RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
TMOD3-201ENST00000308580 ZNF396Q96N95 335 aaPredicted RBP11.79□□□□□ -0.52
TMOD3-201ENST00000308580 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 FOXO3O43524 673 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 KIF1BPQ96EK5 621 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 KRT85P78386 507 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 MPNDQ8N594 471 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
TMOD3-201ENST00000308580 CCDC70Q6NSX1 233 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 PDILTQ8N807 584 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
TMOD3-201ENST00000308580 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 FAM83GA6ND36 823 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 ATP10BO94823 1461 aa11.78□□□□□ -0.52
TMOD3-201ENST00000308580 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.52
TMOD3-201ENST00000308580 MNS1Q8NEH6 495 aa11.77□□□□□ -0.52
TMOD3-201ENST00000308580 IGHDP01880 384 aa11.77□□□□□ -0.53
TMOD3-201ENST00000308580 ME1P48163 572 aa11.77□□□□□ -0.53
TMOD3-201ENST00000308580 GPS2Q13227 327 aa11.77□□□□□ -0.53
TMOD3-201ENST00000308580 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 UGGT2Q9NYU1 1516 aa11.77□□□□□ -0.53
TMOD3-201ENST00000308580 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 NSD2O96028 1365 aa11.77□□□□□ -0.53
TMOD3-201ENST00000308580 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 SMC2O95347 1197 aa11.77□□□□□ -0.53
TMOD3-201ENST00000308580 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
TMOD3-201ENST00000308580 SPC24Q8NBT2 197 aa11.76□□□□□ -0.53
TMOD3-201ENST00000308580 NACAP1Q9BZK3 213 aa11.76□□□□□ -0.53
TMOD3-201ENST00000308580 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
TMOD3-201ENST00000308580 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
TMOD3-201ENST00000308580 LRRFIP2Q9Y608 721 aaKnown RBP11.76□□□□□ -0.53
TMOD3-201ENST00000308580 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
TMOD3-201ENST00000308580 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
TMOD3-201ENST00000308580 TNMDQ9H2S6 317 aa11.76□□□□□ -0.53
TMOD3-201ENST00000308580 FLIIQ13045 1269 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 LARP1Q6PKG0 1096 aaKnown RBP11.75□□□□□ -0.53
TMOD3-201ENST00000308580 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 JMYQ8N9B5 988 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
TMOD3-201ENST00000308580 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
TMOD3-201ENST00000308580 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 FERMT3Q86UX7 667 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 KRT32Q14532 448 aa11.75□□□□□ -0.53
TMOD3-201ENST00000308580 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
TMOD3-201ENST00000308580 KDM5BQ9UGL1 1544 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 IKQ13123 557 aaPredicted RBP11.74□□□□□ -0.53
TMOD3-201ENST00000308580 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 PPP6R1Q9UPN7 881 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 MYD88Q99836 296 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 CTNNA3Q9UI47 895 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
TMOD3-201ENST00000308580 IDH1O75874 414 aaKnown RBP11.74□□□□□ -0.53
TMOD3-201ENST00000308580 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 ACEP12821 1306 aa11.74□□□□□ -0.53
TMOD3-201ENST00000308580 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
TMOD3-201ENST00000308580 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
TMOD3-201ENST00000308580 NAP1L1P55209 391 aaKnown RBP11.73□□□□□ -0.53
TMOD3-201ENST00000308580 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
TMOD3-201ENST00000308580 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
TMOD3-201ENST00000308580 PLCH2O75038 1416 aa11.73□□□□□ -0.53
TMOD3-201ENST00000308580 CCDC83Q8IWF9 413 aa11.73□□□□□ -0.53
TMOD3-201ENST00000308580 TESK2Q96S53 571 aa11.73□□□□□ -0.53
TMOD3-201ENST00000308580 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
TMOD3-201ENST00000308580 KLHL34Q8N239 644 aa11.73□□□□□ -0.53
TMOD3-201ENST00000308580 PRAG1Q86YV5 1406 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 IL16Q14005 1332 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 PTPRCP08575 1304 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
TMOD3-201ENST00000308580 HSP90AB2PQ58FF8 381 aa11.72□□□□□ -0.53
TMOD3-201ENST00000308580 TDO2P48775 406 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 ARGLU1Q9NWB6 273 aaPredicted RBP11.71□□□□□ -0.53
TMOD3-201ENST00000308580 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 STARD3NLO95772 234 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 OFD1O75665 1012 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 TXLNAP40222 546 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
TMOD3-201ENST00000308580 METTL24Q5JXM2 366 aa11.71□□□□□ -0.54
TMOD3-201ENST00000308580 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.54
TMOD3-201ENST00000308580 SYCE3A1L190 88 aa11.71□□□□□ -0.54
TMOD3-201ENST00000308580 RAI14Q9P0K7 980 aa11.71□□□□□ -0.54
TMOD3-201ENST00000308580 CFAP45Q9UL16 551 aa11.71□□□□□ -0.54
TMOD3-201ENST00000308580 RAPGEF6Q8TEU7 1601 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms