RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 ZCRB1Q8TBF4 217 aaKnown RBP24.74■■□□□ 1.55
SPSB3-201ENST00000301717 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
SPSB3-201ENST00000301717 EZH2Q15910 746 aaKnown RBP24.72■■□□□ 1.55
SPSB3-201ENST00000301717 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
SPSB3-201ENST00000301717 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.55
SPSB3-201ENST00000301717 IGSF1Q8N6C5 1336 aa24.7■■□□□ 1.54
SPSB3-201ENST00000301717 BCL9O00512 1426 aa24.7■■□□□ 1.54
SPSB3-201ENST00000301717 IL13P35225 146 aa24.69■■□□□ 1.54
SPSB3-201ENST00000301717 SBF2Q86WG5 1849 aa24.69■■□□□ 1.54
SPSB3-201ENST00000301717 CAMKK2Q96RR4 588 aa24.68■■□□□ 1.54
SPSB3-201ENST00000301717 BCL11BQ9C0K0 894 aaPredicted RBP24.68■■□□□ 1.54
SPSB3-201ENST00000301717 CYP27B1O15528 508 aa24.66■■□□□ 1.54
SPSB3-201ENST00000301717 PPP2R1AP30153 589 aa24.64■■□□□ 1.54
SPSB3-201ENST00000301717 SULT6B1Q6IMI4 303 aa24.64■■□□□ 1.54
SPSB3-201ENST00000301717 COL3A1P02461 1466 aaPredicted RBP24.63■■□□□ 1.53
SPSB3-201ENST00000301717 PCDH11XQ9BZA7 1347 aa24.62■■□□□ 1.53
SPSB3-201ENST00000301717 PCDH11YQ9BZA8 1340 aa24.62■■□□□ 1.53
SPSB3-201ENST00000301717 DIAPH1O60610 1272 aaKnown RBP24.61■■□□□ 1.53
SPSB3-201ENST00000301717 HMOX1P09601 288 aa24.61■■□□□ 1.53
SPSB3-201ENST00000301717 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
SPSB3-201ENST00000301717 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
SPSB3-201ENST00000301717 NHSQ6T4R5 1651 aa24.61■■□□□ 1.53
SPSB3-201ENST00000301717 PKD1L3Q7Z443 1732 aa24.61■■□□□ 1.53
SPSB3-201ENST00000301717 DOT1LQ8TEK3 1739 aa24.59■■□□□ 1.53
SPSB3-201ENST00000301717 SPG7Q9UQ90 795 aa24.59■■□□□ 1.53
SPSB3-201ENST00000301717 PARD3Q8TEW0 1356 aa24.57■■□□□ 1.52
SPSB3-201ENST00000301717 PSDA5PKW4 1024 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-201ENST00000301717 PROM2Q8N271 834 aa24.57■■□□□ 1.52
SPSB3-201ENST00000301717 SRCAPQ6ZRS2 3230 aa24.57■■□□□ 1.52
SPSB3-201ENST00000301717 KDRP35968 1356 aa24.57■■□□□ 1.52
SPSB3-201ENST00000301717 KAT6BQ8WYB5 2073 aa24.56■■□□□ 1.52
SPSB3-201ENST00000301717 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
SPSB3-201ENST00000301717 PLSCR1O15162 318 aa24.56■■□□□ 1.52
SPSB3-201ENST00000301717 PHKG2P15735 406 aa24.54■■□□□ 1.52
SPSB3-201ENST00000301717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.54■■□□□ 1.52
SPSB3-201ENST00000301717 BTAF1O14981 1849 aa24.54■■□□□ 1.52
SPSB3-201ENST00000301717 RREB1Q92766 1687 aa24.54■■□□□ 1.52
SPSB3-201ENST00000301717 TOGARAM1Q9Y4F4 1720 aa24.53■■□□□ 1.52
SPSB3-201ENST00000301717 NUP188Q5SRE5 1749 aa24.52■■□□□ 1.52
SPSB3-201ENST00000301717 R3HDM1Q15032 1099 aaKnown RBP24.52■■□□□ 1.52
SPSB3-201ENST00000301717 TXNRD1Q16881 649 aa24.52■■□□□ 1.52
SPSB3-201ENST00000301717 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
SPSB3-201ENST00000301717 ZNF530Q6P9A1 599 aaPredicted RBP24.52■■□□□ 1.52
SPSB3-201ENST00000301717 IFNL2Q8IZJ0 200 aa24.52■■□□□ 1.52
SPSB3-201ENST00000301717 MPRIPQ6WCQ1 1025 aa24.51■■□□□ 1.51
SPSB3-201ENST00000301717 CFAP53Q96M91 514 aa24.51■■□□□ 1.51
SPSB3-201ENST00000301717 ZNF316A6NFI3 1004 aaPredicted RBP24.5■■□□□ 1.51
SPSB3-201ENST00000301717 NKX1-1Q15270 411 aaPredicted RBP24.5■■□□□ 1.51
SPSB3-201ENST00000301717 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
SPSB3-201ENST00000301717 KCNQ4P56696 695 aa24.49■■□□□ 1.51
SPSB3-201ENST00000301717 RGPD3A6NKT7 1758 aaPredicted RBP24.47■■□□□ 1.51
SPSB3-201ENST00000301717 RGPD4Q7Z3J3 1758 aa24.47■■□□□ 1.51
SPSB3-201ENST00000301717 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
SPSB3-201ENST00000301717 LRRC4BQ9NT99 713 aa24.46■■□□□ 1.51
SPSB3-201ENST00000301717 PIGBQ92521 554 aa24.45■■□□□ 1.51
SPSB3-201ENST00000301717 PLEKHG2Q9H7P9 1386 aa24.45■■□□□ 1.5
SPSB3-201ENST00000301717 KDM6AO15550 1401 aaPredicted RBP24.45■■□□□ 1.5
SPSB3-201ENST00000301717 MTHFSDQ2M296 383 aaKnown RBP24.44■■□□□ 1.5
SPSB3-201ENST00000301717 U2AF1L5P0DN76 240 aaPredicted RBP24.44■■□□□ 1.5
SPSB3-201ENST00000301717 U2AF1Q01081 240 aaKnown RBP eCLIP24.44■■□□□ 1.5
SPSB3-201ENST00000301717 RALBP1Q15311 655 aa24.44■■□□□ 1.5
SPSB3-201ENST00000301717 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
SPSB3-201ENST00000301717 ITGB4P16144 1822 aa24.41■■□□□ 1.5
SPSB3-201ENST00000301717 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
SPSB3-201ENST00000301717 NBPF14Q5TI25 921 aa24.41■■□□□ 1.5
SPSB3-201ENST00000301717 PHACTR3Q96KR7 559 aa24.41■■□□□ 1.5
SPSB3-201ENST00000301717 RSPH6AQ9H0K4 717 aa24.41■■□□□ 1.5
SPSB3-201ENST00000301717 NUDCQ9Y266 331 aa24.41■■□□□ 1.5
SPSB3-201ENST00000301717 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
SPSB3-201ENST00000301717 TMOD3Q9NYL9 352 aa24.4■■□□□ 1.5
SPSB3-201ENST00000301717 ASAP1Q9ULH1 1129 aa24.39■■□□□ 1.5
SPSB3-201ENST00000301717 PALLDQ8WX93 1383 aa24.38■■□□□ 1.49
SPSB3-201ENST00000301717 MYBBP1AQ9BQG0 1328 aaKnown RBP24.38■■□□□ 1.49
SPSB3-201ENST00000301717 PDGFDQ9GZP0 370 aaPredicted RBP24.38■■□□□ 1.49
SPSB3-201ENST00000301717 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
SPSB3-201ENST00000301717 HSP90AB1P08238 724 aaKnown RBP24.37■■□□□ 1.49
SPSB3-201ENST00000301717 ZNF827Q17R98 1081 aa24.37■■□□□ 1.49
SPSB3-201ENST00000301717 AKAP4Q5JQC9 854 aa24.37■■□□□ 1.49
SPSB3-201ENST00000301717 LGR6Q9HBX8 967 aa24.37■■□□□ 1.49
SPSB3-201ENST00000301717 CCNL1Q9UK58 526 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-201ENST00000301717 PAPPAQ13219 1627 aa24.35■■□□□ 1.49
SPSB3-201ENST00000301717 ERVV-2B6SEH9 535 aa24.35■■□□□ 1.49
SPSB3-201ENST00000301717 CABP4P57796 275 aa24.35■■□□□ 1.49
SPSB3-201ENST00000301717 ATG3Q9NT62 314 aa24.35■■□□□ 1.49
SPSB3-201ENST00000301717 STK32BQ9NY57 414 aa24.35■■□□□ 1.49
SPSB3-201ENST00000301717 LY75O60449 1722 aa24.34■■□□□ 1.49
SPSB3-201ENST00000301717 SLC15A2Q16348 729 aa24.34■■□□□ 1.49
SPSB3-201ENST00000301717 SLC27A3Q5K4L6 730 aa24.34■■□□□ 1.49
SPSB3-201ENST00000301717 NFATC2IPQ8NCF5 419 aa24.33■■□□□ 1.49
SPSB3-201ENST00000301717 RNMTO43148 476 aaKnown RBP24.32■■□□□ 1.48
SPSB3-201ENST00000301717 FCHSD2O94868 740 aa24.31■■□□□ 1.48
SPSB3-201ENST00000301717 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
SPSB3-201ENST00000301717 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
SPSB3-201ENST00000301717 AKT1S1Q96B36 256 aa24.3■■□□□ 1.48
SPSB3-201ENST00000301717 MAP3K5Q99683 1374 aa24.29■■□□□ 1.48
SPSB3-201ENST00000301717 LOC102724428A0A0B4J2F2 783 aa24.28■■□□□ 1.48
SPSB3-201ENST00000301717 SIK1P57059 783 aa24.28■■□□□ 1.48
SPSB3-201ENST00000301717 IL17REQ8NFR9 667 aa24.27■■□□□ 1.48
SPSB3-201ENST00000301717 SLC4A9Q96Q91 983 aa24.27■■□□□ 1.48
SPSB3-201ENST00000301717 SLC52A2Q9HAB3 445 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms