144 1822 aa26.58■■□□□ 1.85
HIGD1A-201ENST00000321331 SLC27A3Q5K4L6 730 aa26.57■■□□□ 1.84
HIGD1A-201ENST00000321331 TMOD3Q9NYL9 352 aa26.57■■□□□ 1.84
HIGD1A-201ENST00000321331 ERVV-2B6SEH9 535 aa26.55■■□□□ 1.84
HIGD1A-201ENST00000321331 U2AF1L5P0DN76 240 aaPredicted RBP26.54■■□□□ 1.84
HIGD1A-201ENST00000321331 U2AF1Q01081 240 aaKnown RBP eCLIP26.54■■□□□ 1.84
HIGD1A-201ENST00000321331 AKAP4Q5JQC9 854 aa26.54■■□□□ 1.84
HIGD1A-201ENST00000321331 PIGBQ92521 554 aa26.54■■□□□ 1.84
HIGD1A-201ENST00000321331 SMARCC1Q92922 1105 aaPredicted RBP26.54■■□□□ 1.84
HIGD1A-201ENST00000321331 LY75O60449 1722 aa26.53■■□□□ 1.84
HIGD1A-201ENST00000321331 ANO8Q9HCE9 1232 aaPredicted RBP26.53■■□□□ 1.84
HIGD1A-201ENST00000321331 STK32BQ9NY57 414 aa26.53■■□□□ 1.84
HIGD1A-201ENST00000321331 KDM6AO15550 1401 aaPredicted RBP26.52■■□□□ 1.84
HIGD1A-201ENST00000321331 MTHFSDQ2M296 383 aaKnown RBP26.51■■□□□ 1.83
HIGD1A-201ENST00000321331 LRRC4BQ9NT99 713 aa26.51■■□□□ 1.83
HIGD1A-201ENST00000321331 MYBBP1AQ9BQG0 1328 aaKnown RBP26.51■■□□□ 1.83
HIGD1A-201ENST00000321331 PALLDQ8WX93 1383 aa26.51■■□□□ 1.83
HIGD1A-201ENST00000321331 RSPH6AQ9H0K4 717 aa26.5■■□□□ 1.83
HIGD1A-201ENST00000321331 CCNL1Q9UK58 526 aaPredicted RBP26.5■■□□□ 1.83
HIGD1A-201ENST00000321331 PRKAR2BP31323 418 aa26.49■■□□□ 1.83
HIGD1A-201ENST00000321331 CABP4P57796 275 aa26.49■■□□□ 1.83
HIGD1A-201ENST00000321331 SLC15A2Q16348 729 aa26.49■■□□□ 1.83
HIGD1A-201ENST00000321331 GAS2L2Q8NHY3 880 aa26.49■■□□□ 1.83
HIGD1A-201ENST00000321331 FCHSD2O94868 740 aa26.48■■□□□ 1.83
HIGD1A-201ENST00000321331 HMGB2P26583 209 aaKnown RBP26.48■■□□□ 1.83
HIGD1A-201ENST00000321331 PAPPAQ13219 1627 aa26.48■■□□□ 1.83
HIGD1A-201ENST00000321331 PRKRIP1Q9H875 184 aaPredicted RBP26.46■■□□□ 1.83
HIGD1A-201ENST00000321331 SCN11AQ9UI33 1791 aa26.45■■□□□ 1.82
HIGD1A-201ENST00000321331 KCNQ4P56696 695 aa26.45■■□□□ 1.82
HIGD1A-201ENST00000321331 ASAP1Q9ULH1 1129 aa26.44■■□□□ 1.82
HIGD1A-201ENST00000321331 NEFMP07197 916 aa26.43■■□□□ 1.82
HIGD1A-201ENST00000321331 NFATC2IPQ8NCF5 419 aa26.43■■□□□ 1.82
HIGD1A-201ENST00000321331 PHACTR3Q96KR7 559 aa26.43■■□□□ 1.82
HIGD1A-201ENST00000321331 ATG3Q9NT62 314 aa26.43■■□□□ 1.82
HIGD1A-201ENST00000321331 RNMTO43148 476 aaKnown RBP26.42■■□□□ 1.82
HIGD1A-201ENST00000321331 MAP3K5Q99683 1374 aa26.41■■□□□ 1.82
HIGD1A-201ENST00000321331 GNAT3A8MTJ3 354 aa26.41■■□□□ 1.82
HIGD1A-201ENST00000321331 ZNF827Q17R98 1081 aa26.41■■□□□ 1.82
HIGD1A-201ENST00000321331 LGR6Q9HBX8 967 aa26.41■■□□□ 1.82
HIGD1A-201ENST00000321331 LOC102724428A0A0B4J2F2 783 aa26.4■■□□□ 1.82
HIGD1A-201ENST00000321331 SIK1P57059 783 aa26.4■■□□□ 1.82
HIGD1A-201ENST00000321331 AKT1S1Q96B36 256 aa26.4■■□□□ 1.82
HIGD1A-201ENST00000321331 PNNQ9H307 717 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms