RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 EXOSC9Q06265 439 aaKnown RBP9.48□□□□□ -0.89
CDC40-201ENST00000307731 MTHFSDQ2M296 383 aaKnown RBP9.48□□□□□ -0.89
CDC40-201ENST00000307731 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
CDC40-201ENST00000307731 ZCRB1Q8TBF4 217 aaKnown RBP9.48□□□□□ -0.89
CDC40-201ENST00000307731 USP32Q8NFA0 1604 aa9.48□□□□□ -0.89
CDC40-201ENST00000307731 ERBB3P21860 1342 aa9.48□□□□□ -0.89
CDC40-201ENST00000307731 LARP1Q6PKG0 1096 aaKnown RBP9.47□□□□□ -0.89
CDC40-201ENST00000307731 USP19O94966 1318 aa9.47□□□□□ -0.89
CDC40-201ENST00000307731 JCADQ9P266 1359 aa9.46□□□□□ -0.89
CDC40-201ENST00000307731 HSPA1LP34931 641 aa9.46□□□□□ -0.89
CDC40-201ENST00000307731 CLUAP1Q96AJ1 413 aa9.46□□□□□ -0.89
CDC40-201ENST00000307731 SLFN5Q08AF3 891 aa9.46□□□□□ -0.9
CDC40-201ENST00000307731 MIS18AQ9NYP9 233 aa9.46□□□□□ -0.9
CDC40-201ENST00000307731 USP21Q9UK80 565 aa9.46□□□□□ -0.9
CDC40-201ENST00000307731 IGSF1Q8N6C5 1336 aa9.46□□□□□ -0.9
CDC40-201ENST00000307731 MAP2P11137 1827 aaKnown RBP9.46□□□□□ -0.9
CDC40-201ENST00000307731 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
CDC40-201ENST00000307731 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
CDC40-201ENST00000307731 BLMP54132 1417 aaPredicted RBP9.45□□□□□ -0.9
CDC40-201ENST00000307731 DDB1Q16531 1140 aa9.45□□□□□ -0.9
CDC40-201ENST00000307731 TWISTNBQ3B726 338 aaPredicted RBP9.45□□□□□ -0.9
CDC40-201ENST00000307731 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
CDC40-201ENST00000307731 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
CDC40-201ENST00000307731 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
CDC40-201ENST00000307731 TAF7Q15545 349 aaPredicted RBP9.45□□□□□ -0.9
CDC40-201ENST00000307731 PLIN1O60240 522 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 RBM42Q9BTD8 480 aaKnown RBP9.44□□□□□ -0.9
CDC40-201ENST00000307731 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 MAP3K5Q99683 1374 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 SLC4A10Q6U841 1118 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 SSH2Q76I76 1423 aa9.44□□□□□ -0.9
CDC40-201ENST00000307731 PNPLA6Q8IY17 1366 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
CDC40-201ENST00000307731 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 FANCIQ9NVI1 1328 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 ITPRIPQ8IWB1 547 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 PCDH11XQ9BZA7 1347 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 PCDH11YQ9BZA8 1340 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 RRP1P56182 461 aaKnown RBP9.43□□□□□ -0.9
CDC40-201ENST00000307731 ZKSCAN2Q63HK3 967 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
CDC40-201ENST00000307731 CHMP4BQ9H444 224 aaKnown RBP9.43□□□□□ -0.9
CDC40-201ENST00000307731 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
CDC40-201ENST00000307731 HDGFL1Q5TGJ6 251 aa9.42□□□□□ -0.9
CDC40-201ENST00000307731 HTATSF1O43719 755 aaKnown RBP9.42□□□□□ -0.9
CDC40-201ENST00000307731 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
CDC40-201ENST00000307731 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
CDC40-201ENST00000307731 TOPAZ1Q8N9V7 1692 aa9.42□□□□□ -0.9
CDC40-201ENST00000307731 IL16Q14005 1332 aa9.42□□□□□ -0.9
CDC40-201ENST00000307731 KIF16BQ96L93 1317 aa9.42□□□□□ -0.9
CDC40-201ENST00000307731 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
CDC40-201ENST00000307731 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 NPHP1O15259 732 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 FKBP5Q13451 457 aaPredicted RBP9.41□□□□□ -0.9
CDC40-201ENST00000307731 CCDC30Q5VVM6 783 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 PLEKHF1Q96S99 279 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 STRCP1A6NGW2 1772 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 SPATA31A6Q5VVP1 1343 aa9.41□□□□□ -0.9
CDC40-201ENST00000307731 MAPK8IP2Q13387 824 aaPredicted RBP9.41□□□□□ -0.9
CDC40-201ENST00000307731 CT47B1P0C2W7 299 aaPredicted RBP9.4□□□□□ -0.9
CDC40-201ENST00000307731 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
CDC40-201ENST00000307731 TRIM35Q9UPQ4 493 aa9.4□□□□□ -0.9
CDC40-201ENST00000307731 RNMTO43148 476 aaKnown RBP9.4□□□□□ -0.9
CDC40-201ENST00000307731 ANKRD26Q9UPS8 1709 aa9.4□□□□□ -0.9
CDC40-201ENST00000307731 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.91
CDC40-201ENST00000307731 ACSBG1Q96GR2 724 aa9.4□□□□□ -0.91
CDC40-201ENST00000307731 API5Q9BZZ5 524 aaKnown RBP9.4□□□□□ -0.91
CDC40-201ENST00000307731 PIK3C2AO00443 1686 aa9.4□□□□□ -0.91
CDC40-201ENST00000307731 BCAR3O75815 825 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 PXDNQ92626 1479 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 AIMP1Q12904 312 aaKnown RBP9.39□□□□□ -0.91
CDC40-201ENST00000307731 LGR6Q9HBX8 967 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
CDC40-201ENST00000307731 AFF2P51816 1311 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 ROBO1Q9Y6N7 1651 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 CPDO75976 1380 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 SLC39A6Q13433 755 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 PPP4R2Q9NY27 417 aa9.39□□□□□ -0.91
CDC40-201ENST00000307731 DDX58O95786 925 aaKnown RBP9.38□□□□□ -0.91
CDC40-201ENST00000307731 NFATC2IPQ8NCF5 419 aa9.38□□□□□ -0.91
CDC40-201ENST00000307731 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
CDC40-201ENST00000307731 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
CDC40-201ENST00000307731 DZIP1LQ8IYY4 767 aaKnown RBP9.38□□□□□ -0.91
CDC40-201ENST00000307731 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
CDC40-201ENST00000307731 PHKG2P15735 406 aa9.38□□□□□ -0.91
CDC40-201ENST00000307731 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
CDC40-201ENST00000307731 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
CDC40-201ENST00000307731 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
CDC40-201ENST00000307731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.914e-6■■■□□ 19.1
CDC40-201ENST00000307731 B4GALNT3Q6L9W6 998 aa9.37□□□□□ -0.91
CDC40-201ENST00000307731 CRB1P82279 1406 aa9.37□□□□□ -0.91
CDC40-201ENST00000307731 NEXNQ0ZGT2 675 aa9.37□□□□□ -0.91
CDC40-201ENST00000307731 CRBNQ96SW2 442 aa9.37□□□□□ -0.91
CDC40-201ENST00000307731 PHLPP1O60346 1717 aa9.36□□□□□ -0.91
CDC40-201ENST00000307731 MYL6BP14649 208 aa9.36□□□□□ -0.91
CDC40-201ENST00000307731 IL17REQ8NFR9 667 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms