RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
LSMEM1-201ENST00000312849 FSD2A1L4K1 749 aa11.98□□□□□ -0.49
LSMEM1-201ENST00000312849 TRAK2O60296 914 aa11.98□□□□□ -0.49
LSMEM1-201ENST00000312849 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
LSMEM1-201ENST00000312849 GBP4Q96PP9 640 aa11.98□□□□□ -0.49
LSMEM1-201ENST00000312849 RGS12O14924 1447 aa11.98□□□□□ -0.49
LSMEM1-201ENST00000312849 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 SKOR2Q2VWA4 1001 aaPredicted RBP11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 KIF2CQ99661 725 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 CRB1P82279 1406 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 TTC22Q5TAA0 569 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 AEBP1Q8IUX7 1158 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 ATP10DQ9P241 1426 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
LSMEM1-201ENST00000312849 SBNO1A3KN83 1393 aa11.96□□□□□ -0.49
LSMEM1-201ENST00000312849 HMMRO75330 724 aa11.96□□□□□ -0.49
LSMEM1-201ENST00000312849 RAB3GAP1Q15042 981 aa11.96□□□□□ -0.49
LSMEM1-201ENST00000312849 CASC1Q6TDU7 716 aa11.96□□□□□ -0.49
LSMEM1-201ENST00000312849 EID1Q9Y6B2 187 aa11.96□□□□□ -0.49
LSMEM1-201ENST00000312849 FLT4P35916 1363 aa11.96□□□□□ -0.5
LSMEM1-201ENST00000312849 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 RABEP1Q15276 862 aa11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 SLIT1O75093 1534 aa11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 RTL1A6NKG5 1358 aa11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 CCT4P50991 539 aaKnown RBP11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 RTF1Q92541 710 aaKnown RBP11.95□□□□□ -0.5
LSMEM1-201ENST00000312849 PTPRUQ92729 1446 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 KDRP35968 1356 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 MRE11P49959 708 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 MCM10Q7L590 875 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 GAS2L2Q8NHY3 880 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
LSMEM1-201ENST00000312849 GSPT1P15170 499 aaKnown RBP11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 HSP90AB2PQ58FF8 381 aa11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 CLEC17AQ6ZS10 378 aa11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 TNPO1Q92973 898 aaKnown RBP11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 N4BP2Q86UW6 1770 aaPredicted RBP11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 MSH6P52701 1360 aa11.93□□□□□ -0.5
LSMEM1-201ENST00000312849 MAP3K19Q56UN5 1328 aa11.92□□□□□ -0.5
LSMEM1-201ENST00000312849 LTKP29376 864 aa11.92□□□□□ -0.5
LSMEM1-201ENST00000312849 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
LSMEM1-201ENST00000312849 RGPD8O14715 1765 aaPredicted RBP11.92□□□□□ -0.5
LSMEM1-201ENST00000312849 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
LSMEM1-201ENST00000312849 GOLGA6L22H0YM25 854 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 REC8O95072 547 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 XRCC6P12956 609 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 AMOTL2Q9Y2J4 779 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
LSMEM1-201ENST00000312849 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
LSMEM1-201ENST00000312849 AMPHP49418 695 aa11.9□□□□□ -0.5
LSMEM1-201ENST00000312849 MTHFSDQ2M296 383 aaKnown RBP11.9□□□□□ -0.5
LSMEM1-201ENST00000312849 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
LSMEM1-201ENST00000312849 MEIS3Q99687 375 aa11.9□□□□□ -0.5
LSMEM1-201ENST00000312849 STK31Q9BXU1 1019 aa11.9□□□□□ -0.5
LSMEM1-201ENST00000312849 NUCB2P80303 420 aa11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 GZF1Q9H116 711 aaPredicted RBP11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 CWC22Q9HCG8 908 aaKnown RBP11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 GNAI2P04899 355 aa11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 GNAI3P08754 354 aa11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 SDSP20132 328 aa11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
LSMEM1-201ENST00000312849 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
LSMEM1-201ENST00000312849 ST18O60284 1047 aa11.88□□□□□ -0.51
LSMEM1-201ENST00000312849 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
LSMEM1-201ENST00000312849 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
LSMEM1-201ENST00000312849 ERC2O15083 957 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 EYA1Q99502 592 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 GRPEL1Q9HAV7 217 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 MARF1Q9Y4F3 1742 aaKnown RBP11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 GNAT3A8MTJ3 354 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
LSMEM1-201ENST00000312849 FER1L4A9Z1Z3 1794 aa11.86□□□□□ -0.51
LSMEM1-201ENST00000312849 IBTKQ9P2D0 1353 aaPredicted RBP11.86□□□□□ -0.51
LSMEM1-201ENST00000312849 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 PDE1AP54750 535 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms