RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 GLI2P10070 1586 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 GORABQ5T7V8 394 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
PCDHGC4-201ENST00000306593 MRE11P49959 708 aa13.24□□□□□ -0.29
PCDHGC4-201ENST00000306593 NOL8Q76FK4 1167 aaKnown RBP13.24□□□□□ -0.29
PCDHGC4-201ENST00000306593 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
PCDHGC4-201ENST00000306593 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
PCDHGC4-201ENST00000306593 HIP1O00291 1037 aa13.24□□□□□ -0.29
PCDHGC4-201ENST00000306593 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 FAM83GA6ND36 823 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 FBLN1P23142 703 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 FAM135BQ49AJ0 1406 aa13.23□□□□□ -0.29
PCDHGC4-201ENST00000306593 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 PHACTR3Q96KR7 559 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 QRICH2Q9H0J4 1663 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 MCM4P33991 863 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 NRXN1Q9ULB1 1477 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 DNTTIP2Q5QJE6 756 aaKnown RBP13.22□□□□□ -0.29
PCDHGC4-201ENST00000306593 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
PCDHGC4-201ENST00000306593 PLEKHF1Q96S99 279 aa13.21□□□□□ -0.29
PCDHGC4-201ENST00000306593 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
PCDHGC4-201ENST00000306593 TNNQ9UQP3 1299 aa13.21□□□□□ -0.29
PCDHGC4-201ENST00000306593 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
PCDHGC4-201ENST00000306593 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.3
PCDHGC4-201ENST00000306593 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 ANKRD44Q8N8A2 993 aa13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 AEBP2Q6ZN18 517 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 NEK4P51957 841 aa13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 FLIIQ13045 1269 aa13.2□□□□□ -0.3
PCDHGC4-201ENST00000306593 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 ZC3H13Q5T200 1668 aaKnown RBP13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 MED14O60244 1454 aa13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 CLSTN1O94985 981 aa13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 EVA1CP58658 441 aa13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 SBNO1A3KN83 1393 aa13.19□□□□□ -0.3
PCDHGC4-201ENST00000306593 MX1P20591 662 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 PSMA5P28066 241 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 MBD3O95983 291 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 MCTP1Q6DN14 999 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 TBC1D9Q6ZT07 1266 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 DIP2CQ9Y2E4 1556 aa13.18□□□□□ -0.3
PCDHGC4-201ENST00000306593 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 SRGAP3O43295 1099 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 NRDCO43847 1150 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 SNX21Q969T3 373 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 DCTPP1Q9H773 170 aa13.17□□□□□ -0.3
PCDHGC4-201ENST00000306593 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
PCDHGC4-201ENST00000306593 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC4-201ENST00000306593 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC4-201ENST00000306593 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
PCDHGC4-201ENST00000306593 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
PCDHGC4-201ENST00000306593 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
PCDHGC4-201ENST00000306593 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 CHL1O00533 1208 aa13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 F6X3S4 739 aa13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 MTHFSDQ2M296 383 aaKnown RBP13.15□□□□□ -0.3
PCDHGC4-201ENST00000306593 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 A2ML1A8K2U0 1454 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 DNAAF4Q8WXU2 420 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 NLRP1Q9C000 1473 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 METP08581 1390 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
PCDHGC4-201ENST00000306593 MAP3K5Q99683 1374 aa13.13□□□□□ -0.31
PCDHGC4-201ENST00000306593 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
PCDHGC4-201ENST00000306593 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
PCDHGC4-201ENST00000306593 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
PCDHGC4-201ENST00000306593 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
PCDHGC4-201ENST00000306593 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms