RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ANKRD45Q5TZF3 282 aa18.4■□□□□ 0.54
SMG8-201ENST00000300917 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
SMG8-201ENST00000300917 G2E3Q7L622 706 aa18.4■□□□□ 0.54
SMG8-201ENST00000300917 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
SMG8-201ENST00000300917 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
SMG8-201ENST00000300917 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
SMG8-201ENST00000300917 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
SMG8-201ENST00000300917 ARHGEF10O15013 1369 aa18.38■□□□□ 0.53
SMG8-201ENST00000300917 ANKARQ7Z5J8 1434 aa18.38■□□□□ 0.53
SMG8-201ENST00000300917 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
SMG8-201ENST00000300917 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
SMG8-201ENST00000300917 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
SMG8-201ENST00000300917 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
SMG8-201ENST00000300917 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
SMG8-201ENST00000300917 IL17REQ8NFR9 667 aa18.36■□□□□ 0.53
SMG8-201ENST00000300917 MFAP1P55081 439 aaKnown RBP18.35■□□□□ 0.53
SMG8-201ENST00000300917 SIRT2Q8IXJ6 389 aa18.35■□□□□ 0.53
SMG8-201ENST00000300917 GCP02774 474 aa18.35■□□□□ 0.53
SMG8-201ENST00000300917 DDRGK1Q96HY6 314 aa18.35■□□□□ 0.53
SMG8-201ENST00000300917 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 NALCNQ8IZF0 1738 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 ARHGAP45Q92619 1136 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 CRB1P82279 1406 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 ABCC4O15439 1325 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
SMG8-201ENST00000300917 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
SMG8-201ENST00000300917 IP6K1Q92551 441 aa18.33■□□□□ 0.52
SMG8-201ENST00000300917 USP19O94966 1318 aa18.33■□□□□ 0.52
SMG8-201ENST00000300917 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
SMG8-201ENST00000300917 MEIS3Q99687 375 aa18.33■□□□□ 0.52
SMG8-201ENST00000300917 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
SMG8-201ENST00000300917 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
SMG8-201ENST00000300917 KDRP35968 1356 aa18.32■□□□□ 0.52
SMG8-201ENST00000300917 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
SMG8-201ENST00000300917 AXIN2Q9Y2T1 843 aa18.31■□□□□ 0.52
SMG8-201ENST00000300917 SPRYD3Q8NCJ5 442 aa18.31■□□□□ 0.52
SMG8-201ENST00000300917 ATF3P18847 181 aa18.3■□□□□ 0.52
SMG8-201ENST00000300917 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
SMG8-201ENST00000300917 NUCB1Q02818 461 aa18.3■□□□□ 0.52
SMG8-201ENST00000300917 FKBP5Q13451 457 aaPredicted RBP18.3■□□□□ 0.52
SMG8-201ENST00000300917 STK31Q9BXU1 1019 aa18.3■□□□□ 0.52
SMG8-201ENST00000300917 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
SMG8-201ENST00000300917 KCNQ3O43525 872 aa18.29■□□□□ 0.52
SMG8-201ENST00000300917 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
SMG8-201ENST00000300917 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
SMG8-201ENST00000300917 ANXA1P04083 346 aa18.29■□□□□ 0.52
SMG8-201ENST00000300917 MSH6P52701 1360 aa18.28■□□□□ 0.52
SMG8-201ENST00000300917 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
SMG8-201ENST00000300917 KCNH5Q8NCM2 988 aa18.28■□□□□ 0.52
SMG8-201ENST00000300917 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
SMG8-201ENST00000300917 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
SMG8-201ENST00000300917 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
SMG8-201ENST00000300917 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.52
SMG8-201ENST00000300917 MAP3K5Q99683 1374 aa18.27■□□□□ 0.52
SMG8-201ENST00000300917 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.51
SMG8-201ENST00000300917 CHRNA2Q15822 529 aa18.27■□□□□ 0.51
SMG8-201ENST00000300917 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
SMG8-201ENST00000300917 TMEM94Q12767 1356 aa18.26■□□□□ 0.51
SMG8-201ENST00000300917 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
SMG8-201ENST00000300917 RGPD1P0DJD0 1748 aa18.25■□□□□ 0.51
SMG8-201ENST00000300917 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
SMG8-201ENST00000300917 CHMP4BQ9H444 224 aaKnown RBP18.25■□□□□ 0.51
SMG8-201ENST00000300917 PHAXQ9H814 394 aaKnown RBP18.25■□□□□ 0.51
SMG8-201ENST00000300917 KIAA0232Q92628 1395 aa18.24■□□□□ 0.51
SMG8-201ENST00000300917 TEFQ10587 303 aa18.24■□□□□ 0.51
SMG8-201ENST00000300917 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
SMG8-201ENST00000300917 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
SMG8-201ENST00000300917 NLRP2Q9NX02 1062 aa18.24■□□□□ 0.51
SMG8-201ENST00000300917 FLIIQ13045 1269 aa18.24■□□□□ 0.51
SMG8-201ENST00000300917 HDGFL1Q5TGJ6 251 aa18.24■□□□□ 0.51
SMG8-201ENST00000300917 CSB-PGBD3P0DP91 1061 aa18.22■□□□□ 0.51
SMG8-201ENST00000300917 RGS12O14924 1447 aa18.22■□□□□ 0.51
SMG8-201ENST00000300917 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
SMG8-201ENST00000300917 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
SMG8-201ENST00000300917 CEP85Q6P2H3 762 aa18.21■□□□□ 0.51
SMG8-201ENST00000300917 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
SMG8-201ENST00000300917 NWD1Q149M9 1564 aa18.21■□□□□ 0.51
SMG8-201ENST00000300917 PTPRCP08575 1304 aa18.21■□□□□ 0.51
SMG8-201ENST00000300917 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
SMG8-201ENST00000300917 TBC1D32Q96NH3 1257 aa18.2■□□□□ 0.5
SMG8-201ENST00000300917 C22orf23Q9BZE7 217 aa18.2■□□□□ 0.5
SMG8-201ENST00000300917 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
SMG8-201ENST00000300917 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
SMG8-201ENST00000300917 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
SMG8-201ENST00000300917 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
SMG8-201ENST00000300917 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
SMG8-201ENST00000300917 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
SMG8-201ENST00000300917 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
SMG8-201ENST00000300917 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
SMG8-201ENST00000300917 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
SMG8-201ENST00000300917 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
SMG8-201ENST00000300917 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
SMG8-201ENST00000300917 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
SMG8-201ENST00000300917 LTN1O94822 1766 aa18.17■□□□□ 0.5
SMG8-201ENST00000300917 NFAT5O94916 1531 aa18.17■□□□□ 0.5
SMG8-201ENST00000300917 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
SMG8-201ENST00000300917 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms