RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
CCS-201ENST00000310190 PPP2R1AP30153 589 aa24.08■■□□□ 1.45
CCS-201ENST00000310190 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
CCS-201ENST00000310190 RGPD3A6NKT7 1758 aaPredicted RBP24.08■■□□□ 1.44
CCS-201ENST00000310190 RGPD4Q7Z3J3 1758 aa24.08■■□□□ 1.44
CCS-201ENST00000310190 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
CCS-201ENST00000310190 RALBP1Q15311 655 aa24.06■■□□□ 1.44
CCS-201ENST00000310190 BCL11BQ9C0K0 894 aaPredicted RBP24.06■■□□□ 1.44
CCS-201ENST00000310190 NHSQ6T4R5 1651 aa24.05■■□□□ 1.44
CCS-201ENST00000310190 SF3B2Q13435 895 aaKnown RBP24.05■■□□□ 1.44
CCS-201ENST00000310190 DIAPH1O60610 1272 aaKnown RBP24.04■■□□□ 1.44
CCS-201ENST00000310190 PCDH11XQ9BZA7 1347 aa24.04■■□□□ 1.44
CCS-201ENST00000310190 PCDH11YQ9BZA8 1340 aa24.04■■□□□ 1.44
CCS-201ENST00000310190 NKX1-1Q15270 411 aaPredicted RBP24.03■■□□□ 1.44
CCS-201ENST00000310190 TRIM37O94972 964 aa24.02■■□□□ 1.44
CCS-201ENST00000310190 BAG6P46379 1132 aa24.02■■□□□ 1.44
CCS-201ENST00000310190 PLSCR1O15162 318 aa24.01■■□□□ 1.43
CCS-201ENST00000310190 SPG7Q9UQ90 795 aa24.01■■□□□ 1.43
CCS-201ENST00000310190 CYP27B1O15528 508 aa24■■□□□ 1.43
CCS-201ENST00000310190 CFAP53Q96M91 514 aa24■■□□□ 1.43
CCS-201ENST00000310190 AMOTQ4VCS5 1084 aa23.99■■□□□ 1.43
CCS-201ENST00000310190 CAMKK2Q96RR4 588 aa23.99■■□□□ 1.43
CCS-201ENST00000310190 SULT6B1Q6IMI4 303 aa23.97■■□□□ 1.43
CCS-201ENST00000310190 DDX54Q8TDD1 881 aaKnown RBP23.97■■□□□ 1.43
CCS-201ENST00000310190 RREB1Q92766 1687 aa23.96■■□□□ 1.43
CCS-201ENST00000310190 DEFB132Q7Z7B7 95 aa23.96■■□□□ 1.43
CCS-201ENST00000310190 AEBP1Q8IUX7 1158 aa23.96■■□□□ 1.43
CCS-201ENST00000310190 APBA3O96018 575 aa23.95■■□□□ 1.42
CCS-201ENST00000310190 PLEKHO1Q53GL0 409 aaPredicted RBP23.95■■□□□ 1.42
CCS-201ENST00000310190 KAT6BQ8WYB5 2073 aa23.95■■□□□ 1.42
CCS-201ENST00000310190 DOT1LQ8TEK3 1739 aa23.94■■□□□ 1.42
CCS-201ENST00000310190 IFNL2Q8IZJ0 200 aa23.94■■□□□ 1.42
CCS-201ENST00000310190 BTAF1O14981 1849 aa23.94■■□□□ 1.42
CCS-201ENST00000310190 PHKG2P15735 406 aa23.93■■□□□ 1.42
CCS-201ENST00000310190 NUDCQ9Y266 331 aa23.93■■□□□ 1.42
CCS-201ENST00000310190 MYBBP1AQ9BQG0 1328 aaKnown RBP23.92■■□□□ 1.42
CCS-201ENST00000310190 KCNQ2O43526 872 aa23.92■■□□□ 1.42
CCS-201ENST00000310190 PRKRIP1Q9H875 184 aaPredicted RBP23.92■■□□□ 1.42
CCS-201ENST00000310190 EN1Q05925 392 aaPredicted RBP23.91■■□□□ 1.42
CCS-201ENST00000310190 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
CCS-201ENST00000310190 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
CCS-201ENST00000310190 HSP90AB1P08238 724 aaKnown RBP23.9■■□□□ 1.42
CCS-201ENST00000310190 CNGB1Q14028 1251 aaPredicted RBP23.9■■□□□ 1.42
CCS-201ENST00000310190 ITGB4P16144 1822 aa23.89■■□□□ 1.42
CCS-201ENST00000310190 FCHSD2O94868 740 aa23.88■■□□□ 1.41
CCS-201ENST00000310190 ADAMTS7Q9UKP4 1686 aa23.87■■□□□ 1.41
CCS-201ENST00000310190 PRIM1P49642 420 aaKnown RBP23.87■■□□□ 1.41
CCS-201ENST00000310190 EZH2Q15910 746 aaKnown RBP23.87■■□□□ 1.41
CCS-201ENST00000310190 ACSBG1Q96GR2 724 aa23.87■■□□□ 1.41
CCS-201ENST00000310190 DCAF5Q96JK2 942 aa23.87■■□□□ 1.41
CCS-201ENST00000310190 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
CCS-201ENST00000310190 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
CCS-201ENST00000310190 LY75O60449 1722 aa23.85■■□□□ 1.41
CCS-201ENST00000310190 ERVV-2B6SEH9 535 aa23.85■■□□□ 1.41
CCS-201ENST00000310190 HMOX1P09601 288 aa23.85■■□□□ 1.41
CCS-201ENST00000310190 PROM2Q8N271 834 aa23.85■■□□□ 1.41
CCS-201ENST00000310190 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
CCS-201ENST00000310190 AKAP4Q5JQC9 854 aa23.84■■□□□ 1.41
CCS-201ENST00000310190 ZNF530Q6P9A1 599 aaPredicted RBP23.84■■□□□ 1.41
CCS-201ENST00000310190 SCN11AQ9UI33 1791 aa23.83■■□□□ 1.41
CCS-201ENST00000310190 KDM6AO15550 1401 aaPredicted RBP23.82■■□□□ 1.4
CCS-201ENST00000310190 C1orf141Q5JVX7 400 aa23.81■■□□□ 1.4
CCS-201ENST00000310190 U2AF1L5P0DN76 240 aaPredicted RBP23.8■■□□□ 1.4
CCS-201ENST00000310190 HMGB2P26583 209 aaKnown RBP23.8■■□□□ 1.4
CCS-201ENST00000310190 U2AF1Q01081 240 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCS-201ENST00000310190 TXNRD1Q16881 649 aa23.8■■□□□ 1.4
CCS-201ENST00000310190 SLC27A3Q5K4L6 730 aa23.8■■□□□ 1.4
CCS-201ENST00000310190 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
CCS-201ENST00000310190 GAS2L2Q8NHY3 880 aa23.79■■□□□ 1.4
CCS-201ENST00000310190 PAPPAQ13219 1627 aa23.78■■□□□ 1.4
CCS-201ENST00000310190 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
CCS-201ENST00000310190 PIGBQ92521 554 aa23.78■■□□□ 1.4
CCS-201ENST00000310190 MRC1P22897 1456 aa23.78■■□□□ 1.4
CCS-201ENST00000310190 ZNF831Q5JPB2 1677 aa23.77■■□□□ 1.4
CCS-201ENST00000310190 PRKAR2BP31323 418 aa23.77■■□□□ 1.4
CCS-201ENST00000310190 SMARCC1Q92922 1105 aaPredicted RBP23.77■■□□□ 1.4
CCS-201ENST00000310190 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
CCS-201ENST00000310190 SYTL4Q96C24 671 aaPredicted RBP23.76■■□□□ 1.39
CCS-201ENST00000310190 PHACTR3Q96KR7 559 aa23.75■■□□□ 1.39
CCS-201ENST00000310190 PLEKHF1Q96S99 279 aa23.75■■□□□ 1.39
CCS-201ENST00000310190 MPRIPQ6WCQ1 1025 aa23.74■■□□□ 1.39
CCS-201ENST00000310190 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
CCS-201ENST00000310190 NBPF14Q5TI25 921 aa23.73■■□□□ 1.39
CCS-201ENST00000310190 MAP3K5Q99683 1374 aa23.73■■□□□ 1.39
CCS-201ENST00000310190 RNMTO43148 476 aaKnown RBP23.72■■□□□ 1.39
CCS-201ENST00000310190 HTATSF1O43719 755 aaKnown RBP23.72■■□□□ 1.39
CCS-201ENST00000310190 CEMIPQ8WUJ3 1361 aa23.72■■□□□ 1.39
CCS-201ENST00000310190 PALLDQ8WX93 1383 aa23.71■■□□□ 1.39
CCS-201ENST00000310190 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
CCS-201ENST00000310190 LRRC4BQ9NT99 713 aa23.71■■□□□ 1.39
CCS-201ENST00000310190 QSER1Q2KHR3 1735 aa23.7■■□□□ 1.38
CCS-201ENST00000310190 CICQ96RK0 1608 aaPredicted RBP23.7■■□□□ 1.38
CCS-201ENST00000310190 TAF1LQ8IZX4 1826 aa23.69■■□□□ 1.38
CCS-201ENST00000310190 SLC52A2Q9HAB3 445 aa23.69■■□□□ 1.38
CCS-201ENST00000310190 SIPA1L3O60292 1781 aaPredicted RBP23.69■■□□□ 1.38
CCS-201ENST00000310190 ANP32CO43423 234 aa23.68■■□□□ 1.38
CCS-201ENST00000310190 CABP4P57796 275 aa23.68■■□□□ 1.38
CCS-201ENST00000310190 LGR6Q9HBX8 967 aa23.68■■□□□ 1.38
CCS-201ENST00000310190 ATG3Q9NT62 314 aa23.68■■□□□ 1.38
CCS-201ENST00000310190 NFATC2IPQ8NCF5 419 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms