RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 AMPHP49418 695 aa11.39□□□□□ -0.59
TPM3-203ENST00000312970 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
TPM3-203ENST00000312970 LTV1Q96GA3 475 aaPredicted RBP11.39□□□□□ -0.59
TPM3-203ENST00000312970 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
TPM3-203ENST00000312970 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
TPM3-203ENST00000312970 TNS2Q63HR2 1409 aa11.38□□□□□ -0.59
TPM3-203ENST00000312970 FHDC1Q9C0D6 1143 aaPredicted RBP11.38□□□□□ -0.59
TPM3-203ENST00000312970 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
TPM3-203ENST00000312970 ANKRD36BQ8N2N9 1353 aa11.38□□□□□ -0.59
TPM3-203ENST00000312970 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
TPM3-203ENST00000312970 FYB1O15117 783 aa11.37□□□□□ -0.59
TPM3-203ENST00000312970 FBLN1P23142 703 aa11.37□□□□□ -0.59
TPM3-203ENST00000312970 HOXC9P31274 260 aa11.37□□□□□ -0.59
TPM3-203ENST00000312970 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
TPM3-203ENST00000312970 STK32BQ9NY57 414 aa11.37□□□□□ -0.59
TPM3-203ENST00000312970 USP47Q96K76 1375 aa11.37□□□□□ -0.59
TPM3-203ENST00000312970 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
TPM3-203ENST00000312970 SLC15A2Q16348 729 aa11.36□□□□□ -0.59
TPM3-203ENST00000312970 BTAF1O14981 1849 aa11.36□□□□□ -0.59
TPM3-203ENST00000312970 SGIP1Q9BQI5 828 aa11.35□□□□□ -0.59
TPM3-203ENST00000312970 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
TPM3-203ENST00000312970 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
TPM3-203ENST00000312970 KAT6BQ8WYB5 2073 aa11.34□□□□□ -0.59
TPM3-203ENST00000312970 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
TPM3-203ENST00000312970 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
TPM3-203ENST00000312970 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
TPM3-203ENST00000312970 RRS1Q15050 365 aaKnown RBP11.33□□□□□ -0.6
TPM3-203ENST00000312970 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
TPM3-203ENST00000312970 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
TPM3-203ENST00000312970 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
TPM3-203ENST00000312970 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
TPM3-203ENST00000312970 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 SYTL4Q96C24 671 aaPredicted RBP11.31□□□□□ -0.6
TPM3-203ENST00000312970 CARD14Q9BXL6 1004 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 MTFR1LQ9H019 292 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 LRRC4BQ9NT99 713 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 QSER1Q2KHR3 1735 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
TPM3-203ENST00000312970 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
TPM3-203ENST00000312970 RAPGEF4Q8WZA2 1011 aa11.3□□□□□ -0.6
TPM3-203ENST00000312970 ARXQ96QS3 562 aa11.3□□□□□ -0.6
TPM3-203ENST00000312970 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
TPM3-203ENST00000312970 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
TPM3-203ENST00000312970 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
TPM3-203ENST00000312970 INSRP06213 1382 aa11.28□□□□□ -0.6
TPM3-203ENST00000312970 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
TPM3-203ENST00000312970 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
TPM3-203ENST00000312970 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
TPM3-203ENST00000312970 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
TPM3-203ENST00000312970 GPR162Q16538 588 aa11.28□□□□□ -0.6
TPM3-203ENST00000312970 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
TPM3-203ENST00000312970 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
TPM3-203ENST00000312970 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.61
TPM3-203ENST00000312970 SHANK3Q9BYB0 1731 aa11.27□□□□□ -0.61
TPM3-203ENST00000312970 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
TPM3-203ENST00000312970 SLC16A10Q8TF71 515 aa11.27□□□□□ -0.61
TPM3-203ENST00000312970 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
TPM3-203ENST00000312970 FLT4P35916 1363 aa11.27□□□□□ -0.61
TPM3-203ENST00000312970 LY75O60449 1722 aa11.26□□□□□ -0.61
TPM3-203ENST00000312970 MEGF6O75095 1541 aa11.26□□□□□ -0.61
TPM3-203ENST00000312970 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
TPM3-203ENST00000312970 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
TPM3-203ENST00000312970 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
TPM3-203ENST00000312970 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
TPM3-203ENST00000312970 KCNQ4P56696 695 aa11.25□□□□□ -0.61
TPM3-203ENST00000312970 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
TPM3-203ENST00000312970 TFCP2L1Q9NZI6 479 aa11.25□□□□□ -0.61
TPM3-203ENST00000312970 KIF20BQ96Q89 1820 aa11.24□□□□□ -0.61
TPM3-203ENST00000312970 HMGB2P26583 209 aaKnown RBP11.24□□□□□ -0.61
TPM3-203ENST00000312970 EIF4G2P78344 907 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM3-203ENST00000312970 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
TPM3-203ENST00000312970 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
TPM3-203ENST00000312970 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
TPM3-203ENST00000312970 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
TPM3-203ENST00000312970 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
TPM3-203ENST00000312970 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
TPM3-203ENST00000312970 NSD2O96028 1365 aa11.23□□□□□ -0.61
TPM3-203ENST00000312970 CYP27B1O15528 508 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 HSPA5P11021 654 aaKnown RBP11.22□□□□□ -0.61
TPM3-203ENST00000312970 POLD1P28340 1107 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 EYA1Q99502 592 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 SPG7Q9UQ90 795 aa11.22□□□□□ -0.61
TPM3-203ENST00000312970 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
TPM3-203ENST00000312970 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
TPM3-203ENST00000312970 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
TPM3-203ENST00000312970 TNNT2P45379 298 aaPredicted RBP11.2□□□□□ -0.62
TPM3-203ENST00000312970 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
TPM3-203ENST00000312970 SMARCC1Q92922 1105 aaPredicted RBP11.2□□□□□ -0.62
TPM3-203ENST00000312970 PANK3Q9H999 370 aa11.2□□□□□ -0.62
TPM3-203ENST00000312970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.625e-7■■■□□ 18.1
TPM3-203ENST00000312970 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
TPM3-203ENST00000312970 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
TPM3-203ENST00000312970 COL23A1Q86Y22 540 aaPredicted RBP11.19□□□□□ -0.62
TPM3-203ENST00000312970 C5P01031 1676 aa11.19□□□□□ -0.62
TPM3-203ENST00000312970 PCNTO95613 3336 aa11.19□□□□□ -0.62
TPM3-203ENST00000312970 TAF1LQ8IZX4 1826 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms