RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 REC8O95072 547 aa12.44□□□□□ -0.42
GABRB3-201ENST00000299267 NUTM1Q86Y26 1132 aa12.44□□□□□ -0.42
GABRB3-201ENST00000299267 POLR3AO14802 1390 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-201ENST00000299267 ROBO2Q9HCK4 1378 aa12.44□□□□□ -0.42
GABRB3-201ENST00000299267 RAD21O60216 631 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 ERC2O15083 957 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 FMNL2Q96PY5 1086 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 LRRFIP2Q9Y608 721 aaKnown RBP12.43□□□□□ -0.42
GABRB3-201ENST00000299267 IP6K1Q92551 441 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 LRRCC1Q9C099 1032 aa12.43□□□□□ -0.42
GABRB3-201ENST00000299267 DBF4Q9UBU7 674 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-201ENST00000299267 HECW2Q9P2P5 1572 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 RUFY2Q8WXA3 655 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 IL13P35225 146 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
GABRB3-201ENST00000299267 CHD1LQ86WJ1 897 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
GABRB3-201ENST00000299267 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-201ENST00000299267 AACSQ86V21 672 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 MAP3K2Q9Y2U5 619 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 RLBP1P12271 317 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 ALDH1L2Q3SY69 923 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 A0A087WZG4 1122 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
GABRB3-201ENST00000299267 AAMPQ13685 434 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 MPHOSPH8Q99549 860 aa12.41□□□□□ -0.42
GABRB3-201ENST00000299267 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 KDM4AO75164 1064 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 IGHDP01880 384 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
GABRB3-201ENST00000299267 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 ERVK-7P63135 1459 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 ZNF335Q9H4Z2 1342 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-201ENST00000299267 CDC45O75419 566 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 FOSBP53539 338 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
GABRB3-201ENST00000299267 TRIM44Q96DX7 344 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-201ENST00000299267 MEIS3Q99687 375 aa12.4□□□□□ -0.42
GABRB3-201ENST00000299267 MTMR7Q9Y216 660 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 CDC42BPBQ9Y5S2 1711 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
GABRB3-201ENST00000299267 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 EFCAB6Q5THR3 1501 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 DDB1Q16531 1140 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 PHF14O94880 888 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
GABRB3-201ENST00000299267 ABCC3O15438 1527 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 TRPM2O94759 1503 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 IL2RBP14784 551 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 VAMP4O75379 141 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 RPAP2Q8IXW5 612 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-201ENST00000299267 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-201ENST00000299267 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 CFAP74Q9C0B2 1584 aa12.38□□□□□ -0.43
GABRB3-201ENST00000299267 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
GABRB3-201ENST00000299267 GBP4Q96PP9 640 aa12.37□□□□□ -0.43
GABRB3-201ENST00000299267 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
GABRB3-201ENST00000299267 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
GABRB3-201ENST00000299267 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-201ENST00000299267 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
GABRB3-201ENST00000299267 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
GABRB3-201ENST00000299267 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
GABRB3-201ENST00000299267 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
GABRB3-201ENST00000299267 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
GABRB3-201ENST00000299267 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 G2E3Q7L622 706 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 ANKRD13DQ6ZTN6 518 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
GABRB3-201ENST00000299267 NEK4P51957 841 aa12.35□□□□□ -0.43
GABRB3-201ENST00000299267 CWC27Q6UX04 472 aaKnown RBP12.35□□□□□ -0.43
GABRB3-201ENST00000299267 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
GABRB3-201ENST00000299267 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
GABRB3-201ENST00000299267 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
GABRB3-201ENST00000299267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-201ENST00000299267 LRRFIP1Q32MZ4 808 aaKnown RBP12.35□□□□□ -0.43
GABRB3-201ENST00000299267 ZPR1O75312 459 aa12.35□□□□□ -0.43
GABRB3-201ENST00000299267 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
GABRB3-201ENST00000299267 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms