RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MTHFSDQ2M296 383 aaKnown RBP16.07■□□□□ 0.16
HIF3A-204ENST00000300862 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
HIF3A-204ENST00000300862 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
HIF3A-204ENST00000300862 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
HIF3A-204ENST00000300862 PLEKHM2Q8IWE5 1019 aa16.06■□□□□ 0.16
HIF3A-204ENST00000300862 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
HIF3A-204ENST00000300862 MEIS3Q99687 375 aa16.06■□□□□ 0.16
HIF3A-204ENST00000300862 SMARCA5O60264 1052 aaPredicted RBP16.06■□□□□ 0.16
HIF3A-204ENST00000300862 DCTPP1Q9H773 170 aa16.06■□□□□ 0.16
HIF3A-204ENST00000300862 PLEKHG1Q9ULL1 1385 aa16.06■□□□□ 0.16
HIF3A-204ENST00000300862 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
HIF3A-204ENST00000300862 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
HIF3A-204ENST00000300862 RGS12O14924 1447 aa16.05■□□□□ 0.16
HIF3A-204ENST00000300862 F6X3S4 739 aa16.05■□□□□ 0.16
HIF3A-204ENST00000300862 HSP90AB1P08238 724 aaKnown RBP16.05■□□□□ 0.16
HIF3A-204ENST00000300862 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
HIF3A-204ENST00000300862 G2E3Q7L622 706 aa16.05■□□□□ 0.16
HIF3A-204ENST00000300862 RRAGDQ9NQL2 400 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-204ENST00000300862 MSH6P52701 1360 aa16.05■□□□□ 0.16
HIF3A-204ENST00000300862 AMPHP49418 695 aa16.04■□□□□ 0.16
HIF3A-204ENST00000300862 CEP85Q6P2H3 762 aa16.04■□□□□ 0.16
HIF3A-204ENST00000300862 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
HIF3A-204ENST00000300862 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
HIF3A-204ENST00000300862 ANKRD44Q8N8A2 993 aa16.03■□□□□ 0.16
HIF3A-204ENST00000300862 SNX21Q969T3 373 aa16.03■□□□□ 0.16
HIF3A-204ENST00000300862 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
HIF3A-204ENST00000300862 CDC45O75419 566 aa16.03■□□□□ 0.16
HIF3A-204ENST00000300862 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
HIF3A-204ENST00000300862 EYA1Q99502 592 aa16.03■□□□□ 0.16
HIF3A-204ENST00000300862 CRB1P82279 1406 aa16.02■□□□□ 0.16
HIF3A-204ENST00000300862 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
HIF3A-204ENST00000300862 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
HIF3A-204ENST00000300862 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
HIF3A-204ENST00000300862 TRAK2O60296 914 aa16.01■□□□□ 0.15
HIF3A-204ENST00000300862 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
HIF3A-204ENST00000300862 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
HIF3A-204ENST00000300862 DDIT3P35638 169 aa16.01■□□□□ 0.15
HIF3A-204ENST00000300862 RIMS1Q86UR5 1692 aaKnown RBP16.01■□□□□ 0.15
HIF3A-204ENST00000300862 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
HIF3A-204ENST00000300862 KIAA0232Q92628 1395 aa16.01■□□□□ 0.15
HIF3A-204ENST00000300862 NLRP6P59044 892 aa16■□□□□ 0.15
HIF3A-204ENST00000300862 TTC22Q5TAA0 569 aa16■□□□□ 0.15
HIF3A-204ENST00000300862 LTV1Q96GA3 475 aaPredicted RBP16■□□□□ 0.15
HIF3A-204ENST00000300862 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
HIF3A-204ENST00000300862 L1TD1Q5T7N2 865 aaKnown RBP16■□□□□ 0.15
HIF3A-204ENST00000300862 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
HIF3A-204ENST00000300862 TOPAZ1Q8N9V7 1692 aa16■□□□□ 0.15
HIF3A-204ENST00000300862 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
HIF3A-204ENST00000300862 PTPRCP08575 1304 aa15.99■□□□□ 0.15
HIF3A-204ENST00000300862 NCOA3Q9Y6Q9 1424 aa15.99■□□□□ 0.15
HIF3A-204ENST00000300862 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
HIF3A-204ENST00000300862 FLT4P35916 1363 aa15.98■□□□□ 0.15
HIF3A-204ENST00000300862 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
HIF3A-204ENST00000300862 ARHGEF10O15013 1369 aa15.98■□□□□ 0.15
HIF3A-204ENST00000300862 SDSP20132 328 aa15.97■□□□□ 0.15
HIF3A-204ENST00000300862 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
HIF3A-204ENST00000300862 CEP170BQ9Y4F5 1589 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-204ENST00000300862 K7ELQ4 463 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-204ENST00000300862 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
HIF3A-204ENST00000300862 TBX22Q9Y458 520 aa15.97■□□□□ 0.15
HIF3A-204ENST00000300862 RGPD1P0DJD0 1748 aa15.96■□□□□ 0.15
HIF3A-204ENST00000300862 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
HIF3A-204ENST00000300862 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
HIF3A-204ENST00000300862 KCNA6P17658 529 aa15.96■□□□□ 0.15
HIF3A-204ENST00000300862 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
HIF3A-204ENST00000300862 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 GOLGA6L3A6NEY3 463 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 XRCC6P12956 609 aaKnown RBP eCLIP15.95■□□□□ 0.14
HIF3A-204ENST00000300862 USHBP1Q8N6Y0 703 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 PANK2Q9BZ23 570 aa15.95■□□□□ 0.14
HIF3A-204ENST00000300862 EXOC6BQ9Y2D4 811 aa15.94■□□□□ 0.14
HIF3A-204ENST00000300862 KDRP35968 1356 aa15.94■□□□□ 0.14
HIF3A-204ENST00000300862 RAB3GAP1Q15042 981 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 ABTB2Q8N961 1025 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 USP26Q9BXU7 913 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 HOXC9P31274 260 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 FKBP5Q13451 457 aaPredicted RBP15.93■□□□□ 0.14
HIF3A-204ENST00000300862 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 DIP2AQ14689 1571 aa15.93■□□□□ 0.14
HIF3A-204ENST00000300862 SSFA2P28290 1259 aa15.92■□□□□ 0.14
HIF3A-204ENST00000300862 GNAT3A8MTJ3 354 aa15.92■□□□□ 0.14
HIF3A-204ENST00000300862 THEMISQ8N1K5 641 aaPredicted RBP15.92■□□□□ 0.14
HIF3A-204ENST00000300862 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
HIF3A-204ENST00000300862 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
HIF3A-204ENST00000300862 FLIIQ13045 1269 aa15.91■□□□□ 0.14
HIF3A-204ENST00000300862 HMMRO75330 724 aa15.91■□□□□ 0.14
HIF3A-204ENST00000300862 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-204ENST00000300862 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
HIF3A-204ENST00000300862 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
HIF3A-204ENST00000300862 GNAI2P04899 355 aa15.9■□□□□ 0.14
HIF3A-204ENST00000300862 PKNOX2Q96KN3 472 aa15.9■□□□□ 0.14
HIF3A-204ENST00000300862 GBP4Q96PP9 640 aa15.89■□□□□ 0.13
HIF3A-204ENST00000300862 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
HIF3A-204ENST00000300862 FMN2Q9NZ56 1722 aa15.89■□□□□ 0.13
HIF3A-204ENST00000300862 PDE1AP54750 535 aa15.89■□□□□ 0.13
HIF3A-204ENST00000300862 RABEP1Q15276 862 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms