RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 PANK1Q8TE04 598 aa13.16□□□□□ -0.3
KDM2A-201ENST00000308783 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
KDM2A-201ENST00000308783 PSME1Q06323 249 aa13.15□□□□□ -0.3
KDM2A-201ENST00000308783 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
KDM2A-201ENST00000308783 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
KDM2A-201ENST00000308783 AMPHP49418 695 aa13.15□□□□□ -0.31
KDM2A-201ENST00000308783 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.31
KDM2A-201ENST00000308783 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.31
KDM2A-201ENST00000308783 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
KDM2A-201ENST00000308783 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
KDM2A-201ENST00000308783 IRX3P78415 501 aaPredicted RBP13.14□□□□□ -0.31
KDM2A-201ENST00000308783 RLBP1P12271 317 aa13.13□□□□□ -0.31
KDM2A-201ENST00000308783 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
KDM2A-201ENST00000308783 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
KDM2A-201ENST00000308783 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
KDM2A-201ENST00000308783 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
KDM2A-201ENST00000308783 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
KDM2A-201ENST00000308783 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
KDM2A-201ENST00000308783 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
KDM2A-201ENST00000308783 EYA1Q99502 592 aa13.11□□□□□ -0.31
KDM2A-201ENST00000308783 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
KDM2A-201ENST00000308783 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
KDM2A-201ENST00000308783 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
KDM2A-201ENST00000308783 MCM10Q7L590 875 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
KDM2A-201ENST00000308783 HOXC9P31274 260 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 TMEM94Q12767 1356 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 ZBTB22O15209 634 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 FLT4P35916 1363 aa13.1□□□□□ -0.31
KDM2A-201ENST00000308783 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
KDM2A-201ENST00000308783 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
KDM2A-201ENST00000308783 SMC4Q9NTJ3 1288 aa13.09□□□□□ -0.31
KDM2A-201ENST00000308783 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
KDM2A-201ENST00000308783 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
KDM2A-201ENST00000308783 IL16Q14005 1332 aa13.07□□□□□ -0.32
KDM2A-201ENST00000308783 CLCN1P35523 988 aa13.07□□□□□ -0.32
KDM2A-201ENST00000308783 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
KDM2A-201ENST00000308783 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
KDM2A-201ENST00000308783 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
KDM2A-201ENST00000308783 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
KDM2A-201ENST00000308783 TPM2P07951 284 aa13.06□□□□□ -0.32
KDM2A-201ENST00000308783 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
KDM2A-201ENST00000308783 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
KDM2A-201ENST00000308783 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
KDM2A-201ENST00000308783 TRIM44Q96DX7 344 aaPredicted RBP13.06□□□□□ -0.32
KDM2A-201ENST00000308783 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
KDM2A-201ENST00000308783 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
KDM2A-201ENST00000308783 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
KDM2A-201ENST00000308783 IGHDP01880 384 aa13.05□□□□□ -0.32
KDM2A-201ENST00000308783 HSP90B1P14625 803 aaKnown RBP13.05□□□□□ -0.32
KDM2A-201ENST00000308783 ATF3P18847 181 aa13.05□□□□□ -0.32
KDM2A-201ENST00000308783 ZBTB9Q96C00 473 aa13.05□□□□□ -0.32
KDM2A-201ENST00000308783 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
KDM2A-201ENST00000308783 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 KDM2BQ8NHM5 1336 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 TRIM27P14373 513 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
KDM2A-201ENST00000308783 GZF1Q9H116 711 aaPredicted RBP13.04□□□□□ -0.32
KDM2A-201ENST00000308783 GCP02774 474 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 FAM193AP78312 1265 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
KDM2A-201ENST00000308783 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 VAMP4O75379 141 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
KDM2A-201ENST00000308783 IFT57Q9NWB7 429 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
KDM2A-201ENST00000308783 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
KDM2A-201ENST00000308783 GNAI1P63096 354 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
KDM2A-201ENST00000308783 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.32
KDM2A-201ENST00000308783 ZKSCAN2Q63HK3 967 aa13.02□□□□□ -0.33
KDM2A-201ENST00000308783 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
KDM2A-201ENST00000308783 LTN1O94822 1766 aa13.02□□□□□ -0.33
KDM2A-201ENST00000308783 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
KDM2A-201ENST00000308783 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
KDM2A-201ENST00000308783 KDRP35968 1356 aa13.02□□□□□ -0.33
KDM2A-201ENST00000308783 MST1RQ04912 1400 aa13.02□□□□□ -0.33
KDM2A-201ENST00000308783 NFAT5O94916 1531 aa13.01□□□□□ -0.33
KDM2A-201ENST00000308783 IP6K1Q92551 441 aa13.01□□□□□ -0.33
KDM2A-201ENST00000308783 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
KDM2A-201ENST00000308783 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
KDM2A-201ENST00000308783 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
KDM2A-201ENST00000308783 RGS22Q8NE09 1264 aa13□□□□□ -0.33
KDM2A-201ENST00000308783 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
KDM2A-201ENST00000308783 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
KDM2A-201ENST00000308783 STRCQ7RTU9 1775 aa13□□□□□ -0.33
KDM2A-201ENST00000308783 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
KDM2A-201ENST00000308783 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms